RNA–Protein interactions for RNA: ENST00000641953.1

CASC19-268, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-268ENST00000641953 BAZ1AQ9NRL2 1556 aaPredicted RBP10.62□□□□□ -0.71
CASC19-268ENST00000641953 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
CASC19-268ENST00000641953 PEG3Q9GZU2 1588 aa10.6□□□□□ -0.71
CASC19-268ENST00000641953 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
CASC19-268ENST00000641953 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
CASC19-268ENST00000641953 SLC4A1APQ9BWU0 796 aaKnown RBP10.56□□□□□ -0.72
CASC19-268ENST00000641953 MROH2BQ7Z745 1585 aa10.53□□□□□ -0.72
CASC19-268ENST00000641953 CC2D2AQ9P2K1 1620 aa10.53□□□□□ -0.72
CASC19-268ENST00000641953 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
CASC19-268ENST00000641953 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
CASC19-268ENST00000641953 MAMSTRQ6ZN01 415 aa10.49□□□□□ -0.73
CASC19-268ENST00000641953 LCE2DQ5TA82 110 aaPredicted RBP10.47□□□□□ -0.73
CASC19-268ENST00000641953 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
CASC19-268ENST00000641953 ATAD2BQ9ULI0 1458 aa10.47□□□□□ -0.73
CASC19-268ENST00000641953 RSF1Q96T23 1441 aaPredicted RBP10.46□□□□□ -0.74
CASC19-268ENST00000641953 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
CASC19-268ENST00000641953 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
CASC19-268ENST00000641953 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
CASC19-268ENST00000641953 WIZO95785 1651 aa10.41□□□□□ -0.74
CASC19-268ENST00000641953 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
CASC19-268ENST00000641953 TOP2AP11388 1531 aaKnown RBP10.39□□□□□ -0.75
CASC19-268ENST00000641953 POTEJP0CG39 1038 aa10.39□□□□□ -0.75
CASC19-268ENST00000641953 C7P10643 843 aa10.39□□□□□ -0.75
CASC19-268ENST00000641953 SLC39A7Q92504 469 aa10.38□□□□□ -0.75
CASC19-268ENST00000641953 BAZ1BQ9UIG0 1483 aaKnown RBP10.37□□□□□ -0.75
CASC19-268ENST00000641953 ZBTB22O15209 634 aa10.36□□□□□ -0.75
CASC19-268ENST00000641953 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
CASC19-268ENST00000641953 SCUBE2Q9NQ36 999 aa10.36□□□□□ -0.75
CASC19-268ENST00000641953 CDAN1Q8IWY9 1227 aa10.33□□□□□ -0.76
CASC19-268ENST00000641953 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
CASC19-268ENST00000641953 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
CASC19-268ENST00000641953 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
CASC19-268ENST00000641953 MS4A3Q96HJ5 214 aa10.2□□□□□ -0.78
CASC19-268ENST00000641953 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
CASC19-268ENST00000641953 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
CASC19-268ENST00000641953 PRDM2Q13029 1718 aa10.17□□□□□ -0.78
CASC19-268ENST00000641953 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
CASC19-268ENST00000641953 CCDC88BA6NC98 1476 aa10.17□□□□□ -0.78
CASC19-268ENST00000641953 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
CASC19-268ENST00000641953 CFTRP13569 1480 aa10.14□□□□□ -0.79
CASC19-268ENST00000641953 ATN1P54259 1190 aaPredicted RBP10.12□□□□□ -0.79
CASC19-268ENST00000641953 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
CASC19-268ENST00000641953 CADPSQ9ULU8 1353 aa10.08□□□□□ -0.8
CASC19-268ENST00000641953 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
CASC19-268ENST00000641953 NESP48681 1621 aa10.07□□□□□ -0.8
CASC19-268ENST00000641953 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
CASC19-268ENST00000641953 THOC2Q8NI27 1593 aaKnown RBP10.04□□□□□ -0.8
CASC19-268ENST00000641953 KIF21AQ7Z4S6 1674 aa10.03□□□□□ -0.8
CASC19-268ENST00000641953 ST18O60284 1047 aa10.03□□□□□ -0.8
CASC19-268ENST00000641953 MNX1P50219 401 aaPredicted RBP10.02□□□□□ -0.81
CASC19-268ENST00000641953 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
CASC19-268ENST00000641953 FANCD2Q9BXW9 1451 aa9.99□□□□□ -0.81
CASC19-268ENST00000641953 SEC24BO95487 1268 aa9.99□□□□□ -0.81
CASC19-268ENST00000641953 CEP164Q9UPV0 1460 aa9.98□□□□□ -0.81
CASC19-268ENST00000641953 WDR62O43379 1518 aa9.98□□□□□ -0.81
CASC19-268ENST00000641953 BMP2KQ9NSY1 1161 aaPredicted RBP9.98□□□□□ -0.81
CASC19-268ENST00000641953 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
CASC19-268ENST00000641953 MRC2Q9UBG0 1479 aa9.95□□□□□ -0.82
CASC19-268ENST00000641953 COLQQ9Y215 455 aaPredicted RBP9.94□□□□□ -0.82
CASC19-268ENST00000641953 DNMBPQ6XZF7 1577 aa9.93□□□□□ -0.82
CASC19-268ENST00000641953 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
CASC19-268ENST00000641953 TIE1P35590 1138 aa9.92□□□□□ -0.82
CASC19-268ENST00000641953 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
CASC19-268ENST00000641953 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
CASC19-268ENST00000641953 URB2Q14146 1524 aaKnown RBP9.92□□□□□ -0.82
CASC19-268ENST00000641953 KIF12Q96FN5 646 aa9.91□□□□□ -0.82
CASC19-268ENST00000641953 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
CASC19-268ENST00000641953 CCDC61Q9Y6R9 512 aa9.9□□□□□ -0.82
CASC19-268ENST00000641953 TOP2BQ02880 1626 aa9.89□□□□□ -0.83
CASC19-268ENST00000641953 CUX1P39880 1505 aa9.89□□□□□ -0.83
CASC19-268ENST00000641953 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
CASC19-268ENST00000641953 TOPBP1Q92547 1522 aa9.88□□□□□ -0.83
CASC19-268ENST00000641953 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
CASC19-268ENST00000641953 CUX2O14529 1486 aa9.87□□□□□ -0.83
CASC19-268ENST00000641953 TRPC6Q9Y210 931 aa9.87□□□□□ -0.83
CASC19-268ENST00000641953 WDR97A6NE52 1622 aa9.85□□□□□ -0.83
CASC19-268ENST00000641953 WRNQ14191 1432 aaPredicted RBP eCLIP9.85□□□□□ -0.83
CASC19-268ENST00000641953 IER5LQ5T953 404 aa9.85□□□□□ -0.83
CASC19-268ENST00000641953 TTLL13PA6NNM8 815 aa9.83□□□□□ -0.84
CASC19-268ENST00000641953 POLA1P09884 1462 aaPredicted RBP9.83□□□□□ -0.84
CASC19-268ENST00000641953 TARBP1Q13395 1621 aaKnown RBP9.82□□□□□ -0.84
CASC19-268ENST00000641953 FGD5Q6ZNL6 1462 aa9.8□□□□□ -0.84
CASC19-268ENST00000641953 MAP3K13O43283 966 aa9.8□□□□□ -0.84
CASC19-268ENST00000641953 SNPHO15079 494 aa9.79□□□□□ -0.84
CASC19-268ENST00000641953 MARVELD3Q96A59 401 aa9.77□□□□□ -0.85
CASC19-268ENST00000641953 TRIM35Q9UPQ4 493 aa9.77□□□□□ -0.85
CASC19-268ENST00000641953 ABCA5Q8WWZ7 1642 aa9.77□□□□□ -0.85
CASC19-268ENST00000641953 IFT140Q96RY7 1462 aa9.77□□□□□ -0.85
CASC19-268ENST00000641953 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.85
CASC19-268ENST00000641953 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
CASC19-268ENST00000641953 EIF4G3O43432 1585 aaKnown RBP9.75□□□□□ -0.85
CASC19-268ENST00000641953 PLCG2P16885 1265 aa9.7□□□□□ -0.86
CASC19-268ENST00000641953 RAD54L2Q9Y4B4 1467 aa9.69□□□□□ -0.86
CASC19-268ENST00000641953 PBRM1Q86U86 1689 aa9.68□□□□□ -0.86
CASC19-268ENST00000641953 ZNF608Q9ULD9 1512 aaPredicted RBP9.68□□□□□ -0.86
CASC19-268ENST00000641953 EMP3P54852 163 aa9.67□□□□□ -0.86
CASC19-268ENST00000641953 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
CASC19-268ENST00000641953 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
CASC19-268ENST00000641953 SOGA1O94964 1423 aa9.66□□□□□ -0.86
CASC19-268ENST00000641953 ERICH3Q5RHP9 1530 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms