RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
CLCN2-220ENST00000637538 FBLN2P98095 1184 aa26.67■■□□□ 1.86
CLCN2-220ENST00000637538 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.85
CLCN2-220ENST00000637538 ARHGAP35Q9NRY4 1499 aa26.62■■□□□ 1.85
CLCN2-220ENST00000637538 NUP160Q12769 1436 aa26.6■■□□□ 1.85
CLCN2-220ENST00000637538 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
CLCN2-220ENST00000637538 CEP170Q5SW79 1584 aa26.59■■□□□ 1.85
CLCN2-220ENST00000637538 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
CLCN2-220ENST00000637538 KIAA0586Q9BVV6 1533 aa26.58■■□□□ 1.84
CLCN2-220ENST00000637538 CHD1O14646 1710 aa26.57■■□□□ 1.84
CLCN2-220ENST00000637538 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
CLCN2-220ENST00000637538 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
CLCN2-220ENST00000637538 SAMD9Q5K651 1589 aa26.52■■□□□ 1.84
CLCN2-220ENST00000637538 VPS8Q8N3P4 1428 aa26.52■■□□□ 1.84
CLCN2-220ENST00000637538 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
CLCN2-220ENST00000637538 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.81
CLCN2-220ENST00000637538 FHOD3Q2V2M9 1422 aa26.38■■□□□ 1.81
CLCN2-220ENST00000637538 DISP1Q96F81 1524 aa26.36■■□□□ 1.81
CLCN2-220ENST00000637538 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
CLCN2-220ENST00000637538 KIAA0556O60303 1618 aa26.33■■□□□ 1.81
CLCN2-220ENST00000637538 P3H3Q8IVL6 736 aa26.32■■□□□ 1.8
CLCN2-220ENST00000637538 SHROOM2Q13796 1616 aa26.29■■□□□ 1.8
CLCN2-220ENST00000637538 RIMBP3CA6NJZ7 1639 aa26.29■■□□□ 1.8
CLCN2-220ENST00000637538 RIMBP3BA6NNM3 1639 aa26.29■■□□□ 1.8
CLCN2-220ENST00000637538 RIMBP3Q9UFD9 1639 aa26.29■■□□□ 1.8
CLCN2-220ENST00000637538 JPH4Q96JJ6 628 aa26.28■■□□□ 1.8
CLCN2-220ENST00000637538 FMN1Q68DA7 1419 aa26.27■■□□□ 1.8
CLCN2-220ENST00000637538 PCF11O94913 1555 aaKnown RBP26.25■■□□□ 1.79
CLCN2-220ENST00000637538 CASKIN1Q8WXD9 1431 aa26.22■■□□□ 1.79
CLCN2-220ENST00000637538 FYCO1Q9BQS8 1478 aa26.21■■□□□ 1.79
CLCN2-220ENST00000637538 CARMIL2Q6F5E8 1435 aa26.2■■□□□ 1.78
CLCN2-220ENST00000637538 MAP3K1Q13233 1512 aa26.16■■□□□ 1.78
CLCN2-220ENST00000637538 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
CLCN2-220ENST00000637538 CYB5RLQ6IPT4 315 aa26.14■■□□□ 1.78
CLCN2-220ENST00000637538 TIAM1Q13009 1591 aa26.1■■□□□ 1.77
CLCN2-220ENST00000637538 CFAP43Q8NDM7 1665 aa26.09■■□□□ 1.77
CLCN2-220ENST00000637538 APLP2Q06481 763 aa26.08■■□□□ 1.77
CLCN2-220ENST00000637538 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
CLCN2-220ENST00000637538 LRRIQ1Q96JM4 1722 aa26.07■■□□□ 1.76
CLCN2-220ENST00000637538 ERCC6L2Q5T890 1561 aa26.06■■□□□ 1.76
CLCN2-220ENST00000637538 HECW1Q76N89 1606 aa26.05■■□□□ 1.76
CLCN2-220ENST00000637538 RAPGEF6Q8TEU7 1601 aa26.02■■□□□ 1.76
CLCN2-220ENST00000637538 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
CLCN2-220ENST00000637538 ABCA8O94911 1581 aa25.99■■□□□ 1.75
CLCN2-220ENST00000637538 PLB1Q6P1J6 1458 aa25.97■■□□□ 1.75
CLCN2-220ENST00000637538 NUP153P49790 1475 aaKnown RBP25.97■■□□□ 1.75
CLCN2-220ENST00000637538 CCDC18Q5T9S5 1454 aa25.97■■□□□ 1.75
CLCN2-220ENST00000637538 LRRC9Q6ZRR7 1453 aa25.97■■□□□ 1.75
CLCN2-220ENST00000637538 PTPRGP23470 1445 aa25.97■■□□□ 1.75
CLCN2-220ENST00000637538 EPRSP07814 1512 aaKnown RBP25.95■■□□□ 1.75
CLCN2-220ENST00000637538 TRIM26Q12899 539 aaPredicted RBP25.94■■□□□ 1.74
CLCN2-220ENST00000637538 ATP1B4Q9UN42 357 aaPredicted RBP25.93■■□□□ 1.74
CLCN2-220ENST00000637538 TTBK1Q5TCY1 1321 aaPredicted RBP25.91■■□□□ 1.74
CLCN2-220ENST00000637538 CDK13Q14004 1512 aaKnown RBP25.88■■□□□ 1.73
CLCN2-220ENST00000637538 MAGI3Q5TCQ9 1506 aa25.84■■□□□ 1.73
CLCN2-220ENST00000637538 UACAQ9BZF9 1416 aa25.84■■□□□ 1.73
CLCN2-220ENST00000637538 EHBP1L1Q8N3D4 1523 aa25.81■■□□□ 1.72
CLCN2-220ENST00000637538 PCGF6Q9BYE7 350 aa25.8■■□□□ 1.72
CLCN2-220ENST00000637538 ABCC2Q92887 1545 aa25.8■■□□□ 1.72
CLCN2-220ENST00000637538 UHRF1BP1LA0JNW5 1464 aa25.79■■□□□ 1.72
CLCN2-220ENST00000637538 ATP10BO94823 1461 aa25.77■■□□□ 1.72
CLCN2-220ENST00000637538 MTUS2Q5JR59 1369 aa25.77■■□□□ 1.72
CLCN2-220ENST00000637538 ARID3CA6NKF2 412 aa25.73■■□□□ 1.71
CLCN2-220ENST00000637538 SUPT6HQ7KZ85 1726 aaKnown RBP25.71■■□□□ 1.71
CLCN2-220ENST00000637538 PHLDB1Q86UU1 1377 aa25.7■■□□□ 1.7
CLCN2-220ENST00000637538 RRBP1Q9P2E9 1410 aaKnown RBP25.7■■□□□ 1.7
CLCN2-220ENST00000637538 NCOA2Q15596 1464 aa25.68■■□□□ 1.7
CLCN2-220ENST00000637538 TROQ12816 1431 aaPredicted RBP25.67■■□□□ 1.7
CLCN2-220ENST00000637538 ADCY10Q96PN6 1610 aa25.67■■□□□ 1.7
CLCN2-220ENST00000637538 KDM5BQ9UGL1 1544 aa25.66■■□□□ 1.7
CLCN2-220ENST00000637538 CDK11AQ9UQ88 783 aaPredicted RBP25.66■■□□□ 1.7
CLCN2-220ENST00000637538 ZCCHC11Q5TAX3 1644 aaKnown RBP25.62■■□□□ 1.69
CLCN2-220ENST00000637538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.61■■□□□ 1.69
CLCN2-220ENST00000637538 HNRNPUL2Q1KMD3 747 aaKnown RBP25.61■■□□□ 1.69
CLCN2-220ENST00000637538 NPM1P06748 294 aaKnown RBP eCLIP25.58■■□□□ 1.69
CLCN2-220ENST00000637538 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
CLCN2-220ENST00000637538 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
CLCN2-220ENST00000637538 MYOM3Q5VTT5 1437 aa25.57■■□□□ 1.68
CLCN2-220ENST00000637538 KIF14Q15058 1648 aa25.56■■□□□ 1.68
CLCN2-220ENST00000637538 PLEKHD1A6NEE1 506 aa25.55■■□□□ 1.68
CLCN2-220ENST00000637538 FGD6Q6ZV73 1430 aa25.55■■□□□ 1.68
CLCN2-220ENST00000637538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.51■■□□□ 1.67
CLCN2-220ENST00000637538 ABCC10Q5T3U5 1492 aa25.5■■□□□ 1.67
CLCN2-220ENST00000637538 MIA2Q96PC5 1412 aa25.47■■□□□ 1.67
CLCN2-220ENST00000637538 TCOF1Q13428 1488 aaKnown RBP25.45■■□□□ 1.67
CLCN2-220ENST00000637538 MAPKBP1O60336 1514 aa25.44■■□□□ 1.66
CLCN2-220ENST00000637538 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
CLCN2-220ENST00000637538 GPATCH8Q9UKJ3 1502 aaKnown RBP25.43■■□□□ 1.66
CLCN2-220ENST00000637538 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
CLCN2-220ENST00000637538 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
CLCN2-220ENST00000637538 WDR7Q9Y4E6 1490 aa25.39■■□□□ 1.65
CLCN2-220ENST00000637538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.39■■□□□ 1.65
CLCN2-220ENST00000637538 TTC37Q6PGP7 1564 aa25.37■■□□□ 1.65
CLCN2-220ENST00000637538 ASXL2Q76L83 1435 aa25.35■■□□□ 1.65
CLCN2-220ENST00000637538 FAM50AQ14320 339 aaKnown RBP25.34■■□□□ 1.65
CLCN2-220ENST00000637538 PREX2Q70Z35 1606 aa25.33■■□□□ 1.65
CLCN2-220ENST00000637538 FAM69CQ0P6D2 419 aa25.31■■□□□ 1.64
CLCN2-220ENST00000637538 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
CLCN2-220ENST00000637538 MYO5CQ9NQX4 1742 aa25.27■■□□□ 1.64
CLCN2-220ENST00000637538 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms