RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C NUP159P40477 1460 aa20.71■□□□□ 0.91
SSA1YAL005C RPO21P04050 1733 aaKnown RBP20.7■□□□□ 0.9
SSA1YAL005C SNT2P53127 1403 aa20.69■□□□□ 0.9
SSA1YAL005C MLP2P40457 1679 aa20.68■□□□□ 0.9
SSA1YAL005C YRF1-1P0CX20 1796 aa20.64■□□□□ 0.89
SSA1YAL005C YRF1-5P0CX21 1796 aa20.64■□□□□ 0.89
SSA1YAL005C YRF1-8P0CX22 1796 aa20.64■□□□□ 0.89
SSA1YAL005C ULS1Q08562 1619 aa20.63■□□□□ 0.89
SSA1YAL005C PDR15Q04182 1529 aaKnown RBP20.62■□□□□ 0.89
SSA1YAL005C TAF7Q05021 590 aa20.54■□□□□ 0.88
SSA1YAL005C VPS15P22219 1454 aa20.46■□□□□ 0.87
SSA1YAL005C LTE1P07866 1435 aa20.45■□□□□ 0.86
SSA1YAL005C RTT106P40161 455 aa20.44■□□□□ 0.86
SSA1YAL005C GEA2P39993 1459 aaKnown RBP20.44■□□□□ 0.86
SSA1YAL005C IFH1P39520 1085 aa20.41■□□□□ 0.86
SSA1YAL005C IRC20Q06554 1556 aa20.36■□□□□ 0.85
SSA1YAL005C GEA1P47102 1408 aaPredicted RBP20.36■□□□□ 0.85
SSA1YAL005C MET10P39692 1035 aa20.35■□□□□ 0.85
SSA1YAL005C SPO14P36126 1683 aa20.33■□□□□ 0.85
SSA1YAL005C PDR12Q02785 1511 aa20.31■□□□□ 0.84
SSA1YAL005C TY3B-GQ99315 1547 aa20.26■□□□□ 0.83
SSA1YAL005C GDB1Q06625 1536 aa20.22■□□□□ 0.83
SSA1YAL005C BNI1P41832 1953 aa20.2■□□□□ 0.82
SSA1YAL005C NUP157P40064 1391 aaKnown RBP20.17■□□□□ 0.82
SSA1YAL005C YBT1P32386 1661 aa20.15■□□□□ 0.82
SSA1YAL005C PDR10P51533 1564 aa20.14■□□□□ 0.82
SSA1YAL005C ITT1Q04638 464 aa20.14■□□□□ 0.81
SSA1YAL005C CAT8P39113 1433 aa20.1■□□□□ 0.81
SSA1YAL005C DRS2P39524 1355 aa20.1■□□□□ 0.81
SSA1YAL005C NUP170P38181 1502 aa20.09■□□□□ 0.81
SSA1YAL005C IQG1Q12280 1495 aa20.03■□□□□ 0.8
SSA1YAL005C ARO1P08566 1588 aaKnown RBP19.96■□□□□ 0.79
SSA1YAL005C IKI3Q06706 1349 aaKnown RBP19.92■□□□□ 0.78
SSA1YAL005C BUD3P25558 1636 aa19.91■□□□□ 0.78
SSA1YAL005C CKB1P43639 278 aa19.88■□□□□ 0.77
SSA1YAL005C MMS1Q06211 1407 aa19.88■□□□□ 0.77
SSA1YAL005C DOP1Q03921 1698 aa19.84■□□□□ 0.77
SSA1YAL005C YSP2Q06681 1438 aa19.83■□□□□ 0.77
SSA1YAL005C TRM3Q07527 1436 aa19.8■□□□□ 0.76
SSA1YAL005C SRB8P25648 1427 aa19.76■□□□□ 0.75
SSA1YAL005C SEC7P11075 2009 aaKnown RBP19.75■□□□□ 0.75
SSA1YAL005C SSM4P40318 1319 aa19.74■□□□□ 0.75
SSA1YAL005C CHC1P22137 1653 aaKnown RBP19.68■□□□□ 0.74
SSA1YAL005C BNR1P40450 1375 aa19.65■□□□□ 0.74
SSA1YAL005C DNF2Q12675 1612 aa19.64■□□□□ 0.74
SSA1YAL005C BUD21Q08492 214 aaPredicted RBP19.53■□□□□ 0.72
SSA1YAL005C ABP1P15891 592 aaKnown RBP19.48■□□□□ 0.71
SSA1YAL005C YOR093CQ12275 1648 aa19.39■□□□□ 0.7
SSA1YAL005C GCN2P15442 1659 aa19.29■□□□□ 0.68
SSA1YAL005C VMR1P38735 1592 aa19.25■□□□□ 0.67
SSA1YAL005C NUP188P52593 1655 aaKnown RBP19.24■□□□□ 0.67
SSA1YAL005C YAP3P38749 330 aa19.22■□□□□ 0.67
SSA1YAL005C MIF2P35201 549 aa19.16■□□□□ 0.66
SSA1YAL005C PDR5P33302 1511 aaKnown RBP19.16■□□□□ 0.66
SSA1YAL005C DNF3Q12674 1656 aa19.16■□□□□ 0.66
SSA1YAL005C URN1Q06525 465 aaKnown RBP19.15■□□□□ 0.66
SSA1YAL005C IML1P47170 1584 aa19.11■□□□□ 0.65
SSA1YAL005C IPL1P38991 367 aa19.11■□□□□ 0.65
SSA1YAL005C TYS1P36421 394 aaKnown RBP19.09■□□□□ 0.65
SSA1YAL005C PDR11P40550 1411 aa19.09■□□□□ 0.65
SSA1YAL005C PAF1P38351 445 aa18.92■□□□□ 0.62
SSA1YAL005C HAP1P0CE41 1502 aa18.91■□□□□ 0.62
SSA1YAL005C MAK10Q02197 733 aa18.9■□□□□ 0.62
SSA1YAL005C RAV1P47104 1357 aa18.9■□□□□ 0.62
SSA1YAL005C NOP7P53261 605 aaKnown RBP18.87■□□□□ 0.61
SSA1YAL005C BFR2Q06631 534 aaKnown RBP18.87■□□□□ 0.61
SSA1YAL005C RTC1Q08281 1341 aa18.8■□□□□ 0.6
SSA1YAL005C NUP192P47054 1683 aa18.74■□□□□ 0.59
SSA1YAL005C USO1P25386 1790 aa18.71■□□□□ 0.59
SSA1YAL005C YFR006WP43590 535 aa18.64■□□□□ 0.57
SSA1YAL005C BCK1Q01389 1478 aa18.61■□□□□ 0.57
SSA1YAL005C RAD9P14737 1309 aa18.6■□□□□ 0.57
SSA1YAL005C KRE5P22023 1365 aa18.6■□□□□ 0.57
SSA1YAL005C TY1B-NL2Q99337 1749 aaKnown RBP18.57■□□□□ 0.56
SSA1YAL005C TAF5P38129 798 aa18.57■□□□□ 0.56
SSA1YAL005C ALD4P46367 519 aaKnown RBP18.56■□□□□ 0.56
SSA1YAL005C CAB1Q04430 367 aa18.54■□□□□ 0.56
SSA1YAL005C ESL2P36168 1195 aa18.52■□□□□ 0.56
SSA1YAL005C CFT1Q06632 1357 aaKnown RBP18.52■□□□□ 0.55
SSA1YAL005C MRX12P47084 519 aa18.51■□□□□ 0.55
SSA1YAL005C RIA1P53893 1110 aa18.5■□□□□ 0.55
SSA1YAL005C YMR196WQ04336 1088 aa18.45■□□□□ 0.54
SSA1YAL005C TY3B-IQ7LHG5 1498 aaKnown RBP18.44■□□□□ 0.54
SSA1YAL005C THI12P42883 340 aa18.43■□□□□ 0.54
SSA1YAL005C THI5P43534 340 aa18.43■□□□□ 0.54
SSA1YAL005C THI11P47183 340 aa18.43■□□□□ 0.54
SSA1YAL005C THI13Q07748 340 aa18.43■□□□□ 0.54
SSA1YAL005C ORC1P54784 914 aaPredicted RBP18.4■□□□□ 0.54
SSA1YAL005C TAF8Q03750 510 aa18.4■□□□□ 0.54
SSA1YAL005C YNR029CP53729 429 aaKnown RBP18.37■□□□□ 0.53
SSA1YAL005C KIP3P53086 805 aaKnown RBP18.36■□□□□ 0.53
SSA1YAL005C SPE2P21182 396 aa18.29■□□□□ 0.52
SSA1YAL005C YLR419WQ06698 1435 aaKnown RBP18.29■□□□□ 0.52
SSA1YAL005C POL5P39985 1022 aaKnown RBP18.29■□□□□ 0.52
SSA1YAL005C NAP1P25293 417 aaKnown RBP18.27■□□□□ 0.52
SSA1YAL005C TFA1P36100 482 aa18.25■□□□□ 0.51
SSA1YAL005C RCM1P53972 490 aa18.19■□□□□ 0.5
SSA1YAL005C PPH3P32345 308 aa18.15■□□□□ 0.5
SSA1YAL005C CPS1P27614 576 aa18.13■□□□□ 0.49
SSA1YAL005C CHZ1P40019 153 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms