RNA–Protein interactions for RNA: ENST00000637115.2

TCF4-283, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-283ENST00000637115 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
TCF4-283ENST00000637115 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
TCF4-283ENST00000637115 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
TCF4-283ENST00000637115 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
TCF4-283ENST00000637115 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
TCF4-283ENST00000637115 MIER1Q8N108 512 aa10.57□□□□□ -0.72
TCF4-283ENST00000637115 ZNF777Q9ULD5 760 aaPredicted RBP10.57□□□□□ -0.72
TCF4-283ENST00000637115 SIN3AQ96ST3 1273 aa10.56□□□□□ -0.72
TCF4-283ENST00000637115 RRP7BPQ9NSQ0 103 aa10.55□□□□□ -0.72
TCF4-283ENST00000637115 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
TCF4-283ENST00000637115 AQRO60306 1485 aaKnown RBP eCLIP10.54□□□□□ -0.72
TCF4-283ENST00000637115 GAPVD1Q14C86 1478 aa10.54□□□□□ -0.72
TCF4-283ENST00000637115 ACIN1Q9UKV3 1341 aaKnown RBP10.54□□□□□ -0.72
TCF4-283ENST00000637115 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
TCF4-283ENST00000637115 DNMBPQ6XZF7 1577 aa10.53□□□□□ -0.72
TCF4-283ENST00000637115 RAB3GAP2Q9H2M9 1393 aa10.52□□□□□ -0.72
TCF4-283ENST00000637115 SCAF1Q9H7N4 1312 aaKnown RBP10.52□□□□□ -0.72
TCF4-283ENST00000637115 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.73
TCF4-283ENST00000637115 URB2Q14146 1524 aaKnown RBP10.51□□□□□ -0.73
TCF4-283ENST00000637115 PHLDB1Q86UU1 1377 aa10.51□□□□□ -0.73
TCF4-283ENST00000637115 CNGB1Q14028 1251 aaPredicted RBP10.5□□□□□ -0.73
TCF4-283ENST00000637115 ABCA10Q8WWZ4 1543 aa10.49□□□□□ -0.73
TCF4-283ENST00000637115 FMN1Q68DA7 1419 aa10.48□□□□□ -0.73
TCF4-283ENST00000637115 SETD5Q9C0A6 1442 aa10.48□□□□□ -0.73
TCF4-283ENST00000637115 POLR3GLQ9BT43 218 aa10.47□□□□□ -0.73
TCF4-283ENST00000637115 LRRC9Q6ZRR7 1453 aa10.47□□□□□ -0.73
TCF4-283ENST00000637115 CDK11AQ9UQ88 783 aaPredicted RBP10.46□□□□□ -0.73
TCF4-283ENST00000637115 DDX10Q13206 875 aaKnown RBP10.46□□□□□ -0.74
TCF4-283ENST00000637115 ZNF326Q5BKZ1 582 aaKnown RBP10.45□□□□□ -0.74
TCF4-283ENST00000637115 TONSLQ96HA7 1378 aa10.45□□□□□ -0.74
TCF4-283ENST00000637115 LAMC3Q9Y6N6 1575 aa10.45□□□□□ -0.74
TCF4-283ENST00000637115 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
TCF4-283ENST00000637115 CLSPNQ9HAW4 1339 aa10.42□□□□□ -0.74
TCF4-283ENST00000637115 TIAM1Q13009 1591 aa10.42□□□□□ -0.74
TCF4-283ENST00000637115 PCF11O94913 1555 aaKnown RBP10.41□□□□□ -0.74
TCF4-283ENST00000637115 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
TCF4-283ENST00000637115 MRC2Q9UBG0 1479 aa10.41□□□□□ -0.74
TCF4-283ENST00000637115 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
TCF4-283ENST00000637115 FOXD1Q16676 465 aa10.39□□□□□ -0.75
TCF4-283ENST00000637115 CFDP1Q9UEE9 299 aaPredicted RBP10.38□□□□□ -0.75
TCF4-283ENST00000637115 FYCO1Q9BQS8 1478 aa10.37□□□□□ -0.75
TCF4-283ENST00000637115 ZNF608Q9ULD9 1512 aaPredicted RBP10.37□□□□□ -0.75
TCF4-283ENST00000637115 FGD6Q6ZV73 1430 aa10.36□□□□□ -0.75
TCF4-283ENST00000637115 PRDM2Q13029 1718 aa10.36□□□□□ -0.75
TCF4-283ENST00000637115 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
TCF4-283ENST00000637115 EFCAB5A4FU69 1503 aa10.35□□□□□ -0.75
TCF4-283ENST00000637115 PLEKHD1A6NEE1 506 aa10.35□□□□□ -0.75
TCF4-283ENST00000637115 ANP32CO43423 234 aa10.35□□□□□ -0.75
TCF4-283ENST00000637115 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
TCF4-283ENST00000637115 SLC4A1APQ9BWU0 796 aaKnown RBP10.34□□□□□ -0.75
TCF4-283ENST00000637115 NCOA2Q15596 1464 aa10.34□□□□□ -0.75
TCF4-283ENST00000637115 CUL7Q14999 1698 aa10.34□□□□□ -0.75
TCF4-283ENST00000637115 KIF21AQ7Z4S6 1674 aa10.34□□□□□ -0.75
TCF4-283ENST00000637115 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
TCF4-283ENST00000637115 SNAPC4Q5SXM2 1469 aa10.33□□□□□ -0.76
TCF4-283ENST00000637115 ZNF644Q9H582 1327 aaPredicted RBP10.33□□□□□ -0.76
TCF4-283ENST00000637115 IFT140Q96RY7 1462 aa10.32□□□□□ -0.76
TCF4-283ENST00000637115 MYOM3Q5VTT5 1437 aa10.31□□□□□ -0.76
TCF4-283ENST00000637115 BCANQ96GW7 911 aa10.31□□□□□ -0.76
TCF4-283ENST00000637115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.3□□□□□ -0.76
TCF4-283ENST00000637115 CCDC18Q5T9S5 1454 aa10.3□□□□□ -0.76
TCF4-283ENST00000637115 CDK13Q14004 1512 aaKnown RBP10.3□□□□□ -0.76
TCF4-283ENST00000637115 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
TCF4-283ENST00000637115 TSPY4P0CV99 314 aa10.28□□□□□ -0.76
TCF4-283ENST00000637115 TSPY10P0CW01 314 aa10.28□□□□□ -0.76
TCF4-283ENST00000637115 CARMIL2Q6F5E8 1435 aa10.28□□□□□ -0.76
TCF4-283ENST00000637115 MPHOSPH9Q99550 1183 aa10.27□□□□□ -0.76
TCF4-283ENST00000637115 PELP1Q8IZL8 1130 aaKnown RBP10.27□□□□□ -0.77
TCF4-283ENST00000637115 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
TCF4-283ENST00000637115 NEFLP07196 543 aa10.26□□□□□ -0.77
TCF4-283ENST00000637115 MAP3K1Q13233 1512 aa10.26□□□□□ -0.77
TCF4-283ENST00000637115 IQGAP2Q13576 1575 aa10.26□□□□□ -0.77
TCF4-283ENST00000637115 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
TCF4-283ENST00000637115 EPRSP07814 1512 aaKnown RBP10.23□□□□□ -0.77
TCF4-283ENST00000637115 HNRNPMP52272 730 aaKnown RBP eCLIP10.23□□□□□ -0.777e-6■■■□□ 17
TCF4-283ENST00000637115 PTPRKQ15262 1439 aa10.23□□□□□ -0.77
TCF4-283ENST00000637115 CTTNBP2Q8WZ74 1663 aa10.23□□□□□ -0.77
TCF4-283ENST00000637115 PRG4Q92954 1404 aaPredicted RBP10.23□□□□□ -0.77
TCF4-283ENST00000637115 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
TCF4-283ENST00000637115 EIF4G2P78344 907 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■■■■■ 31.9
TCF4-283ENST00000637115 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
TCF4-283ENST00000637115 GRIN2AQ12879 1464 aa10.21□□□□□ -0.77
TCF4-283ENST00000637115 KIAA0586Q9BVV6 1533 aa10.21□□□□□ -0.77
TCF4-283ENST00000637115 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.77
TCF4-283ENST00000637115 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
TCF4-283ENST00000637115 PKD2Q13563 968 aa10.2□□□□□ -0.78
TCF4-283ENST00000637115 HECW1Q76N89 1606 aa10.2□□□□□ -0.78
TCF4-283ENST00000637115 UACAQ9BZF9 1416 aa10.2□□□□□ -0.78
TCF4-283ENST00000637115 MAPKBP1O60336 1514 aa10.2□□□□□ -0.78
TCF4-283ENST00000637115 PLB1Q6P1J6 1458 aa10.2□□□□□ -0.78
TCF4-283ENST00000637115 ADAMTS12P58397 1594 aa10.19□□□□□ -0.78
TCF4-283ENST00000637115 RGL3Q3MIN7 710 aa10.19□□□□□ -0.78
TCF4-283ENST00000637115 TARBP1Q13395 1621 aaKnown RBP10.19□□□□□ -0.78
TCF4-283ENST00000637115 SENP3-EIF4A1A0A087X0R7 540 aa10.19□□□□□ -0.78
TCF4-283ENST00000637115 HFM1A2PYH4 1435 aa10.19□□□□□ -0.78
TCF4-283ENST00000637115 PTPRGP23470 1445 aa10.19□□□□□ -0.78
TCF4-283ENST00000637115 CFAP43Q8NDM7 1665 aa10.19□□□□□ -0.78
TCF4-283ENST00000637115 NAIPQ13075 1403 aa10.18□□□□□ -0.78
TCF4-283ENST00000637115 FAM9BQ8IZU0 186 aa10.18□□□□□ -0.78
TCF4-283ENST00000637115 WDR97A6NE52 1622 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms