RNA–Protein interactions for RNA: ENST00000639042.1

GFAP-231, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-231ENST00000639042 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
GFAP-231ENST00000639042 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.47
GFAP-231ENST00000639042 EFCAB5A4FU69 1503 aa17.9■□□□□ 0.46
GFAP-231ENST00000639042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.9■□□□□ 0.46
GFAP-231ENST00000639042 CHD1O14646 1710 aa17.89■□□□□ 0.45
GFAP-231ENST00000639042 CTTNBP2Q8WZ74 1663 aa17.89■□□□□ 0.45
GFAP-231ENST00000639042 RIMBP3CA6NJZ7 1639 aa17.88■□□□□ 0.45
GFAP-231ENST00000639042 RIMBP3BA6NNM3 1639 aa17.88■□□□□ 0.45
GFAP-231ENST00000639042 RIMBP3Q9UFD9 1639 aa17.88■□□□□ 0.45
GFAP-231ENST00000639042 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
GFAP-231ENST00000639042 RRBP1Q9P2E9 1410 aaKnown RBP17.88■□□□□ 0.45
GFAP-231ENST00000639042 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
GFAP-231ENST00000639042 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
GFAP-231ENST00000639042 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
GFAP-231ENST00000639042 FBLN2P98095 1184 aa17.85■□□□□ 0.45
GFAP-231ENST00000639042 RANGAP1P46060 587 aaPredicted RBP17.84■□□□□ 0.45
GFAP-231ENST00000639042 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
GFAP-231ENST00000639042 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
GFAP-231ENST00000639042 TIAM1Q13009 1591 aa17.83■□□□□ 0.45
GFAP-231ENST00000639042 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.45
GFAP-231ENST00000639042 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
GFAP-231ENST00000639042 CFAP43Q8NDM7 1665 aa17.78■□□□□ 0.44
GFAP-231ENST00000639042 SAMD9Q5K651 1589 aa17.77■□□□□ 0.44
GFAP-231ENST00000639042 SNAPC4Q5SXM2 1469 aa17.77■□□□□ 0.44
GFAP-231ENST00000639042 CASKIN1Q8WXD9 1431 aa17.76■□□□□ 0.43
GFAP-231ENST00000639042 FYCO1Q9BQS8 1478 aa17.76■□□□□ 0.43
GFAP-231ENST00000639042 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
GFAP-231ENST00000639042 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
GFAP-231ENST00000639042 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
GFAP-231ENST00000639042 GRIN2BQ13224 1484 aa17.72■□□□□ 0.43
GFAP-231ENST00000639042 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
GFAP-231ENST00000639042 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
GFAP-231ENST00000639042 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
GFAP-231ENST00000639042 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
GFAP-231ENST00000639042 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.43
GFAP-231ENST00000639042 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.43
GFAP-231ENST00000639042 CCNB3Q8WWL7 1395 aa17.71■□□□□ 0.43
GFAP-231ENST00000639042 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
GFAP-231ENST00000639042 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
GFAP-231ENST00000639042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.66■□□□□ 0.42
GFAP-231ENST00000639042 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
GFAP-231ENST00000639042 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
GFAP-231ENST00000639042 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
GFAP-231ENST00000639042 DHX57Q6P158 1386 aaKnown RBP17.58■□□□□ 0.41
GFAP-231ENST00000639042 PHLDB1Q86UU1 1377 aa17.58■□□□□ 0.41
GFAP-231ENST00000639042 IQGAP2Q13576 1575 aa17.58■□□□□ 0.4
GFAP-231ENST00000639042 UGGT2Q9NYU1 1516 aa17.57■□□□□ 0.4
GFAP-231ENST00000639042 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
GFAP-231ENST00000639042 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
GFAP-231ENST00000639042 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.4
GFAP-231ENST00000639042 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
GFAP-231ENST00000639042 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
GFAP-231ENST00000639042 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
GFAP-231ENST00000639042 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
GFAP-231ENST00000639042 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
GFAP-231ENST00000639042 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
GFAP-231ENST00000639042 HECW1Q76N89 1606 aa17.46■□□□□ 0.38
GFAP-231ENST00000639042 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
GFAP-231ENST00000639042 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
GFAP-231ENST00000639042 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
GFAP-231ENST00000639042 NUP160Q12769 1436 aa17.43■□□□□ 0.38
GFAP-231ENST00000639042 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
GFAP-231ENST00000639042 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
GFAP-231ENST00000639042 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
GFAP-231ENST00000639042 DISP1Q96F81 1524 aa17.41■□□□□ 0.38
GFAP-231ENST00000639042 KIAA0556O60303 1618 aa17.4■□□□□ 0.38
GFAP-231ENST00000639042 NCOA2Q15596 1464 aa17.4■□□□□ 0.38
GFAP-231ENST00000639042 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
GFAP-231ENST00000639042 EPRSP07814 1512 aaKnown RBP17.39■□□□□ 0.37
GFAP-231ENST00000639042 MAGI3Q5TCQ9 1506 aa17.38■□□□□ 0.37
GFAP-231ENST00000639042 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
GFAP-231ENST00000639042 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
GFAP-231ENST00000639042 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
GFAP-231ENST00000639042 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
GFAP-231ENST00000639042 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
GFAP-231ENST00000639042 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
GFAP-231ENST00000639042 FAM50AQ14320 339 aaKnown RBP17.32■□□□□ 0.36
GFAP-231ENST00000639042 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
GFAP-231ENST00000639042 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
GFAP-231ENST00000639042 PTPN23Q9H3S7 1636 aa17.31■□□□□ 0.36
GFAP-231ENST00000639042 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
GFAP-231ENST00000639042 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
GFAP-231ENST00000639042 ITGAEP38570 1179 aa17.28■□□□□ 0.36
GFAP-231ENST00000639042 PTPRKQ15262 1439 aa17.28■□□□□ 0.36
GFAP-231ENST00000639042 AKNAQ7Z591 1439 aa17.28■□□□□ 0.36
GFAP-231ENST00000639042 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.36
GFAP-231ENST00000639042 NUP153P49790 1475 aaKnown RBP17.27■□□□□ 0.35
GFAP-231ENST00000639042 CDK13Q14004 1512 aaKnown RBP17.24■□□□□ 0.35
GFAP-231ENST00000639042 NAIPQ13075 1403 aa17.23■□□□□ 0.35
GFAP-231ENST00000639042 CARMIL2Q6F5E8 1435 aa17.22■□□□□ 0.35
GFAP-231ENST00000639042 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
GFAP-231ENST00000639042 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
GFAP-231ENST00000639042 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
GFAP-231ENST00000639042 ADCY10Q96PN6 1610 aa17.19■□□□□ 0.34
GFAP-231ENST00000639042 CDK11AQ9UQ88 783 aaPredicted RBP17.17■□□□□ 0.34
GFAP-231ENST00000639042 ABCA8O94911 1581 aa17.16■□□□□ 0.34
GFAP-231ENST00000639042 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
GFAP-231ENST00000639042 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
GFAP-231ENST00000639042 DNMT1P26358 1616 aaKnown RBP17.11■□□□□ 0.33
GFAP-231ENST00000639042 KIF13AQ9H1H9 1805 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms