RNA–Protein interactions for RNA: ENST00000638395.1

KCNC1-206, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-206ENST00000638395 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
KCNC1-206ENST00000638395 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
KCNC1-206ENST00000638395 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
KCNC1-206ENST00000638395 CTTNBP2Q8WZ74 1663 aa17.93■□□□□ 0.46
KCNC1-206ENST00000638395 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
KCNC1-206ENST00000638395 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
KCNC1-206ENST00000638395 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
KCNC1-206ENST00000638395 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
KCNC1-206ENST00000638395 GOLGA3Q08378 1498 aa17.85■□□□□ 0.45
KCNC1-206ENST00000638395 NUP160Q12769 1436 aa17.85■□□□□ 0.45
KCNC1-206ENST00000638395 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
KCNC1-206ENST00000638395 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
KCNC1-206ENST00000638395 FBLN2P98095 1184 aa17.78■□□□□ 0.44
KCNC1-206ENST00000638395 SHROOM2Q13796 1616 aa17.78■□□□□ 0.44
KCNC1-206ENST00000638395 IQGAP2Q13576 1575 aa17.78■□□□□ 0.44
KCNC1-206ENST00000638395 KIAA0586Q9BVV6 1533 aa17.76■□□□□ 0.43
KCNC1-206ENST00000638395 SLC24A1O60721 1099 aa17.75■□□□□ 0.43
KCNC1-206ENST00000638395 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
KCNC1-206ENST00000638395 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
KCNC1-206ENST00000638395 UGGT2Q9NYU1 1516 aa17.67■□□□□ 0.42
KCNC1-206ENST00000638395 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
KCNC1-206ENST00000638395 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
KCNC1-206ENST00000638395 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
KCNC1-206ENST00000638395 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
KCNC1-206ENST00000638395 EFCAB5A4FU69 1503 aa17.63■□□□□ 0.41
KCNC1-206ENST00000638395 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
KCNC1-206ENST00000638395 UBTFP17480 764 aaKnown RBP17.6■□□□□ 0.41
KCNC1-206ENST00000638395 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
KCNC1-206ENST00000638395 DISP1Q96F81 1524 aa17.56■□□□□ 0.4
KCNC1-206ENST00000638395 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
KCNC1-206ENST00000638395 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
KCNC1-206ENST00000638395 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
KCNC1-206ENST00000638395 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
KCNC1-206ENST00000638395 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
KCNC1-206ENST00000638395 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
KCNC1-206ENST00000638395 PRG4Q92954 1404 aaPredicted RBP17.54■□□□□ 0.4
KCNC1-206ENST00000638395 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
KCNC1-206ENST00000638395 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
KCNC1-206ENST00000638395 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
KCNC1-206ENST00000638395 CEP162Q5TB80 1403 aa17.5■□□□□ 0.39
KCNC1-206ENST00000638395 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
KCNC1-206ENST00000638395 CLIP1P30622 1438 aa17.47■□□□□ 0.39
KCNC1-206ENST00000638395 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
KCNC1-206ENST00000638395 ARAP1Q96P48 1450 aa17.41■□□□□ 0.38
KCNC1-206ENST00000638395 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
KCNC1-206ENST00000638395 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.37
KCNC1-206ENST00000638395 RAPGEF6Q8TEU7 1601 aa17.38■□□□□ 0.37
KCNC1-206ENST00000638395 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
KCNC1-206ENST00000638395 ABCA8O94911 1581 aa17.37■□□□□ 0.37
KCNC1-206ENST00000638395 PTPRGP23470 1445 aa17.36■□□□□ 0.37
KCNC1-206ENST00000638395 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
KCNC1-206ENST00000638395 PCF11O94913 1555 aaKnown RBP17.34■□□□□ 0.37
KCNC1-206ENST00000638395 HECW1Q76N89 1606 aa17.34■□□□□ 0.37
KCNC1-206ENST00000638395 ADCY10Q96PN6 1610 aa17.33■□□□□ 0.37
KCNC1-206ENST00000638395 ABCC2Q92887 1545 aa17.33■□□□□ 0.37
KCNC1-206ENST00000638395 UHRF1BP1LA0JNW5 1464 aa17.33■□□□□ 0.37
KCNC1-206ENST00000638395 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
KCNC1-206ENST00000638395 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
KCNC1-206ENST00000638395 FYCO1Q9BQS8 1478 aa17.3■□□□□ 0.36
KCNC1-206ENST00000638395 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
KCNC1-206ENST00000638395 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
KCNC1-206ENST00000638395 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
KCNC1-206ENST00000638395 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.35
KCNC1-206ENST00000638395 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
KCNC1-206ENST00000638395 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
KCNC1-206ENST00000638395 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
KCNC1-206ENST00000638395 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
KCNC1-206ENST00000638395 KDM5BQ9UGL1 1544 aa17.22■□□□□ 0.35
KCNC1-206ENST00000638395 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
KCNC1-206ENST00000638395 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
KCNC1-206ENST00000638395 EPRSP07814 1512 aaKnown RBP17.19■□□□□ 0.34
KCNC1-206ENST00000638395 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
KCNC1-206ENST00000638395 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
KCNC1-206ENST00000638395 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
KCNC1-206ENST00000638395 MAP3K1Q13233 1512 aa17.17■□□□□ 0.34
KCNC1-206ENST00000638395 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
KCNC1-206ENST00000638395 TIAM1Q13009 1591 aa17.15■□□□□ 0.34
KCNC1-206ENST00000638395 ATP10BO94823 1461 aa17.14■□□□□ 0.33
KCNC1-206ENST00000638395 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
KCNC1-206ENST00000638395 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
KCNC1-206ENST00000638395 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
KCNC1-206ENST00000638395 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
KCNC1-206ENST00000638395 KIF13AQ9H1H9 1805 aa17.05■□□□□ 0.32
KCNC1-206ENST00000638395 KIF14Q15058 1648 aa17.05■□□□□ 0.32
KCNC1-206ENST00000638395 MAGI3Q5TCQ9 1506 aa17.05■□□□□ 0.32
KCNC1-206ENST00000638395 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
KCNC1-206ENST00000638395 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
KCNC1-206ENST00000638395 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
KCNC1-206ENST00000638395 DIP2BQ9P265 1576 aa17.02■□□□□ 0.32
KCNC1-206ENST00000638395 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.31
KCNC1-206ENST00000638395 GLI2P10070 1586 aa17.02■□□□□ 0.31
KCNC1-206ENST00000638395 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
KCNC1-206ENST00000638395 ABCA9Q8IUA7 1624 aa17.01■□□□□ 0.31
KCNC1-206ENST00000638395 CDK11AQ9UQ88 783 aaPredicted RBP17.01■□□□□ 0.31
KCNC1-206ENST00000638395 MYO5CQ9NQX4 1742 aa16.99■□□□□ 0.31
KCNC1-206ENST00000638395 APLP2Q06481 763 aa16.99■□□□□ 0.31
KCNC1-206ENST00000638395 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
KCNC1-206ENST00000638395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
KCNC1-206ENST00000638395 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
KCNC1-206ENST00000638395 MAP3K4Q9Y6R4 1608 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms