RNA–Protein interactions for RNA: ENST00000639260.1

SCN1B-207, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 3

Gene SCN1B, Length 1,430 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-207ENST00000639260 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
SCN1B-207ENST00000639260 CTTNBP2Q8WZ74 1663 aa28.63■■■□□ 2.17
SCN1B-207ENST00000639260 KIAA0586Q9BVV6 1533 aa28.61■■■□□ 2.17
SCN1B-207ENST00000639260 IQGAP2Q13576 1575 aa28.53■■■□□ 2.16
SCN1B-207ENST00000639260 OSCARQ8IYS5 282 aa28.51■■■□□ 2.15
SCN1B-207ENST00000639260 CEP162Q5TB80 1403 aa28.5■■■□□ 2.15
SCN1B-207ENST00000639260 CLASP1Q7Z460 1538 aa28.46■■■□□ 2.15
SCN1B-207ENST00000639260 CLIP1P30622 1438 aa28.44■■■□□ 2.14
SCN1B-207ENST00000639260 UGGT2Q9NYU1 1516 aa28.43■■■□□ 2.14
SCN1B-207ENST00000639260 RANGAP1P46060 587 aaPredicted RBP28.43■■■□□ 2.14
SCN1B-207ENST00000639260 JPH4Q96JJ6 628 aa28.43■■■□□ 2.14
SCN1B-207ENST00000639260 ARHGAP35Q9NRY4 1499 aa28.36■■■□□ 2.13
SCN1B-207ENST00000639260 EFCAB5A4FU69 1503 aa28.36■■■□□ 2.13
SCN1B-207ENST00000639260 SHROOM2Q13796 1616 aa28.35■■■□□ 2.13
SCN1B-207ENST00000639260 SAMD9Q5K651 1589 aa28.34■■■□□ 2.13
SCN1B-207ENST00000639260 DISP1Q96F81 1524 aa28.3■■■□□ 2.12
SCN1B-207ENST00000639260 PRG4Q92954 1404 aaPredicted RBP28.27■■■□□ 2.12
SCN1B-207ENST00000639260 CARMIL2Q6F5E8 1435 aa28.26■■■□□ 2.11
SCN1B-207ENST00000639260 KIAA0556O60303 1618 aa28.26■■■□□ 2.11
SCN1B-207ENST00000639260 P3H3Q8IVL6 736 aa28.25■■■□□ 2.11
SCN1B-207ENST00000639260 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
SCN1B-207ENST00000639260 FHOD3Q2V2M9 1422 aa28.21■■■□□ 2.11
SCN1B-207ENST00000639260 ERCC6L2Q5T890 1561 aa28.14■■■□□ 2.1
SCN1B-207ENST00000639260 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
SCN1B-207ENST00000639260 FMN1Q68DA7 1419 aa28.1■■■□□ 2.09
SCN1B-207ENST00000639260 PTPRGP23470 1445 aa28.04■■■□□ 2.08
SCN1B-207ENST00000639260 TTBK1Q5TCY1 1321 aaPredicted RBP28■■■□□ 2.07
SCN1B-207ENST00000639260 ARHGEF11O15085 1522 aa27.99■■■□□ 2.07
SCN1B-207ENST00000639260 CASKIN1Q8WXD9 1431 aa27.98■■■□□ 2.07
SCN1B-207ENST00000639260 PCF11O94913 1555 aaKnown RBP27.94■■■□□ 2.06
SCN1B-207ENST00000639260 FYCO1Q9BQS8 1478 aa27.94■■■□□ 2.06
SCN1B-207ENST00000639260 ABCA8O94911 1581 aa27.91■■■□□ 2.06
SCN1B-207ENST00000639260 PLB1Q6P1J6 1458 aa27.91■■■□□ 2.06
SCN1B-207ENST00000639260 RIMBP3CA6NJZ7 1639 aa27.91■■■□□ 2.06
SCN1B-207ENST00000639260 RIMBP3BA6NNM3 1639 aa27.91■■■□□ 2.06
SCN1B-207ENST00000639260 RIMBP3Q9UFD9 1639 aa27.91■■■□□ 2.06
SCN1B-207ENST00000639260 RAPGEF6Q8TEU7 1601 aa27.9■■■□□ 2.06
SCN1B-207ENST00000639260 UACAQ9BZF9 1416 aa27.88■■■□□ 2.05
SCN1B-207ENST00000639260 ATP1B4Q9UN42 357 aaPredicted RBP27.85■■■□□ 2.05
SCN1B-207ENST00000639260 HECW1Q76N89 1606 aa27.85■■■□□ 2.05
SCN1B-207ENST00000639260 NUP153P49790 1475 aaKnown RBP27.82■■■□□ 2.04
SCN1B-207ENST00000639260 UHRF1BP1LA0JNW5 1464 aa27.81■■■□□ 2.04
SCN1B-207ENST00000639260 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
SCN1B-207ENST00000639260 APLP2Q06481 763 aa27.8■■■□□ 2.04
SCN1B-207ENST00000639260 MAP3K1Q13233 1512 aa27.79■■■□□ 2.04
SCN1B-207ENST00000639260 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
SCN1B-207ENST00000639260 CCDC18Q5T9S5 1454 aa27.77■■■□□ 2.04
SCN1B-207ENST00000639260 LRRIQ1Q96JM4 1722 aa27.75■■■□□ 2.03
SCN1B-207ENST00000639260 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
SCN1B-207ENST00000639260 CYB5RLQ6IPT4 315 aa27.73■■■□□ 2.03
SCN1B-207ENST00000639260 TIAM1Q13009 1591 aa27.73■■■□□ 2.03
SCN1B-207ENST00000639260 ADCY10Q96PN6 1610 aa27.72■■■□□ 2.03
SCN1B-207ENST00000639260 ATP10BO94823 1461 aa27.71■■■□□ 2.03
SCN1B-207ENST00000639260 CFAP43Q8NDM7 1665 aa27.7■■■□□ 2.02
SCN1B-207ENST00000639260 CDK13Q14004 1512 aaKnown RBP27.69■■■□□ 2.02
SCN1B-207ENST00000639260 ARID3CA6NKF2 412 aa27.68■■■□□ 2.02
SCN1B-207ENST00000639260 KDM5BQ9UGL1 1544 aa27.68■■■□□ 2.02
SCN1B-207ENST00000639260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.64■■■□□ 2.02
SCN1B-207ENST00000639260 HNRNPUL2Q1KMD3 747 aaKnown RBP27.64■■■□□ 2.02
SCN1B-207ENST00000639260 KANK4Q5T7N3 995 aaPredicted RBP27.63■■■□□ 2.01
SCN1B-207ENST00000639260 LRRC9Q6ZRR7 1453 aa27.62■■■□□ 2.01
SCN1B-207ENST00000639260 CDK11AQ9UQ88 783 aaPredicted RBP27.61■■■□□ 2.01
SCN1B-207ENST00000639260 ZCCHC11Q5TAX3 1644 aaKnown RBP27.6■■■□□ 2.01
SCN1B-207ENST00000639260 NPM1P06748 294 aaKnown RBP eCLIP27.57■■■□□ 2
SCN1B-207ENST00000639260 PPARGC1BQ86YN6 1023 aaKnown RBP27.57■■■□□ 2
SCN1B-207ENST00000639260 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
SCN1B-207ENST00000639260 MAGI3Q5TCQ9 1506 aa27.55■■■□□ 2
SCN1B-207ENST00000639260 PLEKHD1A6NEE1 506 aa27.55■■■□□ 2
SCN1B-207ENST00000639260 EHBP1L1Q8N3D4 1523 aa27.53■■■□□ 2
SCN1B-207ENST00000639260 TROQ12816 1431 aaPredicted RBP27.52■■■□□ 2
SCN1B-207ENST00000639260 ASXL2Q76L83 1435 aa27.43■■□□□ 1.98
SCN1B-207ENST00000639260 WDR7Q9Y4E6 1490 aa27.41■■□□□ 1.98
SCN1B-207ENST00000639260 SUPT6HQ7KZ85 1726 aaKnown RBP27.41■■□□□ 1.98
SCN1B-207ENST00000639260 MAPKBP1O60336 1514 aa27.4■■□□□ 1.98
SCN1B-207ENST00000639260 NCOA2Q15596 1464 aa27.39■■□□□ 1.97
SCN1B-207ENST00000639260 KIF14Q15058 1648 aa27.36■■□□□ 1.97
SCN1B-207ENST00000639260 KCNH8Q96L42 1107 aa27.33■■□□□ 1.97
SCN1B-207ENST00000639260 ABCC10Q5T3U5 1492 aa27.31■■□□□ 1.96
SCN1B-207ENST00000639260 PHLDB1Q86UU1 1377 aa27.3■■□□□ 1.96
SCN1B-207ENST00000639260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.27■■□□□ 1.96
SCN1B-207ENST00000639260 CCNB3Q8WWL7 1395 aa27.25■■□□□ 1.95
SCN1B-207ENST00000639260 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
SCN1B-207ENST00000639260 GPATCH8Q9UKJ3 1502 aaKnown RBP27.22■■□□□ 1.95
SCN1B-207ENST00000639260 TTC37Q6PGP7 1564 aa27.21■■□□□ 1.95
SCN1B-207ENST00000639260 ABCA9Q8IUA7 1624 aa27.2■■□□□ 1.94
SCN1B-207ENST00000639260 RRBP1Q9P2E9 1410 aaKnown RBP27.19■■□□□ 1.94
SCN1B-207ENST00000639260 FGD6Q6ZV73 1430 aa27.17■■□□□ 1.94
SCN1B-207ENST00000639260 MIA2Q96PC5 1412 aa27.17■■□□□ 1.94
SCN1B-207ENST00000639260 GLI2P10070 1586 aa27.17■■□□□ 1.94
SCN1B-207ENST00000639260 TRIM26Q12899 539 aaPredicted RBP27.16■■□□□ 1.94
SCN1B-207ENST00000639260 ITSN2Q9NZM3 1697 aa27.16■■□□□ 1.94
SCN1B-207ENST00000639260 CDC42BPAQ5VT25 1732 aa27.16■■□□□ 1.94
SCN1B-207ENST00000639260 DIP2BQ9P265 1576 aa27.14■■□□□ 1.94
SCN1B-207ENST00000639260 PLCH2O75038 1416 aa27.14■■□□□ 1.94
SCN1B-207ENST00000639260 CFDP1Q9UEE9 299 aaPredicted RBP27.14■■□□□ 1.93
SCN1B-207ENST00000639260 MYO5CQ9NQX4 1742 aa27.12■■□□□ 1.93
SCN1B-207ENST00000639260 PREX2Q70Z35 1606 aa27.12■■□□□ 1.93
SCN1B-207ENST00000639260 ARAP3Q8WWN8 1544 aa27.1■■□□□ 1.93
SCN1B-207ENST00000639260 FAM69CQ0P6D2 419 aa27.1■■□□□ 1.93
SCN1B-207ENST00000639260 CDC42BPBQ9Y5S2 1711 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms