RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 RUSC2Q8N2Y8 1516 aa10.92□□□□□ -0.66
CACNA1D-220ENST00000636999 GAPVD1Q14C86 1478 aa10.92□□□□□ -0.66
CACNA1D-220ENST00000636999 RAD54L2Q9Y4B4 1467 aa10.92□□□□□ -0.66
CACNA1D-220ENST00000636999 IGF1RP08069 1367 aa10.9□□□□□ -0.66
CACNA1D-220ENST00000636999 MRC2Q9UBG0 1479 aa10.9□□□□□ -0.66
CACNA1D-220ENST00000636999 CHIC2Q9UKJ5 165 aa10.9□□□□□ -0.66
CACNA1D-220ENST00000636999 LAMC3Q9Y6N6 1575 aa10.89□□□□□ -0.67
CACNA1D-220ENST00000636999 VPS8Q8N3P4 1428 aa10.89□□□□□ -0.67
CACNA1D-220ENST00000636999 POLR3GLQ9BT43 218 aa10.89□□□□□ -0.67
CACNA1D-220ENST00000636999 FMN1Q68DA7 1419 aa10.88□□□□□ -0.67
CACNA1D-220ENST00000636999 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
CACNA1D-220ENST00000636999 CFDP1Q9UEE9 299 aaPredicted RBP10.88□□□□□ -0.67
CACNA1D-220ENST00000636999 TOPBP1Q92547 1522 aa10.87□□□□□ -0.67
CACNA1D-220ENST00000636999 ERICH6Q7L0X2 663 aa10.87□□□□□ -0.67
CACNA1D-220ENST00000636999 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
CACNA1D-220ENST00000636999 SYNJ1O43426 1573 aa10.85□□□□□ -0.67
CACNA1D-220ENST00000636999 MYT1Q01538 1121 aa10.85□□□□□ -0.67
CACNA1D-220ENST00000636999 AQRO60306 1485 aaKnown RBP eCLIP10.84□□□□□ -0.67
CACNA1D-220ENST00000636999 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
CACNA1D-220ENST00000636999 TOP2BQ02880 1626 aa10.83□□□□□ -0.67
CACNA1D-220ENST00000636999 CUX1P39880 1505 aa10.83□□□□□ -0.68
CACNA1D-220ENST00000636999 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
CACNA1D-220ENST00000636999 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
CACNA1D-220ENST00000636999 IFT140Q96RY7 1462 aa10.82□□□□□ -0.68
CACNA1D-220ENST00000636999 DNMBPQ6XZF7 1577 aa10.82□□□□□ -0.68
CACNA1D-220ENST00000636999 GRIN2BQ13224 1484 aa10.82□□□□□ -0.68
CACNA1D-220ENST00000636999 BCANQ96GW7 911 aa10.82□□□□□ -0.68
CACNA1D-220ENST00000636999 CCNB3Q8WWL7 1395 aa10.81□□□□□ -0.68
CACNA1D-220ENST00000636999 MIER1Q8N108 512 aa10.81□□□□□ -0.68
CACNA1D-220ENST00000636999 FHOD3Q2V2M9 1422 aa10.8□□□□□ -0.68
CACNA1D-220ENST00000636999 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
CACNA1D-220ENST00000636999 RRP7BPQ9NSQ0 103 aa10.79□□□□□ -0.68
CACNA1D-220ENST00000636999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.79□□□□□ -0.68
CACNA1D-220ENST00000636999 TONSLQ96HA7 1378 aa10.76□□□□□ -0.69
CACNA1D-220ENST00000636999 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
CACNA1D-220ENST00000636999 PTPRGP23470 1445 aa10.74□□□□□ -0.69
CACNA1D-220ENST00000636999 SLC4A1APQ9BWU0 796 aaKnown RBP10.73□□□□□ -0.69
CACNA1D-220ENST00000636999 ARHGAP35Q9NRY4 1499 aa10.73□□□□□ -0.69
CACNA1D-220ENST00000636999 ERICH3Q5RHP9 1530 aa10.73□□□□□ -0.69
CACNA1D-220ENST00000636999 ABCA10Q8WWZ4 1543 aa10.72□□□□□ -0.69
CACNA1D-220ENST00000636999 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
CACNA1D-220ENST00000636999 STAG3Q9UJ98 1225 aa10.72□□□□□ -0.69
CACNA1D-220ENST00000636999 ANP32CO43423 234 aa10.72□□□□□ -0.69
CACNA1D-220ENST00000636999 PRXQ9BXM0 1461 aa10.71□□□□□ -0.69
CACNA1D-220ENST00000636999 KIF21BO75037 1637 aa10.71□□□□□ -0.7
CACNA1D-220ENST00000636999 EFCAB2Q5VUJ9 269 aa10.69□□□□□ -0.7
CACNA1D-220ENST00000636999 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
CACNA1D-220ENST00000636999 DDX10Q13206 875 aaKnown RBP10.69□□□□□ -0.7
CACNA1D-220ENST00000636999 CCDC18Q5T9S5 1454 aa10.68□□□□□ -0.7
CACNA1D-220ENST00000636999 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
CACNA1D-220ENST00000636999 TRHP20396 242 aaPredicted RBP10.66□□□□□ -0.7
CACNA1D-220ENST00000636999 CYB5RLQ6IPT4 315 aa10.64□□□□□ -0.71
CACNA1D-220ENST00000636999 HIRIP3Q9BW71 556 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-220ENST00000636999 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
CACNA1D-220ENST00000636999 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
CACNA1D-220ENST00000636999 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
CACNA1D-220ENST00000636999 ARID4BQ4LE39 1312 aaPredicted RBP10.62□□□□□ -0.71
CACNA1D-220ENST00000636999 FKBP8Q14318 412 aa10.6□□□□□ -0.71
CACNA1D-220ENST00000636999 PRG4Q92954 1404 aaPredicted RBP10.6□□□□□ -0.71
CACNA1D-220ENST00000636999 CLSPNQ9HAW4 1339 aa10.6□□□□□ -0.71
CACNA1D-220ENST00000636999 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
CACNA1D-220ENST00000636999 MAGI1Q96QZ7 1491 aaPredicted RBP10.59□□□□□ -0.71
CACNA1D-220ENST00000636999 SETD5Q9C0A6 1442 aa10.59□□□□□ -0.71
CACNA1D-220ENST00000636999 KIAA0586Q9BVV6 1533 aa10.59□□□□□ -0.71
CACNA1D-220ENST00000636999 EFCAB5A4FU69 1503 aa10.59□□□□□ -0.71
CACNA1D-220ENST00000636999 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
CACNA1D-220ENST00000636999 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
CACNA1D-220ENST00000636999 ANKRD30AQ9BXX3 1397 aa10.57□□□□□ -0.72
CACNA1D-220ENST00000636999 CUL7Q14999 1698 aa10.57□□□□□ -0.72
CACNA1D-220ENST00000636999 ARAP1Q96P48 1450 aa10.57□□□□□ -0.72
CACNA1D-220ENST00000636999 ZNF608Q9ULD9 1512 aaPredicted RBP10.57□□□□□ -0.72
CACNA1D-220ENST00000636999 KANK1Q14678 1352 aa10.57□□□□□ -0.72
CACNA1D-220ENST00000636999 HNRNPMP52272 730 aaKnown RBP eCLIP10.56□□□□□ -0.72
CACNA1D-220ENST00000636999 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
CACNA1D-220ENST00000636999 GRIN2AQ12879 1464 aa10.54□□□□□ -0.72
CACNA1D-220ENST00000636999 SPAG9O60271 1321 aaKnown RBP10.54□□□□□ -0.72
CACNA1D-220ENST00000636999 FYCO1Q9BQS8 1478 aa10.53□□□□□ -0.72
CACNA1D-220ENST00000636999 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
CACNA1D-220ENST00000636999 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
CACNA1D-220ENST00000636999 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
CACNA1D-220ENST00000636999 PPP1R15AO75807 674 aaPredicted RBP10.52□□□□□ -0.73
CACNA1D-220ENST00000636999 GGT6Q6P531 493 aa10.52□□□□□ -0.73
CACNA1D-220ENST00000636999 IQGAP2Q13576 1575 aa10.51□□□□□ -0.73
CACNA1D-220ENST00000636999 EIF4G2P78344 907 aaKnown RBP eCLIP10.51□□□□□ -0.73
CACNA1D-220ENST00000636999 RAB3GAP2Q9H2M9 1393 aa10.51□□□□□ -0.73
CACNA1D-220ENST00000636999 LRRC9Q6ZRR7 1453 aa10.51□□□□□ -0.73
CACNA1D-220ENST00000636999 TIMELESSQ9UNS1 1208 aa10.5□□□□□ -0.73
CACNA1D-220ENST00000636999 NUP155O75694 1391 aa10.49□□□□□ -0.73
CACNA1D-220ENST00000636999 PKD2Q13563 968 aa10.49□□□□□ -0.73
CACNA1D-220ENST00000636999 MLECQ14165 292 aa10.49□□□□□ -0.73
CACNA1D-220ENST00000636999 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
CACNA1D-220ENST00000636999 KIF21AQ7Z4S6 1674 aa10.48□□□□□ -0.73
CACNA1D-220ENST00000636999 KIF3BO15066 747 aa10.48□□□□□ -0.73
CACNA1D-220ENST00000636999 FAM9BQ8IZU0 186 aa10.47□□□□□ -0.73
CACNA1D-220ENST00000636999 MPHOSPH9Q99550 1183 aa10.47□□□□□ -0.73
CACNA1D-220ENST00000636999 FAM69CQ0P6D2 419 aa10.47□□□□□ -0.73
CACNA1D-220ENST00000636999 FGD6Q6ZV73 1430 aa10.47□□□□□ -0.73
CACNA1D-220ENST00000636999 WDR62O43379 1518 aa10.45□□□□□ -0.74
CACNA1D-220ENST00000636999 NCOA2Q15596 1464 aa10.45□□□□□ -0.74
CACNA1D-220ENST00000636999 PHLDB1Q86UU1 1377 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms