RNA–Protein interactions for RNA: ENST00000640298.1

RHOXF1P3-203, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 2,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-203ENST00000640298 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
RHOXF1P3-203ENST00000640298 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
RHOXF1P3-203ENST00000640298 TIAM1Q13009 1591 aa22.51■■□□□ 1.19
RHOXF1P3-203ENST00000640298 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
RHOXF1P3-203ENST00000640298 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
RHOXF1P3-203ENST00000640298 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
RHOXF1P3-203ENST00000640298 RAB3GAP2Q9H2M9 1393 aa22.46■■□□□ 1.19
RHOXF1P3-203ENST00000640298 LRRC9Q6ZRR7 1453 aa22.44■■□□□ 1.18
RHOXF1P3-203ENST00000640298 ITGAEP38570 1179 aa22.43■■□□□ 1.18
RHOXF1P3-203ENST00000640298 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
RHOXF1P3-203ENST00000640298 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
RHOXF1P3-203ENST00000640298 MAPKBP1O60336 1514 aa22.4■■□□□ 1.18
RHOXF1P3-203ENST00000640298 SETD5Q9C0A6 1442 aa22.39■■□□□ 1.17
RHOXF1P3-203ENST00000640298 PHLDB1Q86UU1 1377 aa22.37■■□□□ 1.17
RHOXF1P3-203ENST00000640298 TDRD9Q8NDG6 1382 aaKnown RBP22.31■■□□□ 1.16
RHOXF1P3-203ENST00000640298 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
RHOXF1P3-203ENST00000640298 WDR97A6NE52 1622 aa22.3■■□□□ 1.16
RHOXF1P3-203ENST00000640298 PCF11O94913 1555 aaKnown RBP22.28■■□□□ 1.16
RHOXF1P3-203ENST00000640298 FYCO1Q9BQS8 1478 aa22.25■■□□□ 1.15
RHOXF1P3-203ENST00000640298 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
RHOXF1P3-203ENST00000640298 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
RHOXF1P3-203ENST00000640298 CUL7Q14999 1698 aa22.24■■□□□ 1.15
RHOXF1P3-203ENST00000640298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.24■■□□□ 1.15
RHOXF1P3-203ENST00000640298 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.15
RHOXF1P3-203ENST00000640298 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
RHOXF1P3-203ENST00000640298 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
RHOXF1P3-203ENST00000640298 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
RHOXF1P3-203ENST00000640298 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
RHOXF1P3-203ENST00000640298 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
RHOXF1P3-203ENST00000640298 FHOD3Q2V2M9 1422 aa22.22■■□□□ 1.15
RHOXF1P3-203ENST00000640298 MYT1Q01538 1121 aa22.21■■□□□ 1.15
RHOXF1P3-203ENST00000640298 SUPT16HQ9Y5B9 1047 aaKnown RBP22.19■■□□□ 1.14
RHOXF1P3-203ENST00000640298 MRC2Q9UBG0 1479 aa22.19■■□□□ 1.14
RHOXF1P3-203ENST00000640298 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
RHOXF1P3-203ENST00000640298 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
RHOXF1P3-203ENST00000640298 ATP1B4Q9UN42 357 aaPredicted RBP22.16■■□□□ 1.14
RHOXF1P3-203ENST00000640298 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
RHOXF1P3-203ENST00000640298 CTTNBP2Q8WZ74 1663 aa22.09■■□□□ 1.13
RHOXF1P3-203ENST00000640298 FGD6Q6ZV73 1430 aa22.08■■□□□ 1.12
RHOXF1P3-203ENST00000640298 KCNH8Q96L42 1107 aa22.07■■□□□ 1.12
RHOXF1P3-203ENST00000640298 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
RHOXF1P3-203ENST00000640298 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
RHOXF1P3-203ENST00000640298 DDX10Q13206 875 aaKnown RBP22.04■■□□□ 1.12
RHOXF1P3-203ENST00000640298 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
RHOXF1P3-203ENST00000640298 WDR62O43379 1518 aa22.02■■□□□ 1.12
RHOXF1P3-203ENST00000640298 PBRM1Q86U86 1689 aa22■■□□□ 1.11
RHOXF1P3-203ENST00000640298 MTUS2Q5JR59 1369 aa22■■□□□ 1.11
RHOXF1P3-203ENST00000640298 HFM1A2PYH4 1435 aa22■■□□□ 1.11
RHOXF1P3-203ENST00000640298 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
RHOXF1P3-203ENST00000640298 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
RHOXF1P3-203ENST00000640298 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
RHOXF1P3-203ENST00000640298 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
RHOXF1P3-203ENST00000640298 CCDC18Q5T9S5 1454 aa21.96■■□□□ 1.11
RHOXF1P3-203ENST00000640298 PTPRKQ15262 1439 aa21.96■■□□□ 1.11
RHOXF1P3-203ENST00000640298 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
RHOXF1P3-203ENST00000640298 THOC2Q8NI27 1593 aaKnown RBP21.93■■□□□ 1.1
RHOXF1P3-203ENST00000640298 CCER2I3L3R5 266 aa21.93■■□□□ 1.1
RHOXF1P3-203ENST00000640298 MYOM3Q5VTT5 1437 aa21.92■■□□□ 1.1
RHOXF1P3-203ENST00000640298 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
RHOXF1P3-203ENST00000640298 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
RHOXF1P3-203ENST00000640298 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
RHOXF1P3-203ENST00000640298 PTPN23Q9H3S7 1636 aa21.91■■□□□ 1.1
RHOXF1P3-203ENST00000640298 NAIPQ13075 1403 aa21.9■■□□□ 1.1
RHOXF1P3-203ENST00000640298 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
RHOXF1P3-203ENST00000640298 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
RHOXF1P3-203ENST00000640298 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
RHOXF1P3-203ENST00000640298 ANP32CO43423 234 aa21.86■■□□□ 1.09
RHOXF1P3-203ENST00000640298 SUPT6HQ7KZ85 1726 aaKnown RBP21.84■■□□□ 1.09
RHOXF1P3-203ENST00000640298 TSHZ2Q9NRE2 1034 aa21.83■■□□□ 1.09
RHOXF1P3-203ENST00000640298 ARHGEF11O15085 1522 aa21.83■■□□□ 1.09
RHOXF1P3-203ENST00000640298 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
RHOXF1P3-203ENST00000640298 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
RHOXF1P3-203ENST00000640298 IQGAP2Q13576 1575 aa21.8■■□□□ 1.08
RHOXF1P3-203ENST00000640298 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
RHOXF1P3-203ENST00000640298 TCOF1Q13428 1488 aaKnown RBP21.76■■□□□ 1.07
RHOXF1P3-203ENST00000640298 MAGI3Q5TCQ9 1506 aa21.76■■□□□ 1.07
RHOXF1P3-203ENST00000640298 FKBP8Q14318 412 aa21.75■■□□□ 1.07
RHOXF1P3-203ENST00000640298 AKNAQ7Z591 1439 aa21.73■■□□□ 1.07
RHOXF1P3-203ENST00000640298 GRIN2AQ12879 1464 aa21.7■■□□□ 1.07
RHOXF1P3-203ENST00000640298 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
RHOXF1P3-203ENST00000640298 HECW1Q76N89 1606 aa21.69■■□□□ 1.06
RHOXF1P3-203ENST00000640298 RRP7BPQ9NSQ0 103 aa21.68■■□□□ 1.06
RHOXF1P3-203ENST00000640298 DENND4BO75064 1496 aaPredicted RBP21.68■■□□□ 1.06
RHOXF1P3-203ENST00000640298 MIA2Q96PC5 1412 aa21.67■■□□□ 1.06
RHOXF1P3-203ENST00000640298 BCANQ96GW7 911 aa21.67■■□□□ 1.06
RHOXF1P3-203ENST00000640298 NEFLP07196 543 aa21.67■■□□□ 1.06
RHOXF1P3-203ENST00000640298 EPRSP07814 1512 aaKnown RBP21.67■■□□□ 1.06
RHOXF1P3-203ENST00000640298 KIAA0586Q9BVV6 1533 aa21.67■■□□□ 1.06
RHOXF1P3-203ENST00000640298 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
RHOXF1P3-203ENST00000640298 GCC2Q8IWJ2 1684 aa21.66■■□□□ 1.06
RHOXF1P3-203ENST00000640298 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
RHOXF1P3-203ENST00000640298 FBLN2P98095 1184 aa21.65■■□□□ 1.06
RHOXF1P3-203ENST00000640298 CHIC2Q9UKJ5 165 aa21.63■■□□□ 1.05
RHOXF1P3-203ENST00000640298 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
RHOXF1P3-203ENST00000640298 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
RHOXF1P3-203ENST00000640298 HSPA5P11021 654 aaKnown RBP21.59■■□□□ 1.05
RHOXF1P3-203ENST00000640298 DISP1Q96F81 1524 aa21.59■■□□□ 1.05
RHOXF1P3-203ENST00000640298 WASHC2AQ641Q2 1341 aa21.59■■□□□ 1.05
RHOXF1P3-203ENST00000640298 MPHOSPH9Q99550 1183 aa21.58■■□□□ 1.05
RHOXF1P3-203ENST00000640298 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms