RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 CLIP1P30622 1438 aa14.36□□□□□ -0.11
PAX6-273ENST00000640610 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.11
PAX6-273ENST00000640610 FOXD1Q16676 465 aa14.35□□□□□ -0.11
PAX6-273ENST00000640610 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
PAX6-273ENST00000640610 IGF1RP08069 1367 aa14.35□□□□□ -0.11
PAX6-273ENST00000640610 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
PAX6-273ENST00000640610 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
PAX6-273ENST00000640610 EIF4G3O43432 1585 aaKnown RBP14.32□□□□□ -0.12
PAX6-273ENST00000640610 PRXQ9BXM0 1461 aa14.3□□□□□ -0.12
PAX6-273ENST00000640610 ERICH3Q5RHP9 1530 aa14.29□□□□□ -0.12
PAX6-273ENST00000640610 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.13
PAX6-273ENST00000640610 CUL7Q14999 1698 aa14.26□□□□□ -0.13
PAX6-273ENST00000640610 VPS8Q8N3P4 1428 aa14.26□□□□□ -0.13
PAX6-273ENST00000640610 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
PAX6-273ENST00000640610 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
PAX6-273ENST00000640610 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
PAX6-273ENST00000640610 ADAMTS12P58397 1594 aa14.2□□□□□ -0.14
PAX6-273ENST00000640610 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
PAX6-273ENST00000640610 APLP2Q06481 763 aa14.17□□□□□ -0.14
PAX6-273ENST00000640610 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
PAX6-273ENST00000640610 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
PAX6-273ENST00000640610 KANK4Q5T7N3 995 aaPredicted RBP14.12□□□□□ -0.15
PAX6-273ENST00000640610 SYNJ2O15056 1496 aa14.11□□□□□ -0.15
PAX6-273ENST00000640610 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
PAX6-273ENST00000640610 CTTNBP2Q8WZ74 1663 aa14.1□□□□□ -0.15
PAX6-273ENST00000640610 GRIN2AQ12879 1464 aa14.1□□□□□ -0.15
PAX6-273ENST00000640610 FBLN2P98095 1184 aa14.09□□□□□ -0.15
PAX6-273ENST00000640610 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
PAX6-273ENST00000640610 CHD1O14646 1710 aa14.08□□□□□ -0.16
PAX6-273ENST00000640610 ARHGAP35Q9NRY4 1499 aa14.05□□□□□ -0.16
PAX6-273ENST00000640610 CEP170Q5SW79 1584 aa14.03□□□□□ -0.16
PAX6-273ENST00000640610 IQGAP2Q13576 1575 aa14□□□□□ -0.17
PAX6-273ENST00000640610 NUP160Q12769 1436 aa14□□□□□ -0.17
PAX6-273ENST00000640610 YTHDC1Q96MU7 727 aaKnown RBP13.99□□□□□ -0.17
PAX6-273ENST00000640610 KIAA0586Q9BVV6 1533 aa13.98□□□□□ -0.17
PAX6-273ENST00000640610 CLSPNQ9HAW4 1339 aa13.95□□□□□ -0.18
PAX6-273ENST00000640610 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
PAX6-273ENST00000640610 ITGAEP38570 1179 aa13.92□□□□□ -0.18
PAX6-273ENST00000640610 MIER1Q8N108 512 aa13.92□□□□□ -0.18
PAX6-273ENST00000640610 SAMD9Q5K651 1589 aa13.92□□□□□ -0.18
PAX6-273ENST00000640610 EFCAB5A4FU69 1503 aa13.91□□□□□ -0.18
PAX6-273ENST00000640610 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
PAX6-273ENST00000640610 RRBP1Q9P2E9 1410 aaKnown RBP13.91□□□□□ -0.18
PAX6-273ENST00000640610 DHX57Q6P158 1386 aaKnown RBP13.91□□□□□ -0.18
PAX6-273ENST00000640610 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
PAX6-273ENST00000640610 FHOD3Q2V2M9 1422 aa13.89□□□□□ -0.19
PAX6-273ENST00000640610 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
PAX6-273ENST00000640610 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
PAX6-273ENST00000640610 CLASP1Q7Z460 1538 aa13.88□□□□□ -0.19
PAX6-273ENST00000640610 DISP1Q96F81 1524 aa13.88□□□□□ -0.19
PAX6-273ENST00000640610 KIAA0556O60303 1618 aa13.86□□□□□ -0.19
PAX6-273ENST00000640610 SHROOM2Q13796 1616 aa13.85□□□□□ -0.19
PAX6-273ENST00000640610 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
PAX6-273ENST00000640610 TIAM1Q13009 1591 aa13.84□□□□□ -0.19
PAX6-273ENST00000640610 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
PAX6-273ENST00000640610 PRG4Q92954 1404 aaPredicted RBP13.82□□□□□ -0.2
PAX6-273ENST00000640610 PCF11O94913 1555 aaKnown RBP13.81□□□□□ -0.2
PAX6-273ENST00000640610 PHLDB1Q86UU1 1377 aa13.81□□□□□ -0.2
PAX6-273ENST00000640610 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
PAX6-273ENST00000640610 CARMIL2Q6F5E8 1435 aa13.8□□□□□ -0.2
PAX6-273ENST00000640610 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
PAX6-273ENST00000640610 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
PAX6-273ENST00000640610 MSH5O43196 834 aa13.77□□□□□ -0.21
PAX6-273ENST00000640610 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
PAX6-273ENST00000640610 MAP3K1Q13233 1512 aa13.76□□□□□ -0.21
PAX6-273ENST00000640610 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
PAX6-273ENST00000640610 SUPT16HQ9Y5B9 1047 aaKnown RBP13.76□□□□□ -0.21
PAX6-273ENST00000640610 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
PAX6-273ENST00000640610 LRRIQ1Q96JM4 1722 aa13.74□□□□□ -0.21
PAX6-273ENST00000640610 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
PAX6-273ENST00000640610 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
PAX6-273ENST00000640610 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
PAX6-273ENST00000640610 RAPGEF6Q8TEU7 1601 aa13.7□□□□□ -0.22
PAX6-273ENST00000640610 PLB1Q6P1J6 1458 aa13.7□□□□□ -0.22
PAX6-273ENST00000640610 PTPRGP23470 1445 aa13.7□□□□□ -0.22
PAX6-273ENST00000640610 MAPKBP1O60336 1514 aa13.7□□□□□ -0.22
PAX6-273ENST00000640610 HECW1Q76N89 1606 aa13.68□□□□□ -0.22
PAX6-273ENST00000640610 SETD5Q9C0A6 1442 aa13.68□□□□□ -0.22
PAX6-273ENST00000640610 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
PAX6-273ENST00000640610 ABCA8O94911 1581 aa13.67□□□□□ -0.22
PAX6-273ENST00000640610 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
PAX6-273ENST00000640610 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
PAX6-273ENST00000640610 SIN3AQ96ST3 1273 aa13.65□□□□□ -0.22
PAX6-273ENST00000640610 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
PAX6-273ENST00000640610 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
PAX6-273ENST00000640610 BCL11AQ9H165 835 aa13.62□□□□□ -0.23
PAX6-273ENST00000640610 UACAQ9BZF9 1416 aa13.62□□□□□ -0.23
PAX6-273ENST00000640610 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
PAX6-273ENST00000640610 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
PAX6-273ENST00000640610 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
PAX6-273ENST00000640610 ABCC2Q92887 1545 aa13.59□□□□□ -0.23
PAX6-273ENST00000640610 MAGI3Q5TCQ9 1506 aa13.59□□□□□ -0.23
PAX6-273ENST00000640610 RIMBP3CA6NJZ7 1639 aa13.58□□□□□ -0.23
PAX6-273ENST00000640610 RIMBP3BA6NNM3 1639 aa13.58□□□□□ -0.23
PAX6-273ENST00000640610 RIMBP3Q9UFD9 1639 aa13.58□□□□□ -0.23
PAX6-273ENST00000640610 FGD6Q6ZV73 1430 aa13.58□□□□□ -0.24
PAX6-273ENST00000640610 ATP10BO94823 1461 aa13.58□□□□□ -0.24
PAX6-273ENST00000640610 PTPRKQ15262 1439 aa13.57□□□□□ -0.24
PAX6-273ENST00000640610 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
PAX6-273ENST00000640610 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 338.4 ms