RNA–Protein interactions for RNA: ENST00000637391.1

ARHGEF9-231, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-231	ENST00000637391	JPH4	Q96JJ6	628 aa		10.82	□□□□□ -0.68
ARHGEF9-231	ENST00000637391	PRG4	Q92954	1404 aa	Predicted RBP	10.82	□□□□□ -0.68
ARHGEF9-231	ENST00000637391	SHROOM2	Q13796	1616 aa		10.8	□□□□□ -0.68
ARHGEF9-231	ENST00000637391	DISP3	Q9P2K9	1392 aa		10.77	□□□□□ -0.69
ARHGEF9-231	ENST00000637391	CUX1	P39880	1505 aa		10.75	□□□□□ -0.69
ARHGEF9-231	ENST00000637391	PBRM1	Q86U86	1689 aa		10.74	□□□□□ -0.69
ARHGEF9-231	ENST00000637391	ABCA10	Q8WWZ4	1543 aa		10.74	□□□□□ -0.69
ARHGEF9-231	ENST00000637391	FHAD1	B1AJZ9	1412 aa		10.72	□□□□□ -0.69
ARHGEF9-231	ENST00000637391	TSPOAP1	O95153	1857 aa		10.71	□□□□□ -0.69
ARHGEF9-231	ENST00000637391	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.71	□□□□□ -0.69
ARHGEF9-231	ENST00000637391	ABCA5	Q8WWZ7	1642 aa		10.7	□□□□□ -0.7
ARHGEF9-231	ENST00000637391	ADCY10	Q96PN6	1610 aa		10.68	□□□□□ -0.7
ARHGEF9-231	ENST00000637391	ADAMTS12	P58397	1594 aa		10.67	□□□□□ -0.7
ARHGEF9-231	ENST00000637391	TOP2B	Q02880	1626 aa		10.66	□□□□□ -0.7
ARHGEF9-231	ENST00000637391	CERK	Q8TCT0	537 aa		10.65	□□□□□ -0.7
ARHGEF9-231	ENST00000637391	PLB1	Q6P1J6	1458 aa		10.63	□□□□□ -0.71
ARHGEF9-231	ENST00000637391	GLI2	P10070	1586 aa		10.63	□□□□□ -0.71
ARHGEF9-231	ENST00000637391	ASXL2	Q76L83	1435 aa		10.61	□□□□□ -0.71
ARHGEF9-231	ENST00000637391	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.6	□□□□□ -0.71
ARHGEF9-231	ENST00000637391	PPRC1	Q5VV67	1664 aa	Known RBP	10.6	□□□□□ -0.71
ARHGEF9-231	ENST00000637391	PTPRG	P23470	1445 aa		10.59	□□□□□ -0.71
ARHGEF9-231	ENST00000637391	TEX14	Q8IWB6	1497 aa		10.59	□□□□□ -0.71
ARHGEF9-231	ENST00000637391	ERICH3	Q5RHP9	1530 aa		10.58	□□□□□ -0.72
ARHGEF9-231	ENST00000637391	ABCC2	Q92887	1545 aa		10.57	□□□□□ -0.72
ARHGEF9-231	ENST00000637391	PTPRM	P28827	1452 aa		10.54	□□□□□ -0.72
ARHGEF9-231	ENST00000637391	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.54	□□□□□ -0.72
ARHGEF9-231	ENST00000637391	EPRS	P07814	1512 aa	Known RBP	10.53	□□□□□ -0.72
ARHGEF9-231	ENST00000637391	RUSC2	Q8N2Y8	1516 aa		10.53	□□□□□ -0.72
ARHGEF9-231	ENST00000637391	KIAA0586	Q9BVV6	1533 aa		10.53	□□□□□ -0.72
ARHGEF9-231	ENST00000637391	PCF11	O94913	1555 aa	Known RBP	10.5	□□□□□ -0.73
ARHGEF9-231	ENST00000637391	TNIK	Q9UKE5	1360 aa		10.5	□□□□□ -0.73
ARHGEF9-231	ENST00000637391	HSPA2	P54652	639 aa		10.49	□□□□□ -0.73
ARHGEF9-231	ENST00000637391	UHRF1BP1L	A0JNW5	1464 aa		10.49	□□□□□ -0.73
ARHGEF9-231	ENST00000637391	SPATA31D1	Q6ZQQ2	1576 aa		10.48	□□□□□ -0.73
ARHGEF9-231	ENST00000637391	MAP3K4	Q9Y6R4	1608 aa		10.48	□□□□□ -0.73
ARHGEF9-231	ENST00000637391	UACA	Q9BZF9	1416 aa		10.46	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	CARMIL2	Q6F5E8	1435 aa		10.45	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	KDM5B	Q9UGL1	1544 aa		10.43	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	CD109	Q6YHK3	1445 aa		10.43	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	MAGI3	Q5TCQ9	1506 aa		10.43	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	ADAMTSL3	P82987	1691 aa		10.42	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	KIF21B	O75037	1637 aa		10.41	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.4	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	DMRT2	Q9Y5R5	561 aa		10.4	□□□□□ -0.74
ARHGEF9-231	ENST00000637391	CUL7	Q14999	1698 aa		10.39	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	KCNH8	Q96L42	1107 aa		10.39	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	IGF1R	P08069	1367 aa		10.38	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	ARAP3	Q8WWN8	1544 aa		10.38	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	WDR7	Q9Y4E6	1490 aa		10.37	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	PHLDB1	Q86UU1	1377 aa		10.35	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	BIVM-ERCC5	R4GMW8	1640 aa		10.34	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	RAPGEF3	O95398	923 aa		10.34	□□□□□ -0.75
ARHGEF9-231	ENST00000637391	PLPPR3	Q6T4P5	718 aa		10.33	□□□□□ -0.76
ARHGEF9-231	ENST00000637391	MADD	Q8WXG6	1647 aa		10.32	□□□□□ -0.76
ARHGEF9-231	ENST00000637391	YEATS2	Q9ULM3	1422 aa		10.32	□□□□□ -0.76
ARHGEF9-231	ENST00000637391	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.31	□□□□□ -0.76
ARHGEF9-231	ENST00000637391	BCORL1	Q5H9F3	1711 aa		10.3	□□□□□ -0.76
ARHGEF9-231	ENST00000637391	DISP1	Q96F81	1524 aa		10.29	□□□□□ -0.76
ARHGEF9-231	ENST00000637391	CFAP43	Q8NDM7	1665 aa		10.29	□□□□□ -0.76
ARHGEF9-231	ENST00000637391	CARMIL1	Q5VZK9	1371 aa		10.26	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	POGZ	Q7Z3K3	1410 aa		10.24	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	KIF27	Q86VH2	1401 aa		10.24	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	IQSEC2	Q5JU85	1478 aa		10.24	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	RIMS1	Q86UR5	1692 aa	Known RBP	10.24	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	PTPRT	O14522	1441 aa		10.24	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	IQGAP2	Q13576	1575 aa		10.23	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	UBAP1L	F5GYI3	381 aa		10.21	□□□□□ -0.77
ARHGEF9-231	ENST00000637391	NEO1	Q92859	1461 aa		10.21	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	MLEC	Q14165	292 aa		10.2	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	LTBP4	Q8N2S1	1624 aa		10.2	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	UGGT2	Q9NYU1	1516 aa		10.19	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	CEBPA	P49715	358 aa	Predicted RBP	10.18	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	FANCA	O15360	1455 aa		10.17	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	AKNA	Q7Z591	1439 aa		10.16	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	PHF23	Q9BUL5	403 aa	Predicted RBP	10.16	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	STRC	Q7RTU9	1775 aa		10.16	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	HSPA1L	P34931	641 aa		10.15	□□□□□ -0.78
ARHGEF9-231	ENST00000637391	UHRF1BP1	Q6BDS2	1440 aa		10.15	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	KIAA0556	O60303	1618 aa		10.15	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	DENND4B	O75064	1496 aa	Predicted RBP	10.14	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	FHOD3	Q2V2M9	1422 aa		10.14	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	FRMPD1	Q5SYB0	1578 aa		10.14	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	ARHGEF40	Q8TER5	1519 aa		10.13	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.13	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	ABCA8	O94911	1581 aa		10.13	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	TTC37	Q6PGP7	1564 aa		10.13	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	ARID3C	A6NKF2	412 aa		10.12	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	MED1	Q15648	1581 aa	Predicted RBP	10.12	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	PREX1	Q8TCU6	1659 aa		10.12	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	ABCA9	Q8IUA7	1624 aa		10.11	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	ATP10B	O94823	1461 aa		10.1	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	MAGI2	Q86UL8	1455 aa		10.09	□□□□□ -0.79
ARHGEF9-231	ENST00000637391	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.08	□□□□□ -0.8
ARHGEF9-231	ENST00000637391	GOLGA3	Q08378	1498 aa		10.08	□□□□□ -0.8
ARHGEF9-231	ENST00000637391	ARHGEF12	Q9NZN5	1544 aa		10.07	□□□□□ -0.8
ARHGEF9-231	ENST00000637391	SCAF1	Q9H7N4	1312 aa	Known RBP	10.07	□□□□□ -0.8
ARHGEF9-231	ENST00000637391	SETD1B	Q9UPS6	1966 aa	Known RBP	10.06	□□□□□ -0.8
ARHGEF9-231	ENST00000637391	TOM1	O60784	492 aa		10.06	□□□□□ -0.8
ARHGEF9-231	ENST00000637391	PIP4K2B	P78356	416 aa		10.06	□□□□□ -0.8
ARHGEF9-231	ENST00000637391	ZFYVE16	Q7Z3T8	1539 aa		10.06	□□□□□ -0.8

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