RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 FAM9AQ8IZU1 332 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-213ENST00000638883 SAMD9Q5K651 1589 aa10.87□□□□□ -0.67
NECAP1-213ENST00000638883 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
NECAP1-213ENST00000638883 YTHDC1Q96MU7 727 aaKnown RBP10.82□□□□□ -0.68
NECAP1-213ENST00000638883 CUX2O14529 1486 aa10.81□□□□□ -0.68
NECAP1-213ENST00000638883 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
NECAP1-213ENST00000638883 RUSC2Q8N2Y8 1516 aa10.78□□□□□ -0.68
NECAP1-213ENST00000638883 CUL7Q14999 1698 aa10.78□□□□□ -0.68
NECAP1-213ENST00000638883 CFAP43Q8NDM7 1665 aa10.78□□□□□ -0.68
NECAP1-213ENST00000638883 NESP48681 1621 aa10.77□□□□□ -0.69
NECAP1-213ENST00000638883 PRXQ9BXM0 1461 aa10.76□□□□□ -0.69
NECAP1-213ENST00000638883 ABCA10Q8WWZ4 1543 aa10.75□□□□□ -0.69
NECAP1-213ENST00000638883 ANP32EQ9BTT0 268 aa10.75□□□□□ -0.69
NECAP1-213ENST00000638883 ADAMTS12P58397 1594 aa10.75□□□□□ -0.69
NECAP1-213ENST00000638883 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
NECAP1-213ENST00000638883 DIEXFQ68CQ4 756 aaKnown RBP10.73□□□□□ -0.69
NECAP1-213ENST00000638883 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
NECAP1-213ENST00000638883 TOPBP1Q92547 1522 aa10.72□□□□□ -0.69
NECAP1-213ENST00000638883 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
NECAP1-213ENST00000638883 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-213ENST00000638883 POLA1P09884 1462 aaPredicted RBP10.65□□□□□ -0.7
NECAP1-213ENST00000638883 CHD1O14646 1710 aa10.65□□□□□ -0.71
NECAP1-213ENST00000638883 CCER1Q8TC90 406 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-213ENST00000638883 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
NECAP1-213ENST00000638883 ADCY10Q96PN6 1610 aa10.61□□□□□ -0.71
NECAP1-213ENST00000638883 CLASP1Q7Z460 1538 aa10.6□□□□□ -0.71
NECAP1-213ENST00000638883 CEP170Q5SW79 1584 aa10.59□□□□□ -0.71
NECAP1-213ENST00000638883 CADPSQ9ULU8 1353 aa10.58□□□□□ -0.72
NECAP1-213ENST00000638883 FANCD2Q9BXW9 1451 aa10.56□□□□□ -0.72
NECAP1-213ENST00000638883 SOGA1O94964 1423 aa10.56□□□□□ -0.72
NECAP1-213ENST00000638883 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
NECAP1-213ENST00000638883 WRNQ14191 1432 aaPredicted RBP eCLIP10.54□□□□□ -0.72
NECAP1-213ENST00000638883 SNAPC4Q5SXM2 1469 aa10.53□□□□□ -0.72
NECAP1-213ENST00000638883 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
NECAP1-213ENST00000638883 CROCC2H7BZ55 1655 aa10.52□□□□□ -0.72
NECAP1-213ENST00000638883 ARAP1Q96P48 1450 aa10.52□□□□□ -0.73
NECAP1-213ENST00000638883 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
NECAP1-213ENST00000638883 PKD2Q13563 968 aa10.5□□□□□ -0.73
NECAP1-213ENST00000638883 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-213ENST00000638883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.49□□□□□ -0.73
NECAP1-213ENST00000638883 APLP2Q06481 763 aa10.48□□□□□ -0.73
NECAP1-213ENST00000638883 MRC2Q9UBG0 1479 aa10.46□□□□□ -0.74
NECAP1-213ENST00000638883 MAGI3Q5TCQ9 1506 aa10.46□□□□□ -0.74
NECAP1-213ENST00000638883 MAP3K1Q13233 1512 aa10.45□□□□□ -0.74
NECAP1-213ENST00000638883 UGGT2Q9NYU1 1516 aa10.44□□□□□ -0.74
NECAP1-213ENST00000638883 RAPGEF2Q9Y4G8 1499 aa10.43□□□□□ -0.74
NECAP1-213ENST00000638883 ZNF219Q9P2Y4 722 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-213ENST00000638883 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
NECAP1-213ENST00000638883 IQGAP2Q13576 1575 aa10.41□□□□□ -0.74
NECAP1-213ENST00000638883 PPRC1Q5VV67 1664 aaKnown RBP10.41□□□□□ -0.74
NECAP1-213ENST00000638883 DISP1Q96F81 1524 aa10.4□□□□□ -0.74
NECAP1-213ENST00000638883 KIAA0556O60303 1618 aa10.4□□□□□ -0.74
NECAP1-213ENST00000638883 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.75
NECAP1-213ENST00000638883 CDC42BPAQ5VT25 1732 aa10.39□□□□□ -0.75
NECAP1-213ENST00000638883 TSHZ2Q9NRE2 1034 aa10.39□□□□□ -0.75
NECAP1-213ENST00000638883 CEP164Q9UPV0 1460 aa10.39□□□□□ -0.75
NECAP1-213ENST00000638883 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
NECAP1-213ENST00000638883 EEA1Q15075 1411 aa10.38□□□□□ -0.75
NECAP1-213ENST00000638883 BCORL1Q5H9F3 1711 aa10.37□□□□□ -0.75
NECAP1-213ENST00000638883 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
NECAP1-213ENST00000638883 ARHGAP35Q9NRY4 1499 aa10.36□□□□□ -0.75
NECAP1-213ENST00000638883 ABCA8O94911 1581 aa10.36□□□□□ -0.75
NECAP1-213ENST00000638883 KDM5BQ9UGL1 1544 aa10.36□□□□□ -0.75
NECAP1-213ENST00000638883 NUP160Q12769 1436 aa10.35□□□□□ -0.75
NECAP1-213ENST00000638883 ZNF316A6NFI3 1004 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-213ENST00000638883 BCANQ96GW7 911 aa10.34□□□□□ -0.75
NECAP1-213ENST00000638883 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-213ENST00000638883 KDM2AQ9Y2K7 1162 aa10.34□□□□□ -0.75
NECAP1-213ENST00000638883 GRIN2BQ13224 1484 aa10.34□□□□□ -0.75
NECAP1-213ENST00000638883 CDC42BPBQ9Y5S2 1711 aa10.34□□□□□ -0.75
NECAP1-213ENST00000638883 SIGLEC1Q9BZZ2 1709 aa10.33□□□□□ -0.76
NECAP1-213ENST00000638883 SUPT16HQ9Y5B9 1047 aaKnown RBP10.33□□□□□ -0.76
NECAP1-213ENST00000638883 NPM1P06748 294 aaKnown RBP eCLIP10.32□□□□□ -0.76
NECAP1-213ENST00000638883 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.766e-7■■■■■ 30.6
NECAP1-213ENST00000638883 EFCAB5A4FU69 1503 aa10.32□□□□□ -0.76
NECAP1-213ENST00000638883 IGF1RP08069 1367 aa10.32□□□□□ -0.76
NECAP1-213ENST00000638883 CLSPNQ9HAW4 1339 aa10.32□□□□□ -0.76
NECAP1-213ENST00000638883 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
NECAP1-213ENST00000638883 GCC2Q8IWJ2 1684 aa10.31□□□□□ -0.76
NECAP1-213ENST00000638883 MIER1Q8N108 512 aa10.31□□□□□ -0.76
NECAP1-213ENST00000638883 ERCC6L2Q5T890 1561 aa10.3□□□□□ -0.76
NECAP1-213ENST00000638883 TIAM1Q13009 1591 aa10.28□□□□□ -0.76
NECAP1-213ENST00000638883 VASPP50552 380 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-213ENST00000638883 IFT140Q96RY7 1462 aa10.27□□□□□ -0.77
NECAP1-213ENST00000638883 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
NECAP1-213ENST00000638883 NEFLP07196 543 aa10.27□□□□□ -0.77
NECAP1-213ENST00000638883 DENND4BO75064 1496 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-213ENST00000638883 SPDYE4A6NLX3 237 aa10.25□□□□□ -0.77
NECAP1-213ENST00000638883 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
NECAP1-213ENST00000638883 KIF13AQ9H1H9 1805 aa10.24□□□□□ -0.77
NECAP1-213ENST00000638883 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
NECAP1-213ENST00000638883 EIF5BO60841 1220 aaKnown RBP10.23□□□□□ -0.77
NECAP1-213ENST00000638883 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-213ENST00000638883 TNIKQ9UKE5 1360 aa10.21□□□□□ -0.77
NECAP1-213ENST00000638883 ADGBQ8N7X0 1667 aa10.2□□□□□ -0.78
NECAP1-213ENST00000638883 DEKP35659 375 aaKnown RBP10.2□□□□□ -0.78
NECAP1-213ENST00000638883 GOLGA3Q08378 1498 aa10.19□□□□□ -0.78
NECAP1-213ENST00000638883 DEPDC5O75140 1603 aa10.19□□□□□ -0.78
NECAP1-213ENST00000638883 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
NECAP1-213ENST00000638883 ABCA9Q8IUA7 1624 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms