RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ARAP1Q96P48 1450 aa7.15□□□□□ -1.26
GABRA1-220ENST00000638159 PTPRGP23470 1445 aa7.14□□□□□ -1.27
GABRA1-220ENST00000638159 CDK11AQ9UQ88 783 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-220ENST00000638159 A0A0G2JS52 829 aa7.13□□□□□ -1.27
GABRA1-220ENST00000638159 MYT1Q01538 1121 aa7.13□□□□□ -1.27
GABRA1-220ENST00000638159 TEX14Q8IWB6 1497 aa7.13□□□□□ -1.27
GABRA1-220ENST00000638159 GRIN2BQ13224 1484 aa7.12□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2BA6NNL0 878 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2EB1AL46 878 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2DQ5VT03 806 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 NUTM2AQ8IVF1 878 aaPredicted RBP7.1□□□□□ -1.27
GABRA1-220ENST00000638159 WDR62O43379 1518 aa7.1□□□□□ -1.27
GABRA1-220ENST00000638159 PLEKHD1A6NEE1 506 aa7.1□□□□□ -1.27
GABRA1-220ENST00000638159 PRG4Q92954 1404 aaPredicted RBP7.09□□□□□ -1.27
GABRA1-220ENST00000638159 ZRANB1Q9UGI0 708 aa7.09□□□□□ -1.27
GABRA1-220ENST00000638159 ERCC6L2Q5T890 1561 aa7.09□□□□□ -1.27
GABRA1-220ENST00000638159 SNAPC4Q5SXM2 1469 aa7.09□□□□□ -1.28
GABRA1-220ENST00000638159 HAP1P54257 671 aaPredicted RBP7.08□□□□□ -1.28
GABRA1-220ENST00000638159 KDM6BO15054 1643 aa7.07□□□□□ -1.28
GABRA1-220ENST00000638159 MROH2BQ7Z745 1585 aa7.07□□□□□ -1.28
GABRA1-220ENST00000638159 ILDR2Q71H61 639 aa7.06□□□□□ -1.28
GABRA1-220ENST00000638159 ZNF608Q9ULD9 1512 aaPredicted RBP7.06□□□□□ -1.28
GABRA1-220ENST00000638159 ADGRL1O94910 1474 aa7.06□□□□□ -1.28
GABRA1-220ENST00000638159 THOC2Q8NI27 1593 aaKnown RBP7.05□□□□□ -1.28
GABRA1-220ENST00000638159 SMARCA4P51532 1647 aa7.05□□□□□ -1.28
GABRA1-220ENST00000638159 MAGI1Q96QZ7 1491 aaPredicted RBP7.05□□□□□ -1.28
GABRA1-220ENST00000638159 PPP1R1BQ9UD71 204 aaPredicted RBP7.04□□□□□ -1.28
GABRA1-220ENST00000638159 PLB1Q6P1J6 1458 aa7.03□□□□□ -1.28
GABRA1-220ENST00000638159 PPP6R1Q9UPN7 881 aa7.03□□□□□ -1.28
GABRA1-220ENST00000638159 TRIM52Q96A61 297 aa7.02□□□□□ -1.29
GABRA1-220ENST00000638159 CFTRP13569 1480 aa7.01□□□□□ -1.29
GABRA1-220ENST00000638159 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
GABRA1-220ENST00000638159 TOP2BQ02880 1626 aa7.01□□□□□ -1.29
GABRA1-220ENST00000638159 RBM33Q96EV2 1170 aaKnown RBP7□□□□□ -1.29
GABRA1-220ENST00000638159 PPP1R15AO75807 674 aaPredicted RBP6.99□□□□□ -1.29
GABRA1-220ENST00000638159 TOPBP1Q92547 1522 aa6.99□□□□□ -1.29
GABRA1-220ENST00000638159 P3H3Q8IVL6 736 aa6.98□□□□□ -1.29
GABRA1-220ENST00000638159 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
GABRA1-220ENST00000638159 CCDC9Q9Y3X0 531 aaKnown RBP6.98□□□□□ -1.29
GABRA1-220ENST00000638159 EID1Q9Y6B2 187 aa6.98□□□□□ -1.29
GABRA1-220ENST00000638159 URB2Q14146 1524 aaKnown RBP6.97□□□□□ -1.29
GABRA1-220ENST00000638159 ADRA2BP18089 450 aa6.97□□□□□ -1.29
GABRA1-220ENST00000638159 NGLY1Q96IV0 654 aa6.97□□□□□ -1.29
GABRA1-220ENST00000638159 TNIKQ9UKE5 1360 aa6.96□□□□□ -1.29
GABRA1-220ENST00000638159 CD109Q6YHK3 1445 aa6.96□□□□□ -1.29
GABRA1-220ENST00000638159 EFCAB2Q5VUJ9 269 aa6.96□□□□□ -1.29
GABRA1-220ENST00000638159 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.3
GABRA1-220ENST00000638159 UHRF1BP1Q6BDS2 1440 aa6.96□□□□□ -1.3
GABRA1-220ENST00000638159 RAD54L2Q9Y4B4 1467 aa6.96□□□□□ -1.3
GABRA1-220ENST00000638159 ABCC10Q5T3U5 1492 aa6.95□□□□□ -1.3
GABRA1-220ENST00000638159 ZNF772Q68DY9 489 aaPredicted RBP6.95□□□□□ -1.3
GABRA1-220ENST00000638159 FHAD1B1AJZ9 1412 aa6.95□□□□□ -1.3
GABRA1-220ENST00000638159 HDGFP51858 240 aaKnown RBP6.94□□□□□ -1.3
GABRA1-220ENST00000638159 ANKLE2Q86XL3 938 aa6.94□□□□□ -1.3
GABRA1-220ENST00000638159 AKNAQ7Z591 1439 aa6.94□□□□□ -1.3
GABRA1-220ENST00000638159 RAPGEF3O95398 923 aa6.93□□□□□ -1.3
GABRA1-220ENST00000638159 PHLDB1Q86UU1 1377 aa6.93□□□□□ -1.3
GABRA1-220ENST00000638159 PKD2Q13563 968 aa6.93□□□□□ -1.3
GABRA1-220ENST00000638159 APLP2Q06481 763 aa6.92□□□□□ -1.3
GABRA1-220ENST00000638159 GGT6Q6P531 493 aa6.92□□□□□ -1.3
GABRA1-220ENST00000638159 SENP3-EIF4A1A0A087X0R7 540 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 UBTFP17480 764 aaKnown RBP6.91□□□□□ -1.3
GABRA1-220ENST00000638159 HECW2Q9P2P5 1572 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 HSPA1LP34931 641 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 RXRBP28702 533 aa6.91□□□□□ -1.3
GABRA1-220ENST00000638159 THEMISQ8N1K5 641 aaPredicted RBP6.9□□□□□ -1.3
GABRA1-220ENST00000638159 CEBPAP49715 358 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-220ENST00000638159 POLA1P09884 1462 aaPredicted RBP6.89□□□□□ -1.31
GABRA1-220ENST00000638159 YEATS2Q9ULM3 1422 aa6.89□□□□□ -1.31
GABRA1-220ENST00000638159 FGD5Q6ZNL6 1462 aa6.89□□□□□ -1.31
GABRA1-220ENST00000638159 DNMBPQ6XZF7 1577 aa6.88□□□□□ -1.31
GABRA1-220ENST00000638159 ASXL2Q76L83 1435 aa6.88□□□□□ -1.31
GABRA1-220ENST00000638159 SPATA31D1Q6ZQQ2 1576 aa6.88□□□□□ -1.31
GABRA1-220ENST00000638159 CHGAP10645 457 aaKnown RBP6.88□□□□□ -1.31
GABRA1-220ENST00000638159 ATF3P18847 181 aa6.87□□□□□ -1.31
GABRA1-220ENST00000638159 PROSER2Q86WR7 435 aaPredicted RBP6.87□□□□□ -1.31
GABRA1-220ENST00000638159 YY1P25490 414 aa6.86□□□□□ -1.31
GABRA1-220ENST00000638159 GRIN2AQ12879 1464 aa6.86□□□□□ -1.31
GABRA1-220ENST00000638159 KIF27Q86VH2 1401 aa6.86□□□□□ -1.31
GABRA1-220ENST00000638159 EIF4G3O43432 1585 aaKnown RBP6.85□□□□□ -1.31
GABRA1-220ENST00000638159 FANCAO15360 1455 aa6.85□□□□□ -1.31
GABRA1-220ENST00000638159 UACAQ9BZF9 1416 aa6.84□□□□□ -1.31
GABRA1-220ENST00000638159 TOP2AP11388 1531 aaKnown RBP6.84□□□□□ -1.31
GABRA1-220ENST00000638159 KLHL34Q8N239 644 aa6.84□□□□□ -1.31
GABRA1-220ENST00000638159 BIVM-ERCC5R4GMW8 1640 aa6.83□□□□□ -1.32
GABRA1-220ENST00000638159 PELP1Q8IZL8 1130 aaKnown RBP6.83□□□□□ -1.32
GABRA1-220ENST00000638159 BAG6P46379 1132 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 PLEKHG5O94827 1062 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 NBPF8Q3BBV2 869 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 NBPF14Q5TI25 921 aa6.82□□□□□ -1.32
GABRA1-220ENST00000638159 PTPRKQ15262 1439 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 NCKAP5LQ9HCH0 1330 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 CARMIL1Q5VZK9 1371 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 LMOD2Q6P5Q4 547 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 WDR97A6NE52 1622 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 TSPY4P0CV99 314 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 TSPY10P0CW01 314 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 KCNA4P22459 653 aa6.81□□□□□ -1.32
GABRA1-220ENST00000638159 PTPRMP28827 1452 aa6.8□□□□□ -1.32
GABRA1-220ENST00000638159 DENND4BO75064 1496 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms