RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeastyeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDS1YBR029C NUP42P49686 430 aaKnown RBP10.04□□□□□ -0.8
CDS1YBR029C VMA1P17255 1071 aaKnown RBP10.03□□□□□ -0.8
CDS1YBR029C ATH1P48016 1211 aa10.03□□□□□ -0.8
CDS1YBR029C ATF2P53296 535 aa10.02□□□□□ -0.8
CDS1YBR029C RLF2Q12495 606 aa10.02□□□□□ -0.8
CDS1YBR029C GRE2Q12068 342 aaKnown RBP10.01□□□□□ -0.81
CDS1YBR029C VHR2P40041 505 aa9.99□□□□□ -0.81
CDS1YBR029C GUT1P32190 709 aa9.98□□□□□ -0.81
CDS1YBR029C KIC1P38692 1080 aa9.96□□□□□ -0.82
CDS1YBR029C UBP14P38237 781 aaKnown RBP9.93□□□□□ -0.82
CDS1YBR029C GUA1P38625 525 aaKnown RBP9.9□□□□□ -0.82
CDS1YBR029C GTT3P39996 337 aa9.9□□□□□ -0.82
CDS1YBR029C YDR090CQ03193 310 aa9.9□□□□□ -0.82
CDS1YBR029C SAM3Q08986 587 aa9.89□□□□□ -0.83
CDS1YBR029C GYP5Q12344 894 aa9.89□□□□□ -0.83
CDS1YBR029C YLR326WQ06170 240 aaKnown RBP9.88□□□□□ -0.83
CDS1YBR029C YGR273CP53329 174 aa9.88□□□□□ -0.83
CDS1YBR029C YBL029C-AQ3E756 94 aa9.87□□□□□ -0.83
CDS1YBR029C RAD54P32863 898 aa9.86□□□□□ -0.83
CDS1YBR029C ABP1P15891 592 aaKnown RBP9.84□□□□□ -0.83
CDS1YBR029C KEX1P09620 729 aa9.82□□□□□ -0.84
CDS1YBR029C HPC2Q01448 625 aa9.81□□□□□ -0.84
CDS1YBR029C PSE1P32337 1089 aaKnown RBP9.8□□□□□ -0.84
CDS1YBR029C VNX1P42839 908 aa9.8□□□□□ -0.84
CDS1YBR029C DCW1P36091 449 aa9.79□□□□□ -0.84
CDS1YBR029C PCS60P38137 543 aaKnown RBP RIP-Chip data9.79□□□□□ -0.84not detected
CDS1YBR029C BRL1P38770 471 aa9.76□□□□□ -0.85
CDS1YBR029C SOL3P38858 249 aa9.76□□□□□ -0.85
CDS1YBR029C SSA2P10592 639 aaKnown RBP9.75□□□□□ -0.85
CDS1YBR029C YOL036WQ08206 761 aa9.75□□□□□ -0.85
CDS1YBR029C HTA1P04911 132 aaKnown RBP9.74□□□□□ -0.85
CDS1YBR029C HTA2P04912 132 aa9.74□□□□□ -0.85
CDS1YBR029C TFB3Q03290 321 aa9.74□□□□□ -0.85
CDS1YBR029C SET4P42948 560 aa9.73□□□□□ -0.85
CDS1YBR029C CSN12P47130 423 aa9.73□□□□□ -0.85
CDS1YBR029C TEA1P47988 759 aa9.71□□□□□ -0.86
CDS1YBR029C SPP1Q03012 353 aa9.7□□□□□ -0.86
CDS1YBR029C ORC6P38826 435 aa9.67□□□□□ -0.86
CDS1YBR029C MSB4Q12317 492 aa9.67□□□□□ -0.86
CDS1YBR029C AI4P03878 556 aa9.66□□□□□ -0.86
CDS1YBR029C MPH3P0CE00 602 aa9.66□□□□□ -0.86
CDS1YBR029C RPP1BP10622 106 aaKnown RBP9.66□□□□□ -0.86
CDS1YBR029C NST1P53935 1240 aa9.65□□□□□ -0.86
CDS1YBR029C CLB5P30283 435 aa9.63□□□□□ -0.87
CDS1YBR029C RGR1P19263 1082 aa9.63□□□□□ -0.87
CDS1YBR029C PKC1P24583 1151 aa9.61□□□□□ -0.87
CDS1YBR029C TIF11P38912 153 aaKnown RBP9.61□□□□□ -0.87
CDS1YBR029C YEL023CP39992 682 aa9.61□□□□□ -0.87
CDS1YBR029C WSC3Q12215 556 aa9.61□□□□□ -0.87
CDS1YBR029C MVP1P40959 511 aaKnown RBP9.6□□□□□ -0.87
CDS1YBR029C EAP1P36041 632 aaKnown RBP9.59□□□□□ -0.87
CDS1YBR029C DAN4P47179 1161 aa9.59□□□□□ -0.87
CDS1YBR029C YJL007CP47080 104 aa9.58□□□□□ -0.88
CDS1YBR029C CSC1Q06538 782 aa9.58□□□□□ -0.88
CDS1YBR029C AIR2Q12476 344 aaKnown RBP9.58□□□□□ -0.88
CDS1YBR029C ILV3P39522 585 aaKnown RBP9.57□□□□□ -0.88
CDS1YBR029C FKH1P40466 484 aa9.57□□□□□ -0.88
CDS1YBR029C SLI15P38283 698 aa9.56□□□□□ -0.88
CDS1YBR029C YMR196WQ04336 1088 aa9.56□□□□□ -0.88
CDS1YBR029C PTC4P38089 393 aa9.55□□□□□ -0.88
CDS1YBR029C TYW1Q08960 810 aaKnown RBP9.55□□□□□ -0.88
CDS1YBR029C BIM1P40013 344 aa9.54□□□□□ -0.88
CDS1YBR029C PEX21P50091 288 aa9.53□□□□□ -0.88
CDS1YBR029C KTR1P27810 393 aaKnown RBP9.52□□□□□ -0.88
CDS1YBR029C GLN1P32288 370 aaKnown RBP9.52□□□□□ -0.88
CDS1YBR029C YJL171CP46992 396 aa9.52□□□□□ -0.88
CDS1YBR029C YPR109WQ06104 294 aa9.52□□□□□ -0.88
CDS1YBR029C RPL34BP40525 121 aaKnown RBP9.51□□□□□ -0.89
CDS1YBR029C GAP1P19145 602 aaPredicted RBP9.5□□□□□ -0.89
CDS1YBR029C NIS1P53939 407 aa9.5□□□□□ -0.89
CDS1YBR029C TRP5P00931 707 aaKnown RBP9.5□□□□□ -0.89
CDS1YBR029C YBL036CP38197 257 aa9.5□□□□□ -0.89
CDS1YBR029C FPK1P53739 893 aa9.5□□□□□ -0.89
CDS1YBR029C TFB4Q12004 338 aa9.5□□□□□ -0.89
CDS1YBR029C HST2P53686 357 aa9.49□□□□□ -0.89
CDS1YBR029C JIP4Q03361 876 aa9.49□□□□□ -0.89
CDS1YBR029C MMP1Q12372 583 aa9.49□□□□□ -0.89
CDS1YBR029C CDC73Q06697 393 aa9.48□□□□□ -0.89
CDS1YBR029C ATG32P40458 529 aa9.47□□□□□ -0.89
CDS1YBR029C PKH3Q03306 898 aaPredicted RBP9.46□□□□□ -0.9
CDS1YBR029C ULI1P43604 169 aa9.44□□□□□ -0.9
CDS1YBR029C TUM1Q08686 304 aaKnown RBP9.44□□□□□ -0.9
CDS1YBR029C ESS1P22696 170 aa9.43□□□□□ -0.9
CDS1YBR029C IOC2Q12072 812 aa9.42□□□□□ -0.9
CDS1YBR029C TIF1P10081 395 aaKnown RBP9.41□□□□□ -0.9
CDS1YBR029C SCJ1P25303 377 aa9.41□□□□□ -0.9
CDS1YBR029C CSE4P36012 229 aa9.41□□□□□ -0.9
CDS1YBR029C RAD59Q12223 238 aa9.41□□□□□ -0.9
CDS1YBR029C LDB19Q12502 818 aa9.41□□□□□ -0.9
CDS1YBR029C SSA1P10591 642 aaKnown RBP9.39□□□□□ -0.91
CDS1YBR029C DPL1Q05567 589 aa9.39□□□□□ -0.91
CDS1YBR029C SUB2Q07478 446 aaKnown RBP9.39□□□□□ -0.91
CDS1YBR029C ARG8P18544 423 aa9.38□□□□□ -0.91
CDS1YBR029C SSA4P22202 642 aaKnown RBP9.38□□□□□ -0.91
CDS1YBR029C SIT4P20604 311 aa9.37□□□□□ -0.91
CDS1YBR029C PML39Q03760 334 aa9.37□□□□□ -0.91
CDS1YBR029C BMT6Q12291 365 aa9.37□□□□□ -0.91
CDS1YBR029C YJU3P28321 313 aa9.36□□□□□ -0.91
CDS1YBR029C RTG2P32608 588 aaKnown RBP9.36□□□□□ -0.91
CDS1YBR029C MID1P41821 548 aa9.36□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms