RNA–Protein interactions for RNA: YBL105C

PKC1, Transcript of Protein serine/threonine kinase, yeastyeast

Gene PKC1, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKC1YBL105C YRF1-1P0CX20 1796 aa9.07□□□□□ -0.96
PKC1YBL105C YRF1-5P0CX21 1796 aa9.07□□□□□ -0.96
PKC1YBL105C YRF1-8P0CX22 1796 aa9.07□□□□□ -0.96
PKC1YBL105C SPP41P38904 1435 aa9.04□□□□□ -0.96
PKC1YBL105C PAN1P32521 1480 aa9.01□□□□□ -0.97
PKC1YBL105C PDR10P51533 1564 aa8.99□□□□□ -0.97
PKC1YBL105C TSC11P40061 1430 aa8.98□□□□□ -0.97
PKC1YBL105C IKI3Q06706 1349 aaKnown RBP8.95□□□□□ -0.98
PKC1YBL105C SPO14P36126 1683 aa8.95□□□□□ -0.98
PKC1YBL105C GEA1P47102 1408 aaPredicted RBP8.93□□□□□ -0.98
PKC1YBL105C RSE1Q04693 1361 aaKnown RBP8.92□□□□□ -0.98
PKC1YBL105C ARO1P08566 1588 aaKnown RBP8.9□□□□□ -0.98
PKC1YBL105C SSM4P40318 1319 aa8.88□□□□□ -0.99
PKC1YBL105C PDR12Q02785 1511 aa8.88□□□□□ -0.99
PKC1YBL105C STH1P32597 1359 aa8.87□□□□□ -0.99
PKC1YBL105C GDB1Q06625 1536 aa8.87□□□□□ -0.99
PKC1YBL105C GEA2P39993 1459 aaKnown RBP8.85□□□□□ -0.99
PKC1YBL105C GCN2P15442 1659 aa8.85□□□□□ -0.99
PKC1YBL105C VPS15P22219 1454 aa8.82□□□□□ -1
PKC1YBL105C PDR5P33302 1511 aaKnown RBP8.8□□□□□ -1
PKC1YBL105C CAT8P39113 1433 aa8.76□□□□□ -1.01
PKC1YBL105C CHC1P22137 1653 aaKnown RBP8.72□□□□□ -1.01
PKC1YBL105C YOR093CQ12275 1648 aa8.72□□□□□ -1.01
PKC1YBL105C NUP159P40477 1460 aa8.71□□□□□ -1.01
PKC1YBL105C SAS10Q12136 610 aaPredicted RBP8.71□□□□□ -1.02
PKC1YBL105C BUD3P25558 1636 aa8.71□□□□□ -1.02
PKC1YBL105C IQG1Q12280 1495 aa8.66□□□□□ -1.02
PKC1YBL105C VMR1P38735 1592 aa8.64□□□□□ -1.03
PKC1YBL105C TAF7Q05021 590 aa8.64□□□□□ -1.03
PKC1YBL105C DOP1Q03921 1698 aa8.62□□□□□ -1.03
PKC1YBL105C MET5P47169 1442 aa8.61□□□□□ -1.03
PKC1YBL105C YSP2Q06681 1438 aa8.61□□□□□ -1.03
PKC1YBL105C SEC7P11075 2009 aaKnown RBP8.6□□□□□ -1.03
PKC1YBL105C NUP192P47054 1683 aa8.59□□□□□ -1.03
PKC1YBL105C SRB8P25648 1427 aa8.57□□□□□ -1.04
PKC1YBL105C NUP188P52593 1655 aaKnown RBP8.54□□□□□ -1.04
PKC1YBL105C BNI1P41832 1953 aa8.54□□□□□ -1.04
PKC1YBL105C DNF2Q12675 1612 aa8.49□□□□□ -1.05
PKC1YBL105C IFH1P39520 1085 aa8.49□□□□□ -1.05
PKC1YBL105C TY3B-IQ7LHG5 1498 aaKnown RBP8.48□□□□□ -1.05
PKC1YBL105C NUP157P40064 1391 aaKnown RBP8.46□□□□□ -1.06
PKC1YBL105C PDR11P40550 1411 aa8.44□□□□□ -1.06
PKC1YBL105C MMS1Q06211 1407 aa8.4□□□□□ -1.06
PKC1YBL105C LTE1P07866 1435 aa8.39□□□□□ -1.07
PKC1YBL105C NSR1P27476 414 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
PKC1YBL105C IML1P47170 1584 aa8.38□□□□□ -1.07
PKC1YBL105C RQC2Q12532 1038 aaKnown RBP8.36□□□□□ -1.07
PKC1YBL105C MET10P39692 1035 aa8.35□□□□□ -1.07
PKC1YBL105C YLR419WQ06698 1435 aaKnown RBP8.33□□□□□ -1.08
PKC1YBL105C TRM3Q07527 1436 aa8.33□□□□□ -1.08
PKC1YBL105C HAP1P0CE41 1502 aa8.31□□□□□ -1.08
PKC1YBL105C RTT106P40161 455 aa8.3□□□□□ -1.08
PKC1YBL105C TY1B-NL2Q99337 1749 aaKnown RBP8.27□□□□□ -1.09
PKC1YBL105C RAV1P47104 1357 aa8.26□□□□□ -1.09
PKC1YBL105C BNR1P40450 1375 aa8.24□□□□□ -1.09
PKC1YBL105C MLP1Q02455 1875 aaKnown RBP8.24□□□□□ -1.09
PKC1YBL105C DNF3Q12674 1656 aa8.19□□□□□ -1.1
PKC1YBL105C RTC1Q08281 1341 aa8.18□□□□□ -1.1
PKC1YBL105C CKB1P43639 278 aa8.16□□□□□ -1.1
PKC1YBL105C YIL177CP40434 1758 aa8.15□□□□□ -1.1
PKC1YBL105C YJL225CP40889 1758 aa8.15□□□□□ -1.1
PKC1YBL105C DRS2P39524 1355 aa8.14□□□□□ -1.11
PKC1YBL105C SPT7P35177 1332 aa8.14□□□□□ -1.11
PKC1YBL105C BCK1Q01389 1478 aa8.14□□□□□ -1.11
PKC1YBL105C POL5P39985 1022 aaKnown RBP8.13□□□□□ -1.11
PKC1YBL105C BUD21Q08492 214 aaPredicted RBP8.12□□□□□ -1.11
PKC1YBL105C MHP1P43638 1398 aa8.11□□□□□ -1.11
PKC1YBL105C SNF2P22082 1703 aa8.11□□□□□ -1.11
PKC1YBL105C SEC3P33332 1336 aaKnown RBP8.07□□□□□ -1.12
PKC1YBL105C ENP1P38333 483 aaKnown RBP8.07□□□□□ -1.12
PKC1YBL105C TY4B-HP0C2J7 1802 aa8.06□□□□□ -1.12
PKC1YBL105C TY4B-JP47024 1803 aa8.06□□□□□ -1.12
PKC1YBL105C PRS1P32895 427 aaKnown RBP8.05□□□□□ -1.12
PKC1YBL105C USO1P25386 1790 aa8.05□□□□□ -1.12
PKC1YBL105C YML133CQ03099 1374 aa8.04□□□□□ -1.12
PKC1YBL105C YLL067CQ07888 1374 aa8.04□□□□□ -1.12
PKC1YBL105C YLL066CQ99208 1374 aa8.04□□□□□ -1.12
PKC1YBL105C NST1P53935 1240 aa8.02□□□□□ -1.12
PKC1YBL105C BFR2Q06631 534 aaKnown RBP8.02□□□□□ -1.12
PKC1YBL105C APC1P53886 1748 aa8.01□□□□□ -1.13
PKC1YBL105C MTC1P47018 478 aaKnown RBP7.99□□□□□ -1.13
PKC1YBL105C ITT1Q04638 464 aa7.98□□□□□ -1.13
PKC1YBL105C RRP5Q05022 1729 aaKnown RBP7.98□□□□□ -1.13
PKC1YBL105C PSD2P53037 1138 aaKnown RBP7.97□□□□□ -1.13
PKC1YBL105C YAP3P38749 330 aa7.95□□□□□ -1.14
PKC1YBL105C TYS1P36421 394 aaKnown RBP7.95□□□□□ -1.14
PKC1YBL105C NOP2P40991 618 aaKnown RBP7.94□□□□□ -1.14
PKC1YBL105C NOP7P53261 605 aaKnown RBP7.93□□□□□ -1.14
PKC1YBL105C RAD9P14737 1309 aa7.93□□□□□ -1.14
PKC1YBL105C YRF1-2P40105 1681 aa7.93□□□□□ -1.14
PKC1YBL105C URB1P34241 1764 aaKnown RBP7.91□□□□□ -1.14
PKC1YBL105C CFT1Q06632 1357 aaKnown RBP7.91□□□□□ -1.14
PKC1YBL105C IPL1P38991 367 aa7.9□□□□□ -1.14
PKC1YBL105C IOC4Q04213 475 aa7.89□□□□□ -1.15
PKC1YBL105C FKS3Q04952 1785 aa7.88□□□□□ -1.15
PKC1YBL105C TAF5P38129 798 aa7.87□□□□□ -1.15
PKC1YBL105C YEF3P16521 1044 aaKnown RBP7.86□□□□□ -1.15
PKC1YBL105C ESL2P36168 1195 aa7.86□□□□□ -1.15
PKC1YBL105C PAF1P38351 445 aa7.84□□□□□ -1.15
PKC1YBL105C KIP3P53086 805 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms