RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPG1YBR079C TY1B-JR1P47098 1755 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-ML2Q03434 1755 aaKnown RBP5.74□□□□□ -1.49
RPG1YBR079C TY1B-ER1Q03612 1755 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-ML1Q04711 1755 aaKnown RBP5.74□□□□□ -1.49
RPG1YBR079C TY1B-GR2Q12269 1755 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-OLQ12273 1755 aa5.74□□□□□ -1.49
RPG1YBR079C TY1B-PLQ12414 1755 aaKnown RBP5.74□□□□□ -1.49
RPG1YBR079C DNF1P32660 1571 aa5.72□□□□□ -1.49
RPG1YBR079C TY1B-BRQ12193 1756 aa5.72□□□□□ -1.49
RPG1YBR079C TY1B-GR3Q12316 1755 aa5.72□□□□□ -1.49
RPG1YBR079C TY1B-ORQ92393 1755 aa5.72□□□□□ -1.49
RPG1YBR079C CDC25P04821 1589 aa5.71□□□□□ -1.5
RPG1YBR079C PDR10P51533 1564 aa5.71□□□□□ -1.5
RPG1YBR079C SEC3P33332 1336 aaKnown RBP5.71□□□□□ -1.5
RPG1YBR079C GDB1Q06625 1536 aa5.7□□□□□ -1.5
RPG1YBR079C ESC1Q03661 1658 aaKnown RBP5.7□□□□□ -1.5
RPG1YBR079C NOP7P53261 605 aaKnown RBP5.69□□□□□ -1.5
RPG1YBR079C PSD2P53037 1138 aaKnown RBP5.69□□□□□ -1.5
RPG1YBR079C YBT1P32386 1661 aa5.68□□□□□ -1.5
RPG1YBR079C SRB8P25648 1427 aa5.68□□□□□ -1.5
RPG1YBR079C GEA2P39993 1459 aaKnown RBP5.68□□□□□ -1.5
RPG1YBR079C CAT8P39113 1433 aa5.67□□□□□ -1.5
RPG1YBR079C PRS1P32895 427 aaKnown RBP5.67□□□□□ -1.5
RPG1YBR079C BUD21Q08492 214 aaPredicted RBP5.67□□□□□ -1.5
RPG1YBR079C TY1B-JR2P47100 1755 aaKnown RBP5.66□□□□□ -1.5
RPG1YBR079C TY1B-ER2Q03619 1755 aa5.66□□□□□ -1.5
RPG1YBR079C TY1B-MR1Q04214 1755 aa5.66□□□□□ -1.5
RPG1YBR079C TY1B-MR2Q04670 1755 aaKnown RBP5.66□□□□□ -1.5
RPG1YBR079C TY1B-LR1Q12088 1755 aaKnown RBP5.66□□□□□ -1.5
RPG1YBR079C TY1B-NL1Q12112 1755 aa5.66□□□□□ -1.5
RPG1YBR079C TY1B-GR1Q12141 1755 aa5.66□□□□□ -1.5
RPG1YBR079C TY1B-BLQ12490 1755 aa5.66□□□□□ -1.5
RPG1YBR079C ARO1P08566 1588 aaKnown RBP5.64□□□□□ -1.51
RPG1YBR079C IRC20Q06554 1556 aa5.64□□□□□ -1.51
RPG1YBR079C NUP159P40477 1460 aa5.64□□□□□ -1.51
RPG1YBR079C NUP157P40064 1391 aaKnown RBP5.62□□□□□ -1.51
RPG1YBR079C BUD3P25558 1636 aa5.62□□□□□ -1.51
RPG1YBR079C IQG1Q12280 1495 aa5.61□□□□□ -1.51
RPG1YBR079C MET10P39692 1035 aa5.61□□□□□ -1.51
RPG1YBR079C TFA1P36100 482 aa5.6□□□□□ -1.51
RPG1YBR079C PAF1P38351 445 aa5.6□□□□□ -1.51
RPG1YBR079C FUN12P39730 1002 aaKnown RBP5.6□□□□□ -1.51
RPG1YBR079C NTE1Q04958 1679 aa5.6□□□□□ -1.51
RPG1YBR079C MHP1P43638 1398 aa5.59□□□□□ -1.51
RPG1YBR079C RPO21P04050 1733 aaKnown RBP5.58□□□□□ -1.52
RPG1YBR079C NST1P53935 1240 aa5.58□□□□□ -1.52
RPG1YBR079C RPA190P10964 1664 aaKnown RBP5.58□□□□□ -1.52
RPG1YBR079C GCN2P15442 1659 aa5.57□□□□□ -1.52
RPG1YBR079C YSP2Q06681 1438 aa5.57□□□□□ -1.52
RPG1YBR079C TAF5P38129 798 aa5.57□□□□□ -1.52
RPG1YBR079C PDS5Q04264 1277 aa5.56□□□□□ -1.52
RPG1YBR079C CFT1Q06632 1357 aaKnown RBP5.56□□□□□ -1.52
RPG1YBR079C SPO14P36126 1683 aa5.54□□□□□ -1.52
RPG1YBR079C KIP3P53086 805 aaKnown RBP5.54□□□□□ -1.52
RPG1YBR079C MMS1Q06211 1407 aa5.54□□□□□ -1.52
RPG1YBR079C YLR419WQ06698 1435 aaKnown RBP5.54□□□□□ -1.52
RPG1YBR079C LTE1P07866 1435 aa5.53□□□□□ -1.52
RPG1YBR079C PDR12Q02785 1511 aa5.52□□□□□ -1.53
RPG1YBR079C BNR1P40450 1375 aa5.51□□□□□ -1.53
RPG1YBR079C PDR11P40550 1411 aa5.5□□□□□ -1.53
RPG1YBR079C PDR5P33302 1511 aaKnown RBP5.48□□□□□ -1.53
RPG1YBR079C RTC1Q08281 1341 aa5.48□□□□□ -1.53
RPG1YBR079C DRS2P39524 1355 aa5.48□□□□□ -1.53
RPG1YBR079C RAV1P47104 1357 aa5.47□□□□□ -1.53
RPG1YBR079C TY3B-IQ7LHG5 1498 aaKnown RBP5.47□□□□□ -1.53
RPG1YBR079C YOR093CQ12275 1648 aa5.47□□□□□ -1.53
RPG1YBR079C YRF1-1P0CX20 1796 aa5.47□□□□□ -1.53
RPG1YBR079C YRF1-5P0CX21 1796 aa5.47□□□□□ -1.53
RPG1YBR079C YRF1-8P0CX22 1796 aa5.47□□□□□ -1.53
RPG1YBR079C ESL2P36168 1195 aa5.46□□□□□ -1.53
RPG1YBR079C RPC31P17890 251 aa5.45□□□□□ -1.54
RPG1YBR079C RTG3P38165 486 aa5.45□□□□□ -1.54
RPG1YBR079C SPE2P21182 396 aa5.45□□□□□ -1.54
RPG1YBR079C YFR016CP43597 1233 aaKnown RBP5.44□□□□□ -1.54
RPG1YBR079C RVB2Q12464 471 aaKnown RBP5.44□□□□□ -1.54
RPG1YBR079C YPR148CQ06523 435 aa5.43□□□□□ -1.54
RPG1YBR079C YDL144CQ07589 356 aa5.42□□□□□ -1.54
RPG1YBR079C VPS27P40343 622 aaKnown RBP5.41□□□□□ -1.54
RPG1YBR079C CDC45Q08032 650 aa5.41□□□□□ -1.54
RPG1YBR079C TRK1P12685 1235 aa5.41□□□□□ -1.54
RPG1YBR079C TAF8Q03750 510 aa5.41□□□□□ -1.54
RPG1YBR079C YAP3P38749 330 aa5.41□□□□□ -1.54
RPG1YBR079C CHC1P22137 1653 aaKnown RBP5.4□□□□□ -1.54
RPG1YBR079C MET5P47169 1442 aa5.4□□□□□ -1.54
RPG1YBR079C VMR1P38735 1592 aa5.4□□□□□ -1.54
RPG1YBR079C PRI1P10363 409 aa5.4□□□□□ -1.54
RPG1YBR079C FPR3P38911 411 aaKnown RBP5.4□□□□□ -1.54
RPG1YBR079C CHZ1P40019 153 aaPredicted RBP5.4□□□□□ -1.54
RPG1YBR079C IME2P32581 645 aa5.4□□□□□ -1.55
RPG1YBR079C TYS1P36421 394 aaKnown RBP5.4□□□□□ -1.55
RPG1YBR079C MPP10P47083 593 aaKnown RBP5.39□□□□□ -1.55
RPG1YBR079C SEC7P11075 2009 aaKnown RBP5.39□□□□□ -1.55
RPG1YBR079C SUI2P20459 304 aaKnown RBP5.38□□□□□ -1.55
RPG1YBR079C IML1P47170 1584 aa5.38□□□□□ -1.55
RPG1YBR079C YEF3P16521 1044 aaKnown RBP5.38□□□□□ -1.55
RPG1YBR079C OPY1P38271 328 aa5.37□□□□□ -1.55
RPG1YBR079C RAD9P14737 1309 aa5.37□□□□□ -1.55
RPG1YBR079C NUP192P47054 1683 aa5.37□□□□□ -1.55
RPG1YBR079C RPP0P05317 312 aaKnown RBP5.37□□□□□ -1.55
RPG1YBR079C DOP1Q03921 1698 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms