RNA–Protein interactions for RNA: ENST00000642018.1

CASC19-274, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 970 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-274ENST00000642018 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
CASC19-274ENST00000642018 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
CASC19-274ENST00000642018 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
CASC19-274ENST00000642018 MIER1Q8N108 512 aa12.53□□□□□ -0.4
CASC19-274ENST00000642018 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
CASC19-274ENST00000642018 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
CASC19-274ENST00000642018 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
CASC19-274ENST00000642018 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
CASC19-274ENST00000642018 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
CASC19-274ENST00000642018 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
CASC19-274ENST00000642018 KIF21AQ7Z4S6 1674 aa12.44□□□□□ -0.42
CASC19-274ENST00000642018 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
CASC19-274ENST00000642018 MRC2Q9UBG0 1479 aa12.41□□□□□ -0.42
CASC19-274ENST00000642018 WDR62O43379 1518 aa12.37□□□□□ -0.43
CASC19-274ENST00000642018 MROH2BQ7Z745 1585 aa12.37□□□□□ -0.43
CASC19-274ENST00000642018 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
CASC19-274ENST00000642018 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
CASC19-274ENST00000642018 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
CASC19-274ENST00000642018 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
CASC19-274ENST00000642018 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
CASC19-274ENST00000642018 CFTRP13569 1480 aa12.22□□□□□ -0.45
CASC19-274ENST00000642018 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
CASC19-274ENST00000642018 SLC24A1O60721 1099 aa12.19□□□□□ -0.46
CASC19-274ENST00000642018 WIZO95785 1651 aa12.19□□□□□ -0.46
CASC19-274ENST00000642018 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
CASC19-274ENST00000642018 PKD2Q13563 968 aa12.18□□□□□ -0.46
CASC19-274ENST00000642018 GSE1Q14687 1217 aa12.17□□□□□ -0.46
CASC19-274ENST00000642018 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
CASC19-274ENST00000642018 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
CASC19-274ENST00000642018 URB2Q14146 1524 aaKnown RBP12.13□□□□□ -0.47
CASC19-274ENST00000642018 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
CASC19-274ENST00000642018 IFT140Q96RY7 1462 aa12.1□□□□□ -0.47
CASC19-274ENST00000642018 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
CASC19-274ENST00000642018 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
CASC19-274ENST00000642018 TOP2AP11388 1531 aaKnown RBP12.07□□□□□ -0.48
CASC19-274ENST00000642018 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
CASC19-274ENST00000642018 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
CASC19-274ENST00000642018 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
CASC19-274ENST00000642018 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
CASC19-274ENST00000642018 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
CASC19-274ENST00000642018 ZNF608Q9ULD9 1512 aaPredicted RBP12.01□□□□□ -0.49
CASC19-274ENST00000642018 NUBP1P53384 320 aa12.01□□□□□ -0.49
CASC19-274ENST00000642018 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
CASC19-274ENST00000642018 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
CASC19-274ENST00000642018 RGL2O15211 777 aa11.95□□□□□ -0.5
CASC19-274ENST00000642018 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
CASC19-274ENST00000642018 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
CASC19-274ENST00000642018 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
CASC19-274ENST00000642018 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
CASC19-274ENST00000642018 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
CASC19-274ENST00000642018 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
CASC19-274ENST00000642018 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
CASC19-274ENST00000642018 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
CASC19-274ENST00000642018 FARP1Q9Y4F1 1045 aaPredicted RBP11.92□□□□□ -0.5
CASC19-274ENST00000642018 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.53e-6■■■■□ 24.7
CASC19-274ENST00000642018 ARAP1Q96P48 1450 aa11.91□□□□□ -0.5
CASC19-274ENST00000642018 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
CASC19-274ENST00000642018 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
CASC19-274ENST00000642018 RASEFQ8IZ41 740 aa11.89□□□□□ -0.51
CASC19-274ENST00000642018 CHD1O14646 1710 aa11.89□□□□□ -0.51
CASC19-274ENST00000642018 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
CASC19-274ENST00000642018 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
CASC19-274ENST00000642018 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
CASC19-274ENST00000642018 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
CASC19-274ENST00000642018 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
CASC19-274ENST00000642018 TSPYL2Q9H2G4 693 aaPredicted RBP11.85□□□□□ -0.51
CASC19-274ENST00000642018 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
CASC19-274ENST00000642018 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
CASC19-274ENST00000642018 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
CASC19-274ENST00000642018 SOGA1O94964 1423 aa11.84□□□□□ -0.51
CASC19-274ENST00000642018 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
CASC19-274ENST00000642018 PIP4P2Q8N4L2 257 aa11.82□□□□□ -0.52
CASC19-274ENST00000642018 TDRD9Q8NDG6 1382 aaKnown RBP11.81□□□□□ -0.52
CASC19-274ENST00000642018 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
CASC19-274ENST00000642018 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
CASC19-274ENST00000642018 PYGBP11216 843 aa11.81□□□□□ -0.52
CASC19-274ENST00000642018 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
CASC19-274ENST00000642018 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
CASC19-274ENST00000642018 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
CASC19-274ENST00000642018 SNAPC4Q5SXM2 1469 aa11.77□□□□□ -0.52
CASC19-274ENST00000642018 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
CASC19-274ENST00000642018 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
CASC19-274ENST00000642018 SPRYD3Q8NCJ5 442 aa11.77□□□□□ -0.53
CASC19-274ENST00000642018 GRIN2BQ13224 1484 aa11.76□□□□□ -0.53
CASC19-274ENST00000642018 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
CASC19-274ENST00000642018 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
CASC19-274ENST00000642018 SYNJ2O15056 1496 aa11.76□□□□□ -0.53
CASC19-274ENST00000642018 STK25O00506 426 aa11.74□□□□□ -0.53
CASC19-274ENST00000642018 GAPVD1Q14C86 1478 aa11.72□□□□□ -0.53
CASC19-274ENST00000642018 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
CASC19-274ENST00000642018 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
CASC19-274ENST00000642018 RYDENQ9NUL5 291 aaKnown RBP11.69□□□□□ -0.54
CASC19-274ENST00000642018 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
CASC19-274ENST00000642018 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
CASC19-274ENST00000642018 HAX1O00165 279 aa11.66□□□□□ -0.54
CASC19-274ENST00000642018 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms