RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 PRXQ9BXM0 1461 aa14.8□□□□□ -0.04
NECAP1-212ENST00000638787 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
NECAP1-212ENST00000638787 SHROOM2Q13796 1616 aa14.78□□□□□ -0.04
NECAP1-212ENST00000638787 KIAA0586Q9BVV6 1533 aa14.78□□□□□ -0.04
NECAP1-212ENST00000638787 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
NECAP1-212ENST00000638787 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
NECAP1-212ENST00000638787 JPH4Q96JJ6 628 aa14.73□□□□□ -0.05
NECAP1-212ENST00000638787 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
NECAP1-212ENST00000638787 IQGAP2Q13576 1575 aa14.72□□□□□ -0.05
NECAP1-212ENST00000638787 PRG4Q92954 1404 aaPredicted RBP14.71□□□□□ -0.05
NECAP1-212ENST00000638787 CTTNBP2Q8WZ74 1663 aa14.7□□□□□ -0.06
NECAP1-212ENST00000638787 KIF21BO75037 1637 aa14.69□□□□□ -0.06
NECAP1-212ENST00000638787 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
NECAP1-212ENST00000638787 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
NECAP1-212ENST00000638787 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
NECAP1-212ENST00000638787 GOLGA3Q08378 1498 aa14.61□□□□□ -0.07
NECAP1-212ENST00000638787 DISP1Q96F81 1524 aa14.61□□□□□ -0.07
NECAP1-212ENST00000638787 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
NECAP1-212ENST00000638787 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
NECAP1-212ENST00000638787 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
NECAP1-212ENST00000638787 UBTFP17480 764 aaKnown RBP14.55□□□□□ -0.08
NECAP1-212ENST00000638787 PTPRGP23470 1445 aa14.54□□□□□ -0.08
NECAP1-212ENST00000638787 TTBK1Q5TCY1 1321 aaPredicted RBP14.52□□□□□ -0.09
NECAP1-212ENST00000638787 SAMD9Q5K651 1589 aa14.51□□□□□ -0.09
NECAP1-212ENST00000638787 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
NECAP1-212ENST00000638787 ADCY10Q96PN6 1610 aa14.49□□□□□ -0.09
NECAP1-212ENST00000638787 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
NECAP1-212ENST00000638787 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.09
NECAP1-212ENST00000638787 UACAQ9BZF9 1416 aa14.45□□□□□ -0.1
NECAP1-212ENST00000638787 UHRF1BP1LA0JNW5 1464 aa14.44□□□□□ -0.1
NECAP1-212ENST00000638787 ABCC2Q92887 1545 aa14.44□□□□□ -0.1
NECAP1-212ENST00000638787 FHOD3Q2V2M9 1422 aa14.43□□□□□ -0.1
NECAP1-212ENST00000638787 PLB1Q6P1J6 1458 aa14.42□□□□□ -0.1
NECAP1-212ENST00000638787 ABCA8O94911 1581 aa14.41□□□□□ -0.1
NECAP1-212ENST00000638787 NPM1P06748 294 aaKnown RBP eCLIP14.4□□□□□ -0.1
NECAP1-212ENST00000638787 ARHGAP35Q9NRY4 1499 aa14.4□□□□□ -0.1
NECAP1-212ENST00000638787 MAPKBP1O60336 1514 aa14.37□□□□□ -0.11
NECAP1-212ENST00000638787 KDM5BQ9UGL1 1544 aa14.36□□□□□ -0.11
NECAP1-212ENST00000638787 LOC105371045A0A1W2PR82 267 aa14.35□□□□□ -0.11
NECAP1-212ENST00000638787 ZCCHC11Q5TAX3 1644 aaKnown RBP14.35□□□□□ -0.11
NECAP1-212ENST00000638787 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
NECAP1-212ENST00000638787 CLIP1P30622 1438 aa14.35□□□□□ -0.11
NECAP1-212ENST00000638787 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
NECAP1-212ENST00000638787 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
NECAP1-212ENST00000638787 ASXL2Q76L83 1435 aa14.31□□□□□ -0.12
NECAP1-212ENST00000638787 CEP162Q5TB80 1403 aa14.31□□□□□ -0.12
NECAP1-212ENST00000638787 NUP153P49790 1475 aaKnown RBP14.3□□□□□ -0.12
NECAP1-212ENST00000638787 ABCC10Q5T3U5 1492 aa14.29□□□□□ -0.12
NECAP1-212ENST00000638787 KIF13AQ9H1H9 1805 aa14.29□□□□□ -0.12
NECAP1-212ENST00000638787 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
NECAP1-212ENST00000638787 ATP10BO94823 1461 aa14.28□□□□□ -0.12
NECAP1-212ENST00000638787 DIP2BQ9P265 1576 aa14.28□□□□□ -0.12
NECAP1-212ENST00000638787 HECW1Q76N89 1606 aa14.26□□□□□ -0.13
NECAP1-212ENST00000638787 WDR7Q9Y4E6 1490 aa14.25□□□□□ -0.13
NECAP1-212ENST00000638787 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
NECAP1-212ENST00000638787 PCF11O94913 1555 aaKnown RBP14.24□□□□□ -0.13
NECAP1-212ENST00000638787 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
NECAP1-212ENST00000638787 CASKIN1Q8WXD9 1431 aa14.22□□□□□ -0.13
NECAP1-212ENST00000638787 CDK13Q14004 1512 aaKnown RBP14.22□□□□□ -0.13
NECAP1-212ENST00000638787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
NECAP1-212ENST00000638787 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
NECAP1-212ENST00000638787 ATP1B4Q9UN42 357 aaPredicted RBP14.22□□□□□ -0.13
NECAP1-212ENST00000638787 GLI2P10070 1586 aa14.21□□□□□ -0.13
NECAP1-212ENST00000638787 FYCO1Q9BQS8 1478 aa14.2□□□□□ -0.14
NECAP1-212ENST00000638787 LRRIQ1Q96JM4 1722 aa14.19□□□□□ -0.14
NECAP1-212ENST00000638787 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
NECAP1-212ENST00000638787 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
NECAP1-212ENST00000638787 PLEKHD1A6NEE1 506 aa14.16□□□□□ -0.14
NECAP1-212ENST00000638787 CCDC18Q5T9S5 1454 aa14.15□□□□□ -0.14
NECAP1-212ENST00000638787 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.14
NECAP1-212ENST00000638787 CFAP43Q8NDM7 1665 aa14.14□□□□□ -0.15
NECAP1-212ENST00000638787 VPS8Q8N3P4 1428 aa14.13□□□□□ -0.15
NECAP1-212ENST00000638787 CDK11AQ9UQ88 783 aaPredicted RBP14.13□□□□□ -0.15
NECAP1-212ENST00000638787 PPRC1Q5VV67 1664 aaKnown RBP14.13□□□□□ -0.15
NECAP1-212ENST00000638787 ABCA9Q8IUA7 1624 aa14.12□□□□□ -0.15
NECAP1-212ENST00000638787 CD109Q6YHK3 1445 aa14.1□□□□□ -0.15
NECAP1-212ENST00000638787 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
NECAP1-212ENST00000638787 MAGI3Q5TCQ9 1506 aa14.08□□□□□ -0.16
NECAP1-212ENST00000638787 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.08□□□□□ -0.16
NECAP1-212ENST00000638787 TEX14Q8IWB6 1497 aa14.08□□□□□ -0.16
NECAP1-212ENST00000638787 TTC37Q6PGP7 1564 aa14.07□□□□□ -0.16
NECAP1-212ENST00000638787 KIF14Q15058 1648 aa14.06□□□□□ -0.16
NECAP1-212ENST00000638787 TIAM1Q13009 1591 aa14.03□□□□□ -0.16
NECAP1-212ENST00000638787 KDM6BO15054 1643 aa14.02□□□□□ -0.17
NECAP1-212ENST00000638787 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.17
NECAP1-212ENST00000638787 EHBP1L1Q8N3D4 1523 aa14□□□□□ -0.17
NECAP1-212ENST00000638787 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
NECAP1-212ENST00000638787 MAP3K1Q13233 1512 aa13.99□□□□□ -0.17
NECAP1-212ENST00000638787 PLCH2O75038 1416 aa13.99□□□□□ -0.17
NECAP1-212ENST00000638787 NEO1Q92859 1461 aa13.99□□□□□ -0.17
NECAP1-212ENST00000638787 COL17A1Q9UMD9 1497 aaPredicted RBP13.97□□□□□ -0.17
NECAP1-212ENST00000638787 CFAP74Q9C0B2 1584 aa13.97□□□□□ -0.17
NECAP1-212ENST00000638787 FANCAO15360 1455 aa13.97□□□□□ -0.17
NECAP1-212ENST00000638787 ARAP3Q8WWN8 1544 aa13.97□□□□□ -0.17
NECAP1-212ENST00000638787 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
NECAP1-212ENST00000638787 LRRC9Q6ZRR7 1453 aa13.95□□□□□ -0.18
NECAP1-212ENST00000638787 PREX2Q70Z35 1606 aa13.95□□□□□ -0.18
NECAP1-212ENST00000638787 CDC42BPAQ5VT25 1732 aa13.95□□□□□ -0.18
NECAP1-212ENST00000638787 CDC42BPBQ9Y5S2 1711 aa13.94□□□□□ -0.18
NECAP1-212ENST00000638787 APLP2Q06481 763 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms