RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 GRIN2AQ12879 1464 aa28.1■■■□□ 2.09
PHGDH-214ENST00000641314 CLIP1P30622 1438 aa28.07■■■□□ 2.08
PHGDH-214ENST00000641314 CHD1O14646 1710 aa27.98■■■□□ 2.07
PHGDH-214ENST00000641314 CEP170Q5SW79 1584 aa27.94■■■□□ 2.06
PHGDH-214ENST00000641314 IQGAP2Q13576 1575 aa27.92■■■□□ 2.06
PHGDH-214ENST00000641314 NUP160Q12769 1436 aa27.9■■■□□ 2.06
PHGDH-214ENST00000641314 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.06
PHGDH-214ENST00000641314 KIAA0586Q9BVV6 1533 aa27.89■■■□□ 2.06
PHGDH-214ENST00000641314 ARAP1Q96P48 1450 aa27.84■■■□□ 2.05
PHGDH-214ENST00000641314 EFCAB5A4FU69 1503 aa27.82■■■□□ 2.04
PHGDH-214ENST00000641314 P3H3Q8IVL6 736 aa27.8■■■□□ 2.04
PHGDH-214ENST00000641314 SAMD9Q5K651 1589 aa27.78■■■□□ 2.04
PHGDH-214ENST00000641314 VPS8Q8N3P4 1428 aa27.76■■■□□ 2.03
PHGDH-214ENST00000641314 UGGT2Q9NYU1 1516 aa27.76■■■□□ 2.03
PHGDH-214ENST00000641314 FHOD3Q2V2M9 1422 aa27.74■■■□□ 2.03
PHGDH-214ENST00000641314 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
PHGDH-214ENST00000641314 KIAA0556O60303 1618 aa27.65■■■□□ 2.02
PHGDH-214ENST00000641314 DISP1Q96F81 1524 aa27.64■■■□□ 2.02
PHGDH-214ENST00000641314 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
PHGDH-214ENST00000641314 CARMIL2Q6F5E8 1435 aa27.58■■■□□ 2.01
PHGDH-214ENST00000641314 FMN1Q68DA7 1419 aa27.57■■■□□ 2
PHGDH-214ENST00000641314 SHROOM2Q13796 1616 aa27.57■■■□□ 2
PHGDH-214ENST00000641314 PRG4Q92954 1404 aaPredicted RBP27.55■■■□□ 2
PHGDH-214ENST00000641314 PCF11O94913 1555 aaKnown RBP27.54■■■□□ 2
PHGDH-214ENST00000641314 OSCARQ8IYS5 282 aa27.52■■■□□ 2
PHGDH-214ENST00000641314 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
PHGDH-214ENST00000641314 PPARGC1BQ86YN6 1023 aaKnown RBP27.52■■■□□ 2
PHGDH-214ENST00000641314 APLP2Q06481 763 aa27.51■■□□□ 1.99
PHGDH-214ENST00000641314 ATP1B4Q9UN42 357 aaPredicted RBP27.48■■□□□ 1.99
PHGDH-214ENST00000641314 CASKIN1Q8WXD9 1431 aa27.47■■□□□ 1.99
PHGDH-214ENST00000641314 FYCO1Q9BQS8 1478 aa27.47■■□□□ 1.99
PHGDH-214ENST00000641314 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
PHGDH-214ENST00000641314 HECW1Q76N89 1606 aa27.36■■□□□ 1.97
PHGDH-214ENST00000641314 RAPGEF6Q8TEU7 1601 aa27.34■■□□□ 1.97
PHGDH-214ENST00000641314 TIAM1Q13009 1591 aa27.34■■□□□ 1.97
PHGDH-214ENST00000641314 PTPRGP23470 1445 aa27.34■■□□□ 1.97
PHGDH-214ENST00000641314 CFAP43Q8NDM7 1665 aa27.32■■□□□ 1.96
PHGDH-214ENST00000641314 LRRIQ1Q96JM4 1722 aa27.31■■□□□ 1.96
PHGDH-214ENST00000641314 PLB1Q6P1J6 1458 aa27.31■■□□□ 1.96
PHGDH-214ENST00000641314 MAP3K1Q13233 1512 aa27.31■■□□□ 1.96
PHGDH-214ENST00000641314 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
PHGDH-214ENST00000641314 ABCA8O94911 1581 aa27.26■■□□□ 1.95
PHGDH-214ENST00000641314 ARID3CA6NKF2 412 aa27.25■■□□□ 1.95
PHGDH-214ENST00000641314 CCDC18Q5T9S5 1454 aa27.25■■□□□ 1.95
PHGDH-214ENST00000641314 NUP153P49790 1475 aaKnown RBP27.24■■□□□ 1.95
PHGDH-214ENST00000641314 EPRSP07814 1512 aaKnown RBP27.24■■□□□ 1.95
PHGDH-214ENST00000641314 CDK13Q14004 1512 aaKnown RBP27.21■■□□□ 1.95
PHGDH-214ENST00000641314 LRRC9Q6ZRR7 1453 aa27.2■■□□□ 1.94
PHGDH-214ENST00000641314 UACAQ9BZF9 1416 aa27.17■■□□□ 1.94
PHGDH-214ENST00000641314 TRIM26Q12899 539 aaPredicted RBP27.14■■□□□ 1.94
PHGDH-214ENST00000641314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.14■■□□□ 1.93
PHGDH-214ENST00000641314 HNRNPUL2Q1KMD3 747 aaKnown RBP27.14■■□□□ 1.93
PHGDH-214ENST00000641314 MTUS2Q5JR59 1369 aa27.13■■□□□ 1.93
PHGDH-214ENST00000641314 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
PHGDH-214ENST00000641314 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
PHGDH-214ENST00000641314 MAGI3Q5TCQ9 1506 aa27.08■■□□□ 1.93
PHGDH-214ENST00000641314 EHBP1L1Q8N3D4 1523 aa27.08■■□□□ 1.93
PHGDH-214ENST00000641314 PCGF6Q9BYE7 350 aa27.06■■□□□ 1.92
PHGDH-214ENST00000641314 ATP10BO94823 1461 aa27.06■■□□□ 1.92
PHGDH-214ENST00000641314 UHRF1BP1LA0JNW5 1464 aa27.04■■□□□ 1.92
PHGDH-214ENST00000641314 CDK11AQ9UQ88 783 aaPredicted RBP27.02■■□□□ 1.92
PHGDH-214ENST00000641314 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
PHGDH-214ENST00000641314 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
PHGDH-214ENST00000641314 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
PHGDH-214ENST00000641314 SUPT6HQ7KZ85 1726 aaKnown RBP27■■□□□ 1.91
PHGDH-214ENST00000641314 ADCY10Q96PN6 1610 aa26.99■■□□□ 1.91
PHGDH-214ENST00000641314 NCOA2Q15596 1464 aa26.95■■□□□ 1.9
PHGDH-214ENST00000641314 TROQ12816 1431 aaPredicted RBP26.94■■□□□ 1.9
PHGDH-214ENST00000641314 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
PHGDH-214ENST00000641314 PHLDB1Q86UU1 1377 aa26.94■■□□□ 1.9
PHGDH-214ENST00000641314 PLEKHD1A6NEE1 506 aa26.92■■□□□ 1.9
PHGDH-214ENST00000641314 KDM5BQ9UGL1 1544 aa26.92■■□□□ 1.9
PHGDH-214ENST00000641314 KIF14Q15058 1648 aa26.85■■□□□ 1.89
PHGDH-214ENST00000641314 RRBP1Q9P2E9 1410 aaKnown RBP26.85■■□□□ 1.89
PHGDH-214ENST00000641314 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
PHGDH-214ENST00000641314 MYOM3Q5VTT5 1437 aa26.81■■□□□ 1.88
PHGDH-214ENST00000641314 CCNB3Q8WWL7 1395 aa26.81■■□□□ 1.88
PHGDH-214ENST00000641314 NPM1P06748 294 aaKnown RBP eCLIP26.79■■□□□ 1.88
PHGDH-214ENST00000641314 FGD6Q6ZV73 1430 aa26.77■■□□□ 1.88
PHGDH-214ENST00000641314 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
PHGDH-214ENST00000641314 FAM50AQ14320 339 aaKnown RBP26.73■■□□□ 1.87
PHGDH-214ENST00000641314 KCNH8Q96L42 1107 aa26.73■■□□□ 1.87
PHGDH-214ENST00000641314 ABCC10Q5T3U5 1492 aa26.72■■□□□ 1.87
PHGDH-214ENST00000641314 WDR7Q9Y4E6 1490 aa26.71■■□□□ 1.87
PHGDH-214ENST00000641314 ITSN2Q9NZM3 1697 aa26.7■■□□□ 1.86
PHGDH-214ENST00000641314 ASXL2Q76L83 1435 aa26.7■■□□□ 1.86
PHGDH-214ENST00000641314 PTPN23Q9H3S7 1636 aa26.68■■□□□ 1.86
PHGDH-214ENST00000641314 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
PHGDH-214ENST00000641314 MIA2Q96PC5 1412 aa26.66■■□□□ 1.86
PHGDH-214ENST00000641314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.66■■□□□ 1.86
PHGDH-214ENST00000641314 TTC37Q6PGP7 1564 aa26.66■■□□□ 1.86
PHGDH-214ENST00000641314 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
PHGDH-214ENST00000641314 ITGAEP38570 1179 aa26.65■■□□□ 1.86
PHGDH-214ENST00000641314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.62■■□□□ 1.85
PHGDH-214ENST00000641314 CFDP1Q9UEE9 299 aaPredicted RBP26.62■■□□□ 1.85
PHGDH-214ENST00000641314 TCOF1Q13428 1488 aaKnown RBP26.61■■□□□ 1.85
PHGDH-214ENST00000641314 PREX2Q70Z35 1606 aa26.58■■□□□ 1.85
PHGDH-214ENST00000641314 MYO5CQ9NQX4 1742 aa26.58■■□□□ 1.85
PHGDH-214ENST00000641314 ZNF777Q9ULD5 760 aaPredicted RBP26.57■■□□□ 1.84
PHGDH-214ENST00000641314 MAPKBP1O60336 1514 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms