RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 RRBP1Q9P2E9 1410 aaKnown RBP28.23■■■□□ 2.11
CROCCP2-206ENST00000639594 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
CROCCP2-206ENST00000639594 GAPVD1Q14C86 1478 aa28.16■■■□□ 2.1
CROCCP2-206ENST00000639594 TIAM1Q13009 1591 aa28.15■■■□□ 2.1
CROCCP2-206ENST00000639594 MAP3K1Q13233 1512 aa28.12■■■□□ 2.09
CROCCP2-206ENST00000639594 CUL7Q14999 1698 aa28.12■■■□□ 2.09
CROCCP2-206ENST00000639594 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.092e-9■■■■■ 26.8
CROCCP2-206ENST00000639594 CCNB3Q8WWL7 1395 aa28.09■■■□□ 2.09
CROCCP2-206ENST00000639594 IFT140Q96RY7 1462 aa28.09■■■□□ 2.09
CROCCP2-206ENST00000639594 ZNF608Q9ULD9 1512 aaPredicted RBP28.07■■■□□ 2.08
CROCCP2-206ENST00000639594 DHX57Q6P158 1386 aaKnown RBP28.07■■■□□ 2.08
CROCCP2-206ENST00000639594 CTTNBP2Q8WZ74 1663 aa28.06■■■□□ 2.08
CROCCP2-206ENST00000639594 PBRM1Q86U86 1689 aa28.05■■■□□ 2.08
CROCCP2-206ENST00000639594 PCF11O94913 1555 aaKnown RBP28.03■■■□□ 2.08
CROCCP2-206ENST00000639594 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
CROCCP2-206ENST00000639594 P3H3Q8IVL6 736 aa28.02■■■□□ 2.08
CROCCP2-206ENST00000639594 CFAP43Q8NDM7 1665 aa28.02■■■□□ 2.08
CROCCP2-206ENST00000639594 CLSPNQ9HAW4 1339 aa28.01■■■□□ 2.07
CROCCP2-206ENST00000639594 LRRC9Q6ZRR7 1453 aa28.01■■■□□ 2.07
CROCCP2-206ENST00000639594 SCAF1Q9H7N4 1312 aaKnown RBP27.98■■■□□ 2.07
CROCCP2-206ENST00000639594 EFCAB5A4FU69 1503 aa27.96■■■□□ 2.07
CROCCP2-206ENST00000639594 FHOD3Q2V2M9 1422 aa27.96■■■□□ 2.07
CROCCP2-206ENST00000639594 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
CROCCP2-206ENST00000639594 ITGAEP38570 1179 aa27.93■■■□□ 2.06
CROCCP2-206ENST00000639594 GRIN2BQ13224 1484 aa27.91■■■□□ 2.06
CROCCP2-206ENST00000639594 PHLDB1Q86UU1 1377 aa27.89■■■□□ 2.05
CROCCP2-206ENST00000639594 ADAMTS12P58397 1594 aa27.87■■■□□ 2.05
CROCCP2-206ENST00000639594 FYCO1Q9BQS8 1478 aa27.87■■■□□ 2.05
CROCCP2-206ENST00000639594 ATP1B4Q9UN42 357 aaPredicted RBP27.87■■■□□ 2.05
CROCCP2-206ENST00000639594 ACIN1Q9UKV3 1341 aaKnown RBP27.86■■■□□ 2.05
CROCCP2-206ENST00000639594 CASKIN1Q8WXD9 1431 aa27.84■■■□□ 2.05
CROCCP2-206ENST00000639594 NEUROD1Q13562 356 aa27.83■■■□□ 2.05
CROCCP2-206ENST00000639594 RAB3GAP2Q9H2M9 1393 aa27.79■■■□□ 2.04
CROCCP2-206ENST00000639594 SNAPC4Q5SXM2 1469 aa27.78■■■□□ 2.04
CROCCP2-206ENST00000639594 SAMD9Q5K651 1589 aa27.77■■■□□ 2.04
CROCCP2-206ENST00000639594 FMN1Q68DA7 1419 aa27.75■■■□□ 2.03
CROCCP2-206ENST00000639594 CENPBP07199 599 aaPredicted RBP27.74■■■□□ 2.03
CROCCP2-206ENST00000639594 FAM50AQ14320 339 aaKnown RBP27.73■■■□□ 2.03
CROCCP2-206ENST00000639594 MIER1Q8N108 512 aa27.72■■■□□ 2.03
CROCCP2-206ENST00000639594 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
CROCCP2-206ENST00000639594 SETD5Q9C0A6 1442 aa27.71■■■□□ 2.03
CROCCP2-206ENST00000639594 MAPKBP1O60336 1514 aa27.67■■■□□ 2.02
CROCCP2-206ENST00000639594 MAGI1Q96QZ7 1491 aaPredicted RBP27.65■■■□□ 2.02
CROCCP2-206ENST00000639594 GRIN2AQ12879 1464 aa27.61■■■□□ 2.01
CROCCP2-206ENST00000639594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.58■■■□□ 2.014e-9■■□□□ 12.9
CROCCP2-206ENST00000639594 SYNJ2O15056 1496 aa27.57■■■□□ 2
CROCCP2-206ENST00000639594 IQGAP2Q13576 1575 aa27.55■■■□□ 2
CROCCP2-206ENST00000639594 MTUS2Q5JR59 1369 aa27.55■■■□□ 2
CROCCP2-206ENST00000639594 FGD6Q6ZV73 1430 aa27.54■■■□□ 2
CROCCP2-206ENST00000639594 YTHDC1Q96MU7 727 aaKnown RBP27.53■■■□□ 2
CROCCP2-206ENST00000639594 CHMP7Q8WUX9 453 aaPredicted RBP27.52■■■□□ 2
CROCCP2-206ENST00000639594 FBLN2P98095 1184 aa27.52■■■□□ 2
CROCCP2-206ENST00000639594 GTF3C3Q9Y5Q9 886 aa27.5■■□□□ 1.99
CROCCP2-206ENST00000639594 CEP170Q5SW79 1584 aa27.49■■□□□ 1.99
CROCCP2-206ENST00000639594 SUPT6HQ7KZ85 1726 aaKnown RBP27.48■■□□□ 1.99
CROCCP2-206ENST00000639594 NCOA2Q15596 1464 aa27.45■■□□□ 1.99
CROCCP2-206ENST00000639594 KIAA0586Q9BVV6 1533 aa27.45■■□□□ 1.98
CROCCP2-206ENST00000639594 EHBP1L1Q8N3D4 1523 aa27.44■■□□□ 1.98
CROCCP2-206ENST00000639594 SIN3AQ96ST3 1273 aa27.41■■□□□ 1.98
CROCCP2-206ENST00000639594 MYOM3Q5VTT5 1437 aa27.4■■□□□ 1.98
CROCCP2-206ENST00000639594 MAGI3Q5TCQ9 1506 aa27.4■■□□□ 1.98
CROCCP2-206ENST00000639594 UGGT2Q9NYU1 1516 aa27.39■■□□□ 1.98
CROCCP2-206ENST00000639594 PTPRKQ15262 1439 aa27.38■■□□□ 1.97
CROCCP2-206ENST00000639594 NUP160Q12769 1436 aa27.38■■□□□ 1.97
CROCCP2-206ENST00000639594 HECW1Q76N89 1606 aa27.38■■□□□ 1.97
CROCCP2-206ENST00000639594 CCDC18Q5T9S5 1454 aa27.37■■□□□ 1.97
CROCCP2-206ENST00000639594 CHD1O14646 1710 aa27.37■■□□□ 1.97
CROCCP2-206ENST00000639594 ARHGEF11O15085 1522 aa27.34■■□□□ 1.97
CROCCP2-206ENST00000639594 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
CROCCP2-206ENST00000639594 DISP1Q96F81 1524 aa27.32■■□□□ 1.96
CROCCP2-206ENST00000639594 HFM1A2PYH4 1435 aa27.31■■□□□ 1.96
CROCCP2-206ENST00000639594 EPRSP07814 1512 aaKnown RBP27.29■■□□□ 1.96
CROCCP2-206ENST00000639594 KIAA0556O60303 1618 aa27.29■■□□□ 1.96
CROCCP2-206ENST00000639594 CDK13Q14004 1512 aaKnown RBP27.25■■□□□ 1.95
CROCCP2-206ENST00000639594 TIMELESSQ9UNS1 1208 aa27.25■■□□□ 1.95
CROCCP2-206ENST00000639594 NAIPQ13075 1403 aa27.24■■□□□ 1.95
CROCCP2-206ENST00000639594 UACAQ9BZF9 1416 aa27.22■■□□□ 1.95
CROCCP2-206ENST00000639594 TCOF1Q13428 1488 aaKnown RBP27.21■■□□□ 1.95
CROCCP2-206ENST00000639594 JPH4Q96JJ6 628 aa27.2■■□□□ 1.94
CROCCP2-206ENST00000639594 PPP1R15AO75807 674 aaPredicted RBP27.16■■□□□ 1.94
CROCCP2-206ENST00000639594 ARID3CA6NKF2 412 aa27.15■■□□□ 1.94
CROCCP2-206ENST00000639594 GCC2Q8IWJ2 1684 aa27.14■■□□□ 1.94
CROCCP2-206ENST00000639594 RRP7BPQ9NSQ0 103 aa27.09■■□□□ 1.93
CROCCP2-206ENST00000639594 CHIC2Q9UKJ5 165 aa27.09■■□□□ 1.93
CROCCP2-206ENST00000639594 MIA2Q96PC5 1412 aa27.09■■□□□ 1.93
CROCCP2-206ENST00000639594 RAPGEF6Q8TEU7 1601 aa27.08■■□□□ 1.93
CROCCP2-206ENST00000639594 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
CROCCP2-206ENST00000639594 TONSLQ96HA7 1378 aa27.06■■□□□ 1.92
CROCCP2-206ENST00000639594 NUP153P49790 1475 aaKnown RBP27.04■■□□□ 1.92
CROCCP2-206ENST00000639594 KDM6BO15054 1643 aa27.04■■□□□ 1.92
CROCCP2-206ENST00000639594 PRG4Q92954 1404 aaPredicted RBP27.03■■□□□ 1.92
CROCCP2-206ENST00000639594 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
CROCCP2-206ENST00000639594 PELP1Q8IZL8 1130 aaKnown RBP27.01■■□□□ 1.91
CROCCP2-206ENST00000639594 AKNAQ7Z591 1439 aa27.01■■□□□ 1.91
CROCCP2-206ENST00000639594 DDX10Q13206 875 aaKnown RBP27■■□□□ 1.91
CROCCP2-206ENST00000639594 PLB1Q6P1J6 1458 aa26.99■■□□□ 1.91
CROCCP2-206ENST00000639594 HIRIP3Q9BW71 556 aaPredicted RBP26.99■■□□□ 1.91
CROCCP2-206ENST00000639594 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
CROCCP2-206ENST00000639594 DENND4BO75064 1496 aaPredicted RBP26.96■■□□□ 1.91
CROCCP2-206ENST00000639594 ERCC6L2Q5T890 1561 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms