RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 NUP160Q12769 1436 aa23.56■■□□□ 1.36
CNTNAP2-225ENST00000639247 CTTNBP2Q8WZ74 1663 aa23.52■■□□□ 1.36
CNTNAP2-225ENST00000639247 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
CNTNAP2-225ENST00000639247 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
CNTNAP2-225ENST00000639247 KIAA0586Q9BVV6 1533 aa23.47■■□□□ 1.35
CNTNAP2-225ENST00000639247 IQGAP2Q13576 1575 aa23.45■■□□□ 1.35
CNTNAP2-225ENST00000639247 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
CNTNAP2-225ENST00000639247 P3H3Q8IVL6 736 aa23.42■■□□□ 1.34
CNTNAP2-225ENST00000639247 JPH4Q96JJ6 628 aa23.41■■□□□ 1.34
CNTNAP2-225ENST00000639247 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
CNTNAP2-225ENST00000639247 CLIP1P30622 1438 aa23.35■■□□□ 1.33
CNTNAP2-225ENST00000639247 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
CNTNAP2-225ENST00000639247 TTBK1Q5TCY1 1321 aaPredicted RBP23.34■■□□□ 1.33
CNTNAP2-225ENST00000639247 ARHGAP35Q9NRY4 1499 aa23.32■■□□□ 1.32
CNTNAP2-225ENST00000639247 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
CNTNAP2-225ENST00000639247 UGGT2Q9NYU1 1516 aa23.31■■□□□ 1.32
CNTNAP2-225ENST00000639247 DISP1Q96F81 1524 aa23.3■■□□□ 1.32
CNTNAP2-225ENST00000639247 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
CNTNAP2-225ENST00000639247 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
CNTNAP2-225ENST00000639247 ARAP1Q96P48 1450 aa23.25■■□□□ 1.31
CNTNAP2-225ENST00000639247 SAMD9Q5K651 1589 aa23.25■■□□□ 1.31
CNTNAP2-225ENST00000639247 KIAA0556O60303 1618 aa23.23■■□□□ 1.31
CNTNAP2-225ENST00000639247 EFCAB5A4FU69 1503 aa23.18■■□□□ 1.3
CNTNAP2-225ENST00000639247 CARMIL2Q6F5E8 1435 aa23.17■■□□□ 1.3
CNTNAP2-225ENST00000639247 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
CNTNAP2-225ENST00000639247 RIMBP3CA6NJZ7 1639 aa23.09■■□□□ 1.29
CNTNAP2-225ENST00000639247 RIMBP3BA6NNM3 1639 aa23.09■■□□□ 1.29
CNTNAP2-225ENST00000639247 RIMBP3Q9UFD9 1639 aa23.09■■□□□ 1.29
CNTNAP2-225ENST00000639247 PTPRGP23470 1445 aa23.08■■□□□ 1.29
CNTNAP2-225ENST00000639247 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
CNTNAP2-225ENST00000639247 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
CNTNAP2-225ENST00000639247 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
CNTNAP2-225ENST00000639247 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
CNTNAP2-225ENST00000639247 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
CNTNAP2-225ENST00000639247 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
CNTNAP2-225ENST00000639247 FMN1Q68DA7 1419 aa23■■□□□ 1.27
CNTNAP2-225ENST00000639247 DNAJC5Q9H3Z4 198 aa22.99■■□□□ 1.27
CNTNAP2-225ENST00000639247 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
CNTNAP2-225ENST00000639247 ABCA8O94911 1581 aa22.93■■□□□ 1.26
CNTNAP2-225ENST00000639247 RAPGEF6Q8TEU7 1601 aa22.93■■□□□ 1.26
CNTNAP2-225ENST00000639247 LRRIQ1Q96JM4 1722 aa22.92■■□□□ 1.26
CNTNAP2-225ENST00000639247 CASKIN1Q8WXD9 1431 aa22.92■■□□□ 1.26
CNTNAP2-225ENST00000639247 UACAQ9BZF9 1416 aa22.92■■□□□ 1.26
CNTNAP2-225ENST00000639247 NUP153P49790 1475 aaKnown RBP22.9■■□□□ 1.26
CNTNAP2-225ENST00000639247 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
CNTNAP2-225ENST00000639247 FYCO1Q9BQS8 1478 aa22.88■■□□□ 1.25
CNTNAP2-225ENST00000639247 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
CNTNAP2-225ENST00000639247 ABCC2Q92887 1545 aa22.85■■□□□ 1.25
CNTNAP2-225ENST00000639247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
CNTNAP2-225ENST00000639247 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
CNTNAP2-225ENST00000639247 HECW1Q76N89 1606 aa22.84■■□□□ 1.25
CNTNAP2-225ENST00000639247 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
CNTNAP2-225ENST00000639247 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
CNTNAP2-225ENST00000639247 ATP10BO94823 1461 aa22.81■■□□□ 1.24
CNTNAP2-225ENST00000639247 UHRF1BP1LA0JNW5 1464 aa22.78■■□□□ 1.24
CNTNAP2-225ENST00000639247 APLP2Q06481 763 aa22.77■■□□□ 1.23
CNTNAP2-225ENST00000639247 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
CNTNAP2-225ENST00000639247 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
CNTNAP2-225ENST00000639247 MAGI3Q5TCQ9 1506 aa22.74■■□□□ 1.23
CNTNAP2-225ENST00000639247 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
CNTNAP2-225ENST00000639247 CFAP43Q8NDM7 1665 aa22.71■■□□□ 1.23
CNTNAP2-225ENST00000639247 CCDC18Q5T9S5 1454 aa22.7■■□□□ 1.22
CNTNAP2-225ENST00000639247 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
CNTNAP2-225ENST00000639247 LRRC9Q6ZRR7 1453 aa22.65■■□□□ 1.22
CNTNAP2-225ENST00000639247 KCNH8Q96L42 1107 aa22.64■■□□□ 1.22
CNTNAP2-225ENST00000639247 MTUS2Q5JR59 1369 aa22.64■■□□□ 1.21
CNTNAP2-225ENST00000639247 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
CNTNAP2-225ENST00000639247 MAP3K1Q13233 1512 aa22.63■■□□□ 1.21
CNTNAP2-225ENST00000639247 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
CNTNAP2-225ENST00000639247 CDK11AQ9UQ88 783 aaPredicted RBP22.59■■□□□ 1.21
CNTNAP2-225ENST00000639247 KIF14Q15058 1648 aa22.58■■□□□ 1.2
CNTNAP2-225ENST00000639247 TROQ12816 1431 aaPredicted RBP22.57■■□□□ 1.2
CNTNAP2-225ENST00000639247 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
CNTNAP2-225ENST00000639247 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
CNTNAP2-225ENST00000639247 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
CNTNAP2-225ENST00000639247 NCOA2Q15596 1464 aa22.5■■□□□ 1.19
CNTNAP2-225ENST00000639247 PHLDB1Q86UU1 1377 aa22.48■■□□□ 1.19
CNTNAP2-225ENST00000639247 SUPT6HQ7KZ85 1726 aaKnown RBP22.47■■□□□ 1.19
CNTNAP2-225ENST00000639247 TTC37Q6PGP7 1564 aa22.46■■□□□ 1.19
CNTNAP2-225ENST00000639247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.46■■□□□ 1.19
CNTNAP2-225ENST00000639247 ABCC10Q5T3U5 1492 aa22.43■■□□□ 1.18
CNTNAP2-225ENST00000639247 FAM69CQ0P6D2 419 aa22.42■■□□□ 1.18
CNTNAP2-225ENST00000639247 CCNB3Q8WWL7 1395 aa22.39■■□□□ 1.18
CNTNAP2-225ENST00000639247 DIP2BQ9P265 1576 aa22.38■■□□□ 1.17
CNTNAP2-225ENST00000639247 GPATCH8Q9UKJ3 1502 aaKnown RBP22.37■■□□□ 1.17
CNTNAP2-225ENST00000639247 CDC42BPAQ5VT25 1732 aa22.36■■□□□ 1.17
CNTNAP2-225ENST00000639247 ZNF644Q9H582 1327 aaPredicted RBP22.36■■□□□ 1.17
CNTNAP2-225ENST00000639247 KIF13AQ9H1H9 1805 aa22.35■■□□□ 1.17
CNTNAP2-225ENST00000639247 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
CNTNAP2-225ENST00000639247 MYOM3Q5VTT5 1437 aa22.34■■□□□ 1.17
CNTNAP2-225ENST00000639247 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
CNTNAP2-225ENST00000639247 ZNF777Q9ULD5 760 aaPredicted RBP22.34■■□□□ 1.17
CNTNAP2-225ENST00000639247 CDC42BPBQ9Y5S2 1711 aa22.33■■□□□ 1.16
CNTNAP2-225ENST00000639247 CFDP1Q9UEE9 299 aaPredicted RBP22.32■■□□□ 1.16
CNTNAP2-225ENST00000639247 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
CNTNAP2-225ENST00000639247 CD109Q6YHK3 1445 aa22.31■■□□□ 1.16
CNTNAP2-225ENST00000639247 MYO5CQ9NQX4 1742 aa22.3■■□□□ 1.16
CNTNAP2-225ENST00000639247 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
CNTNAP2-225ENST00000639247 FAM50AQ14320 339 aaKnown RBP22.29■■□□□ 1.16
CNTNAP2-225ENST00000639247 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms