RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 MYO15BQ96JP2 1530 aa9.77□□□□□ -0.85
CLN5-210ENST00000636520 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
CLN5-210ENST00000636520 RSF1Q96T23 1441 aaPredicted RBP9.77□□□□□ -0.85
CLN5-210ENST00000636520 HMGB2P26583 209 aaKnown RBP9.75□□□□□ -0.85
CLN5-210ENST00000636520 PTPRGP23470 1445 aa9.75□□□□□ -0.85
CLN5-210ENST00000636520 CLIP1P30622 1438 aa9.74□□□□□ -0.85
CLN5-210ENST00000636520 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
CLN5-210ENST00000636520 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
CLN5-210ENST00000636520 POGKQ9P215 609 aa9.7□□□□□ -0.86
CLN5-210ENST00000636520 TOM1O60784 492 aa9.69□□□□□ -0.86
CLN5-210ENST00000636520 FANCD2Q9BXW9 1451 aa9.69□□□□□ -0.86
CLN5-210ENST00000636520 CUX2O14529 1486 aa9.68□□□□□ -0.86
CLN5-210ENST00000636520 ATF3P18847 181 aa9.68□□□□□ -0.86
CLN5-210ENST00000636520 EIF4G2P78344 907 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLN5-210ENST00000636520 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
CLN5-210ENST00000636520 PIP4K2BP78356 416 aa9.66□□□□□ -0.86
CLN5-210ENST00000636520 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
CLN5-210ENST00000636520 PCGF6Q9BYE7 350 aa9.66□□□□□ -0.86
CLN5-210ENST00000636520 ZBTB47Q9UFB7 747 aaPredicted RBP9.66□□□□□ -0.86
CLN5-210ENST00000636520 ATAD2BQ9ULI0 1458 aa9.64□□□□□ -0.87
CLN5-210ENST00000636520 CCER1Q8TC90 406 aaPredicted RBP9.64□□□□□ -0.87
CLN5-210ENST00000636520 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
CLN5-210ENST00000636520 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
CLN5-210ENST00000636520 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
CLN5-210ENST00000636520 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
CLN5-210ENST00000636520 ARXQ96QS3 562 aa9.63□□□□□ -0.87
CLN5-210ENST00000636520 CARMIL1Q5VZK9 1371 aa9.63□□□□□ -0.87
CLN5-210ENST00000636520 NCAPD3P42695 1498 aa9.63□□□□□ -0.87
CLN5-210ENST00000636520 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
CLN5-210ENST00000636520 SPAG9O60271 1321 aaKnown RBP9.61□□□□□ -0.87
CLN5-210ENST00000636520 THEMISQ8N1K5 641 aaPredicted RBP9.61□□□□□ -0.87
CLN5-210ENST00000636520 CC2D2AQ9P2K1 1620 aa9.61□□□□□ -0.87
CLN5-210ENST00000636520 CCNB3Q8WWL7 1395 aa9.6□□□□□ -0.87
CLN5-210ENST00000636520 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
CLN5-210ENST00000636520 IFT140Q96RY7 1462 aa9.59□□□□□ -0.87
CLN5-210ENST00000636520 MSH5O43196 834 aa9.59□□□□□ -0.87
CLN5-210ENST00000636520 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
CLN5-210ENST00000636520 EVA1CP58658 441 aa9.58□□□□□ -0.88
CLN5-210ENST00000636520 ANKLE2Q86XL3 938 aa9.57□□□□□ -0.88
CLN5-210ENST00000636520 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
CLN5-210ENST00000636520 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
CLN5-210ENST00000636520 KIF3BO15066 747 aa9.57□□□□□ -0.88
CLN5-210ENST00000636520 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
CLN5-210ENST00000636520 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
CLN5-210ENST00000636520 PROSER2Q86WR7 435 aaPredicted RBP9.56□□□□□ -0.88
CLN5-210ENST00000636520 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
CLN5-210ENST00000636520 GOLGA3Q08378 1498 aa9.56□□□□□ -0.88
CLN5-210ENST00000636520 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
CLN5-210ENST00000636520 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLN5-210ENST00000636520 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
CLN5-210ENST00000636520 PAK3O75914 559 aaPredicted RBP9.54□□□□□ -0.88
CLN5-210ENST00000636520 GRIN2BQ13224 1484 aa9.5□□□□□ -0.89
CLN5-210ENST00000636520 PPARGC1BQ86YN6 1023 aaKnown RBP9.5□□□□□ -0.89
CLN5-210ENST00000636520 EEA1Q15075 1411 aa9.5□□□□□ -0.89
CLN5-210ENST00000636520 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
CLN5-210ENST00000636520 CDCA8Q53HL2 280 aa9.49□□□□□ -0.89
CLN5-210ENST00000636520 SRPK2P78362 688 aaKnown RBP9.48□□□□□ -0.89
CLN5-210ENST00000636520 NGDNQ8NEJ9 315 aaKnown RBP9.48□□□□□ -0.89
CLN5-210ENST00000636520 NGLY1Q96IV0 654 aa9.48□□□□□ -0.89
CLN5-210ENST00000636520 DISP3Q9P2K9 1392 aa9.46□□□□□ -0.89
CLN5-210ENST00000636520 PPP6R1Q9UPN7 881 aa9.46□□□□□ -0.89
CLN5-210ENST00000636520 TMC1Q8TDI8 760 aa9.46□□□□□ -0.9
CLN5-210ENST00000636520 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.9
CLN5-210ENST00000636520 FHAD1B1AJZ9 1412 aa9.45□□□□□ -0.9
CLN5-210ENST00000636520 G3V3G9 751 aa9.45□□□□□ -0.9
CLN5-210ENST00000636520 DCAF8Q5TAQ9 597 aa9.45□□□□□ -0.9
CLN5-210ENST00000636520 NEUROD1Q13562 356 aa9.45□□□□□ -0.9
CLN5-210ENST00000636520 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
CLN5-210ENST00000636520 PSME1Q06323 249 aa9.44□□□□□ -0.9
CLN5-210ENST00000636520 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
CLN5-210ENST00000636520 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
CLN5-210ENST00000636520 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
CLN5-210ENST00000636520 RGL3Q3MIN7 710 aa9.42□□□□□ -0.9
CLN5-210ENST00000636520 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
CLN5-210ENST00000636520 AQRO60306 1485 aaKnown RBP eCLIP9.42□□□□□ -0.9
CLN5-210ENST00000636520 TEX14Q8IWB6 1497 aa9.42□□□□□ -0.9
CLN5-210ENST00000636520 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
CLN5-210ENST00000636520 HNRNPMP52272 730 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLN5-210ENST00000636520 MROH2BQ7Z745 1585 aa9.41□□□□□ -0.9
CLN5-210ENST00000636520 PDE3BQ13370 1112 aa9.41□□□□□ -0.9
CLN5-210ENST00000636520 GTF2E1P29083 439 aaPredicted RBP9.4□□□□□ -0.9
CLN5-210ENST00000636520 CEP162Q5TB80 1403 aa9.39□□□□□ -0.91
CLN5-210ENST00000636520 FMN1Q68DA7 1419 aa9.38□□□□□ -0.91
CLN5-210ENST00000636520 CHMP4AQ9BY43 222 aa9.37□□□□□ -0.91
CLN5-210ENST00000636520 STK26Q9P289 416 aa9.37□□□□□ -0.91
CLN5-210ENST00000636520 LAMC3Q9Y6N6 1575 aa9.37□□□□□ -0.91
CLN5-210ENST00000636520 VGFO15240 615 aaPredicted RBP9.36□□□□□ -0.91
CLN5-210ENST00000636520 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
CLN5-210ENST00000636520 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
CLN5-210ENST00000636520 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
CLN5-210ENST00000636520 C16orf71Q8IYS4 520 aaPredicted RBP9.36□□□□□ -0.91
CLN5-210ENST00000636520 LMTK3Q96Q04 1460 aa9.35□□□□□ -0.91
CLN5-210ENST00000636520 PHLDB1Q86UU1 1377 aa9.35□□□□□ -0.91
CLN5-210ENST00000636520 ZEB1P37275 1124 aaPredicted RBP9.35□□□□□ -0.91
CLN5-210ENST00000636520 AKNAQ7Z591 1439 aa9.35□□□□□ -0.91
CLN5-210ENST00000636520 NESP48681 1621 aa9.34□□□□□ -0.91
CLN5-210ENST00000636520 PPM1GO15355 546 aaPredicted RBP9.34□□□□□ -0.91
CLN5-210ENST00000636520 WDHD1O75717 1129 aaPredicted RBP9.34□□□□□ -0.91
CLN5-210ENST00000636520 SYNJ1O43426 1573 aa9.34□□□□□ -0.91
CLN5-210ENST00000636520 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms