RNA–Protein interactions for RNA: ENST00000639657.1

KCNMA1-267, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-267ENST00000639657 ZNF777Q9ULD5 760 aaPredicted RBP10.46□□□□□ -0.74
KCNMA1-267ENST00000639657 CUX2O14529 1486 aa10.44□□□□□ -0.74
KCNMA1-267ENST00000639657 KIF27Q86VH2 1401 aa10.44□□□□□ -0.74
KCNMA1-267ENST00000639657 VPS8Q8N3P4 1428 aa10.44□□□□□ -0.74
KCNMA1-267ENST00000639657 FAM9BQ8IZU0 186 aa10.43□□□□□ -0.74
KCNMA1-267ENST00000639657 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
KCNMA1-267ENST00000639657 RBM19Q9Y4C8 960 aaKnown RBP10.42□□□□□ -0.74
KCNMA1-267ENST00000639657 SYNJ1O43426 1573 aa10.41□□□□□ -0.74
KCNMA1-267ENST00000639657 CARMIL1Q5VZK9 1371 aa10.41□□□□□ -0.74
KCNMA1-267ENST00000639657 NPM2Q86SE8 214 aaKnown RBP10.41□□□□□ -0.74
KCNMA1-267ENST00000639657 FOXD1Q16676 465 aa10.39□□□□□ -0.75
KCNMA1-267ENST00000639657 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
KCNMA1-267ENST00000639657 GLIPR1L2Q4G1C9 344 aa10.38□□□□□ -0.75
KCNMA1-267ENST00000639657 DAXXQ9UER7 740 aaPredicted RBP10.38□□□□□ -0.75
KCNMA1-267ENST00000639657 TONSLQ96HA7 1378 aa10.37□□□□□ -0.75
KCNMA1-267ENST00000639657 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
KCNMA1-267ENST00000639657 MTUS2Q5JR59 1369 aa10.34□□□□□ -0.75
KCNMA1-267ENST00000639657 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
KCNMA1-267ENST00000639657 SALL2Q9Y467 1007 aaPredicted RBP10.33□□□□□ -0.76
KCNMA1-267ENST00000639657 IGF1RP08069 1367 aa10.33□□□□□ -0.76
KCNMA1-267ENST00000639657 ANP32AP39687 249 aaKnown RBP10.32□□□□□ -0.76
KCNMA1-267ENST00000639657 FHOD3Q2V2M9 1422 aa10.31□□□□□ -0.76
KCNMA1-267ENST00000639657 MYT1LQ9UL68 1186 aa10.31□□□□□ -0.76
KCNMA1-267ENST00000639657 RAB3GAP2Q9H2M9 1393 aa10.31□□□□□ -0.76
KCNMA1-267ENST00000639657 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
KCNMA1-267ENST00000639657 RAD54L2Q9Y4B4 1467 aa10.31□□□□□ -0.76
KCNMA1-267ENST00000639657 ARAP1Q96P48 1450 aa10.3□□□□□ -0.76
KCNMA1-267ENST00000639657 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
KCNMA1-267ENST00000639657 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
KCNMA1-267ENST00000639657 MRS2Q9HD23 443 aa10.3□□□□□ -0.76
KCNMA1-267ENST00000639657 KIF21BO75037 1637 aa10.29□□□□□ -0.76
KCNMA1-267ENST00000639657 NESP48681 1621 aa10.28□□□□□ -0.76
KCNMA1-267ENST00000639657 CCDC136Q96JN2 1154 aa10.28□□□□□ -0.76
KCNMA1-267ENST00000639657 UNC13AQ9UPW8 1703 aa10.28□□□□□ -0.76
KCNMA1-267ENST00000639657 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
KCNMA1-267ENST00000639657 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
KCNMA1-267ENST00000639657 SENP3Q9H4L4 574 aaPredicted RBP10.26□□□□□ -0.77
KCNMA1-267ENST00000639657 CHMP7Q8WUX9 453 aaPredicted RBP10.25□□□□□ -0.77
KCNMA1-267ENST00000639657 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
KCNMA1-267ENST00000639657 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
KCNMA1-267ENST00000639657 PHLDB1Q86UU1 1377 aa10.23□□□□□ -0.77
KCNMA1-267ENST00000639657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.23□□□□□ -0.77
KCNMA1-267ENST00000639657 CUX1P39880 1505 aa10.23□□□□□ -0.77
KCNMA1-267ENST00000639657 DEKP35659 375 aaKnown RBP10.22□□□□□ -0.77
KCNMA1-267ENST00000639657 NCAPD3P42695 1498 aa10.22□□□□□ -0.77
KCNMA1-267ENST00000639657 FGD5Q6ZNL6 1462 aa10.21□□□□□ -0.77
KCNMA1-267ENST00000639657 SLC4A1APQ9BWU0 796 aaKnown RBP10.21□□□□□ -0.78
KCNMA1-267ENST00000639657 ARHGAP35Q9NRY4 1499 aa10.19□□□□□ -0.78
KCNMA1-267ENST00000639657 FANCD2Q9BXW9 1451 aa10.19□□□□□ -0.78
KCNMA1-267ENST00000639657 ZNF644Q9H582 1327 aaPredicted RBP10.19□□□□□ -0.78
KCNMA1-267ENST00000639657 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
KCNMA1-267ENST00000639657 RGL3Q3MIN7 710 aa10.18□□□□□ -0.78
KCNMA1-267ENST00000639657 PPP4R2Q9NY27 417 aa10.18□□□□□ -0.78
KCNMA1-267ENST00000639657 PRXQ9BXM0 1461 aa10.18□□□□□ -0.78
KCNMA1-267ENST00000639657 EIF4G2P78344 907 aaKnown RBP eCLIP10.18□□□□□ -0.78
KCNMA1-267ENST00000639657 LAS1LQ9Y4W2 734 aaKnown RBP10.17□□□□□ -0.78
KCNMA1-267ENST00000639657 CFTRP13569 1480 aa10.17□□□□□ -0.78
KCNMA1-267ENST00000639657 PPP1R15AO75807 674 aaPredicted RBP10.17□□□□□ -0.78
KCNMA1-267ENST00000639657 NOP58Q9Y2X3 529 aaKnown RBP10.16□□□□□ -0.78
KCNMA1-267ENST00000639657 TMC1Q8TDI8 760 aa10.16□□□□□ -0.78
KCNMA1-267ENST00000639657 CCER2I3L3R5 266 aa10.14□□□□□ -0.79
KCNMA1-267ENST00000639657 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
KCNMA1-267ENST00000639657 ARXQ96QS3 562 aa10.13□□□□□ -0.79
KCNMA1-267ENST00000639657 AQRO60306 1485 aaKnown RBP eCLIP10.12□□□□□ -0.79
KCNMA1-267ENST00000639657 PDS5BQ9NTI5 1447 aa10.12□□□□□ -0.79
KCNMA1-267ENST00000639657 HSPA5P11021 654 aaKnown RBP10.12□□□□□ -0.79
KCNMA1-267ENST00000639657 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
KCNMA1-267ENST00000639657 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
KCNMA1-267ENST00000639657 FHAD1B1AJZ9 1412 aa10.11□□□□□ -0.79
KCNMA1-267ENST00000639657 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
KCNMA1-267ENST00000639657 NEFMP07197 916 aa10.08□□□□□ -0.8
KCNMA1-267ENST00000639657 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
KCNMA1-267ENST00000639657 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
KCNMA1-267ENST00000639657 TSPY4P0CV99 314 aa10.07□□□□□ -0.8
KCNMA1-267ENST00000639657 TSPY10P0CW01 314 aa10.07□□□□□ -0.8
KCNMA1-267ENST00000639657 MSH5O43196 834 aa10.06□□□□□ -0.8
KCNMA1-267ENST00000639657 LRRC9Q6ZRR7 1453 aa10.05□□□□□ -0.8
KCNMA1-267ENST00000639657 CC2D2AQ9P2K1 1620 aa10.05□□□□□ -0.8
KCNMA1-267ENST00000639657 HNRNPMP52272 730 aaKnown RBP eCLIP10.05□□□□□ -0.8
KCNMA1-267ENST00000639657 PKD2Q13563 968 aa10.04□□□□□ -0.8
KCNMA1-267ENST00000639657 POLA1P09884 1462 aaPredicted RBP10.04□□□□□ -0.8
KCNMA1-267ENST00000639657 CCDC184Q52MB2 194 aa10.04□□□□□ -0.8
KCNMA1-267ENST00000639657 PEG3Q9GZU2 1588 aa10.03□□□□□ -0.8
KCNMA1-267ENST00000639657 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
KCNMA1-267ENST00000639657 RRBP1Q9P2E9 1410 aaKnown RBP10.03□□□□□ -0.8
KCNMA1-267ENST00000639657 CHGAP10645 457 aaKnown RBP10.02□□□□□ -0.81
KCNMA1-267ENST00000639657 JPH4Q96JJ6 628 aa10.02□□□□□ -0.81
KCNMA1-267ENST00000639657 ERCC6Q03468 1493 aa10.01□□□□□ -0.81
KCNMA1-267ENST00000639657 GAPVD1Q14C86 1478 aa10.01□□□□□ -0.81
KCNMA1-267ENST00000639657 TIMELESSQ9UNS1 1208 aa10.01□□□□□ -0.81
KCNMA1-267ENST00000639657 CANXP27824 592 aaKnown RBP10.01□□□□□ -0.81
KCNMA1-267ENST00000639657 FMN1Q68DA7 1419 aa10□□□□□ -0.81
KCNMA1-267ENST00000639657 FANCIQ9NVI1 1328 aa10□□□□□ -0.81
KCNMA1-267ENST00000639657 CARD11Q9BXL7 1154 aa10□□□□□ -0.81
KCNMA1-267ENST00000639657 TOPBP1Q92547 1522 aa9.99□□□□□ -0.81
KCNMA1-267ENST00000639657 C11orf95C9JLR9 678 aaPredicted RBP9.99□□□□□ -0.81
KCNMA1-267ENST00000639657 PODXL2Q9NZ53 605 aa9.99□□□□□ -0.81
KCNMA1-267ENST00000639657 ERICH3Q5RHP9 1530 aa9.98□□□□□ -0.81
KCNMA1-267ENST00000639657 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
KCNMA1-267ENST00000639657 FGD6Q6ZV73 1430 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms