RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
MACF1-234ENST00000641012 TONSLQ96HA7 1378 aa15.35■□□□□ 0.05
MACF1-234ENST00000641012 KDM2AQ9Y2K7 1162 aa15.34■□□□□ 0.05
MACF1-234ENST00000641012 CARMIL2Q6F5E8 1435 aa15.33■□□□□ 0.04
MACF1-234ENST00000641012 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
MACF1-234ENST00000641012 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
MACF1-234ENST00000641012 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
MACF1-234ENST00000641012 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.04
MACF1-234ENST00000641012 ANP32CO43423 234 aa15.26■□□□□ 0.03
MACF1-234ENST00000641012 CCNB3Q8WWL7 1395 aa15.26■□□□□ 0.03
MACF1-234ENST00000641012 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
MACF1-234ENST00000641012 MLECQ14165 292 aa15.24■□□□□ 0.03
MACF1-234ENST00000641012 PPP1R15AO75807 674 aaPredicted RBP15.23■□□□□ 0.03
MACF1-234ENST00000641012 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
MACF1-234ENST00000641012 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
MACF1-234ENST00000641012 NESP48681 1621 aa15.22■□□□□ 0.03
MACF1-234ENST00000641012 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
MACF1-234ENST00000641012 RAD54L2Q9Y4B4 1467 aa15.19■□□□□ 0.02
MACF1-234ENST00000641012 RAPGEF2Q9Y4G8 1499 aa15.19■□□□□ 0.02
MACF1-234ENST00000641012 FGD5Q6ZNL6 1462 aa15.17■□□□□ 0.02
MACF1-234ENST00000641012 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
MACF1-234ENST00000641012 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
MACF1-234ENST00000641012 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.01
MACF1-234ENST00000641012 NEFMP07197 916 aa15.14■□□□□ 0.01
MACF1-234ENST00000641012 EFCAB2Q5VUJ9 269 aa15.14■□□□□ 0.01
MACF1-234ENST00000641012 GGT6Q6P531 493 aa15.14■□□□□ 0.01
MACF1-234ENST00000641012 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
MACF1-234ENST00000641012 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
MACF1-234ENST00000641012 C14orf37Q86TY3 774 aa15.13■□□□□ 0.01
MACF1-234ENST00000641012 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
MACF1-234ENST00000641012 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
MACF1-234ENST00000641012 VPS8Q8N3P4 1428 aa15.1■□□□□ 0.01
MACF1-234ENST00000641012 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
MACF1-234ENST00000641012 PLEKHG5O94827 1062 aa15.1■□□□□ 0.01
MACF1-234ENST00000641012 IGF1RP08069 1367 aa15.09■□□□□ 0.01
MACF1-234ENST00000641012 CFTRP13569 1480 aa15.09■□□□□ 0.01
MACF1-234ENST00000641012 PTPRGP23470 1445 aa15.09■□□□□ 0.01
MACF1-234ENST00000641012 DDX10Q13206 875 aaKnown RBP15.08■□□□□ 0
MACF1-234ENST00000641012 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
MACF1-234ENST00000641012 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
MACF1-234ENST00000641012 HNRNPMP52272 730 aaKnown RBP eCLIP15.02□□□□□ -0.01
MACF1-234ENST00000641012 ACIN1Q9UKV3 1341 aaKnown RBP15.01□□□□□ -0.01
MACF1-234ENST00000641012 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
MACF1-234ENST00000641012 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
MACF1-234ENST00000641012 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
MACF1-234ENST00000641012 TMC1Q8TDI8 760 aa14.99□□□□□ -0.01
MACF1-234ENST00000641012 ARHGAP35Q9NRY4 1499 aa14.99□□□□□ -0.01
MACF1-234ENST00000641012 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
MACF1-234ENST00000641012 KANK1Q14678 1352 aa14.97□□□□□ -0.01
MACF1-234ENST00000641012 KIF3BO15066 747 aa14.97□□□□□ -0.01
MACF1-234ENST00000641012 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
MACF1-234ENST00000641012 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
MACF1-234ENST00000641012 BCL11AQ9H165 835 aa14.94□□□□□ -0.02
MACF1-234ENST00000641012 ZBTB7CA1YPR0 619 aa14.94□□□□□ -0.02
MACF1-234ENST00000641012 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
MACF1-234ENST00000641012 CARD11Q9BXL7 1154 aa14.93□□□□□ -0.02
MACF1-234ENST00000641012 SALL2Q9Y467 1007 aaPredicted RBP14.93□□□□□ -0.02
MACF1-234ENST00000641012 FAM69CQ0P6D2 419 aa14.92□□□□□ -0.02
MACF1-234ENST00000641012 PKD2Q13563 968 aa14.92□□□□□ -0.02
MACF1-234ENST00000641012 POGKQ9P215 609 aa14.92□□□□□ -0.02
MACF1-234ENST00000641012 FOXD1Q16676 465 aa14.92□□□□□ -0.02
MACF1-234ENST00000641012 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
MACF1-234ENST00000641012 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
MACF1-234ENST00000641012 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
MACF1-234ENST00000641012 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
MACF1-234ENST00000641012 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
MACF1-234ENST00000641012 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
MACF1-234ENST00000641012 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
MACF1-234ENST00000641012 A0A0G2JS52 829 aa14.88□□□□□ -0.03
MACF1-234ENST00000641012 NUP155O75694 1391 aa14.88□□□□□ -0.03
MACF1-234ENST00000641012 HAP1P54257 671 aaPredicted RBP14.88□□□□□ -0.03
MACF1-234ENST00000641012 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
MACF1-234ENST00000641012 ANKRD30AQ9BXX3 1397 aa14.87□□□□□ -0.03
MACF1-234ENST00000641012 HDGFP51858 240 aaKnown RBP14.87□□□□□ -0.03
MACF1-234ENST00000641012 RSPH4AQ5TD94 716 aa14.87□□□□□ -0.03
MACF1-234ENST00000641012 WASHC2CQ9Y4E1 1318 aa14.85□□□□□ -0.03
MACF1-234ENST00000641012 DAXXQ9UER7 740 aaPredicted RBP14.85□□□□□ -0.03
MACF1-234ENST00000641012 SAFB2Q14151 953 aaKnown RBP eCLIP14.84□□□□□ -0.038e-7■■■□□ 17.9
MACF1-234ENST00000641012 ZBTB47Q9UFB7 747 aaPredicted RBP14.83□□□□□ -0.04
MACF1-234ENST00000641012 SETD5Q9C0A6 1442 aa14.82□□□□□ -0.04
MACF1-234ENST00000641012 HNRNPUQ00839 825 aaKnown RBP eCLIP14.82□□□□□ -0.04
MACF1-234ENST00000641012 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
MACF1-234ENST00000641012 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
MACF1-234ENST00000641012 PRG4Q92954 1404 aaPredicted RBP14.81□□□□□ -0.04
MACF1-234ENST00000641012 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
MACF1-234ENST00000641012 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
MACF1-234ENST00000641012 CDCA8Q53HL2 280 aa14.81□□□□□ -0.04
MACF1-234ENST00000641012 MPHOSPH9Q99550 1183 aa14.81□□□□□ -0.04
MACF1-234ENST00000641012 STK26Q9P289 416 aa14.81□□□□□ -0.04
MACF1-234ENST00000641012 CUX1P39880 1505 aa14.8□□□□□ -0.04
MACF1-234ENST00000641012 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.04
MACF1-234ENST00000641012 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.05
MACF1-234ENST00000641012 KNSTRNQ9Y448 316 aa14.77□□□□□ -0.05
MACF1-234ENST00000641012 NUTM2DQ5VT03 806 aaPredicted RBP14.76□□□□□ -0.05
MACF1-234ENST00000641012 RAB3GAP2Q9H2M9 1393 aa14.76□□□□□ -0.05
MACF1-234ENST00000641012 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
MACF1-234ENST00000641012 ZNF644Q9H582 1327 aaPredicted RBP14.74□□□□□ -0.05
MACF1-234ENST00000641012 SRPK2P78362 688 aaKnown RBP14.73□□□□□ -0.05
MACF1-234ENST00000641012 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
MACF1-234ENST00000641012 TNNT2P45379 298 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms