RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
CLN5-210ENST00000636520 NISCHQ9Y2I1 1504 aa12.56□□□□□ -0.4
CLN5-210ENST00000636520 FAM9AQ8IZU1 332 aaPredicted RBP12.26□□□□□ -0.45
CLN5-210ENST00000636520 ABCC9O60706 1549 aa11.6□□□□□ -0.55
CLN5-210ENST00000636520 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLN5-210ENST00000636520 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
CLN5-210ENST00000636520 APLP2Q06481 763 aa11.23□□□□□ -0.61
CLN5-210ENST00000636520 SUPT5HO00267 1087 aaKnown RBP11.22□□□□□ -0.61
CLN5-210ENST00000636520 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
CLN5-210ENST00000636520 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLN5-210ENST00000636520 AEBP2Q6ZN18 517 aaPredicted RBP11.17□□□□□ -0.62
CLN5-210ENST00000636520 FBLN2P98095 1184 aa11.13□□□□□ -0.63
CLN5-210ENST00000636520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
CLN5-210ENST00000636520 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
CLN5-210ENST00000636520 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
CLN5-210ENST00000636520 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
CLN5-210ENST00000636520 TTBK1Q5TCY1 1321 aaPredicted RBP11.02□□□□□ -0.64
CLN5-210ENST00000636520 ESF1Q9H501 851 aaKnown RBP11□□□□□ -0.65
CLN5-210ENST00000636520 TRIM41Q8WV44 630 aa10.91□□□□□ -0.66
CLN5-210ENST00000636520 ERCC6Q03468 1493 aa10.84□□□□□ -0.67
CLN5-210ENST00000636520 RANGAP1P46060 587 aaPredicted RBP10.81□□□□□ -0.68
CLN5-210ENST00000636520 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
CLN5-210ENST00000636520 RB1CC1Q8TDY2 1594 aa10.74□□□□□ -0.69
CLN5-210ENST00000636520 UBTFP17480 764 aaKnown RBP10.71□□□□□ -0.7
CLN5-210ENST00000636520 CHIC1Q5VXU3 224 aa10.7□□□□□ -0.7
CLN5-210ENST00000636520 CHMP7Q8WUX9 453 aaPredicted RBP10.69□□□□□ -0.7
CLN5-210ENST00000636520 BCANQ96GW7 911 aa10.66□□□□□ -0.7
CLN5-210ENST00000636520 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
CLN5-210ENST00000636520 ARID4BQ4LE39 1312 aaPredicted RBP10.57□□□□□ -0.72
CLN5-210ENST00000636520 CDK11AQ9UQ88 783 aaPredicted RBP10.56□□□□□ -0.72
CLN5-210ENST00000636520 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
CLN5-210ENST00000636520 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
CLN5-210ENST00000636520 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
CLN5-210ENST00000636520 FOXD1Q16676 465 aa10.46□□□□□ -0.74
CLN5-210ENST00000636520 NACADO15069 1562 aa10.45□□□□□ -0.74
CLN5-210ENST00000636520 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
CLN5-210ENST00000636520 SCAF1Q9H7N4 1312 aaKnown RBP10.42□□□□□ -0.74
CLN5-210ENST00000636520 DCAF8L1A6NGE4 600 aa10.39□□□□□ -0.75
CLN5-210ENST00000636520 PDS5BQ9NTI5 1447 aa10.38□□□□□ -0.75
CLN5-210ENST00000636520 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
CLN5-210ENST00000636520 CYB5RLQ6IPT4 315 aa10.35□□□□□ -0.75
CLN5-210ENST00000636520 CCDC180Q9P1Z9 1646 aa10.34□□□□□ -0.75
CLN5-210ENST00000636520 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
CLN5-210ENST00000636520 SLC4A1APQ9BWU0 796 aaKnown RBP10.29□□□□□ -0.76
CLN5-210ENST00000636520 KCNH8Q96L42 1107 aa10.24□□□□□ -0.77
CLN5-210ENST00000636520 PHF23Q9BUL5 403 aaPredicted RBP10.21□□□□□ -0.77
CLN5-210ENST00000636520 ZNF777Q9ULD5 760 aaPredicted RBP10.21□□□□□ -0.77
CLN5-210ENST00000636520 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.78
CLN5-210ENST00000636520 BAZ1BQ9UIG0 1483 aaKnown RBP10.2□□□□□ -0.78
CLN5-210ENST00000636520 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
CLN5-210ENST00000636520 PLEKHD1A6NEE1 506 aa10.19□□□□□ -0.78
CLN5-210ENST00000636520 CHGAP10645 457 aaKnown RBP10.18□□□□□ -0.78
CLN5-210ENST00000636520 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
CLN5-210ENST00000636520 A0A0G2JS52 829 aa10.16□□□□□ -0.78
CLN5-210ENST00000636520 MYT1Q01538 1121 aa10.16□□□□□ -0.78
CLN5-210ENST00000636520 NPM2Q86SE8 214 aaKnown RBP10.13□□□□□ -0.79
CLN5-210ENST00000636520 TSPY4P0CV99 314 aa10.13□□□□□ -0.79
CLN5-210ENST00000636520 TSPY10P0CW01 314 aa10.13□□□□□ -0.79
CLN5-210ENST00000636520 MLECQ14165 292 aa10.09□□□□□ -0.79
CLN5-210ENST00000636520 P3H3Q8IVL6 736 aa10.09□□□□□ -0.79
CLN5-210ENST00000636520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLN5-210ENST00000636520 ITGAEP38570 1179 aa10.07□□□□□ -0.8
CLN5-210ENST00000636520 TRIM52Q96A61 297 aa10.06□□□□□ -0.8
CLN5-210ENST00000636520 CARMIL2Q6F5E8 1435 aa10.04□□□□□ -0.8
CLN5-210ENST00000636520 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
CLN5-210ENST00000636520 NEFMP07197 916 aa10.03□□□□□ -0.8
CLN5-210ENST00000636520 SENP3Q9H4L4 574 aaPredicted RBP10.02□□□□□ -0.81
CLN5-210ENST00000636520 FAM50AQ14320 339 aaKnown RBP10.01□□□□□ -0.81
CLN5-210ENST00000636520 MEX3CQ5U5Q3 659 aaKnown RBP10□□□□□ -0.81
CLN5-210ENST00000636520 SLC24A1O60721 1099 aa9.99□□□□□ -0.81
CLN5-210ENST00000636520 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
CLN5-210ENST00000636520 DMRT2Q9Y5R5 561 aa9.97□□□□□ -0.81
CLN5-210ENST00000636520 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.81
CLN5-210ENST00000636520 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
CLN5-210ENST00000636520 POLR3GLQ9BT43 218 aa9.96□□□□□ -0.82
CLN5-210ENST00000636520 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
CLN5-210ENST00000636520 EID1Q9Y6B2 187 aa9.94□□□□□ -0.82
CLN5-210ENST00000636520 CADPSQ9ULU8 1353 aa9.93□□□□□ -0.82
CLN5-210ENST00000636520 ZNF326Q5BKZ1 582 aaKnown RBP9.92□□□□□ -0.82
CLN5-210ENST00000636520 LMOD2Q6P5Q4 547 aa9.92□□□□□ -0.82
CLN5-210ENST00000636520 CCDC9Q9Y3X0 531 aaKnown RBP9.91□□□□□ -0.82
CLN5-210ENST00000636520 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
CLN5-210ENST00000636520 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
CLN5-210ENST00000636520 EFCAB2Q5VUJ9 269 aa9.88□□□□□ -0.83
CLN5-210ENST00000636520 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
CLN5-210ENST00000636520 ABCC8Q09428 1581 aa9.86□□□□□ -0.83
CLN5-210ENST00000636520 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
CLN5-210ENST00000636520 BAZ1AQ9NRL2 1556 aaPredicted RBP9.83□□□□□ -0.84
CLN5-210ENST00000636520 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
CLN5-210ENST00000636520 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
CLN5-210ENST00000636520 ZBTB7CA1YPR0 619 aa9.82□□□□□ -0.84
CLN5-210ENST00000636520 NPHP1O15259 732 aa9.82□□□□□ -0.84
CLN5-210ENST00000636520 SOGA1O94964 1423 aa9.82□□□□□ -0.84
CLN5-210ENST00000636520 KANK1Q14678 1352 aa9.8□□□□□ -0.84
CLN5-210ENST00000636520 CFDP1Q9UEE9 299 aaPredicted RBP9.8□□□□□ -0.84
CLN5-210ENST00000636520 KIF27Q86VH2 1401 aa9.8□□□□□ -0.84
CLN5-210ENST00000636520 POGZQ7Z3K3 1410 aa9.8□□□□□ -0.84
CLN5-210ENST00000636520 GGT6Q6P531 493 aa9.79□□□□□ -0.84
CLN5-210ENST00000636520 MTUS2Q5JR59 1369 aa9.79□□□□□ -0.84
CLN5-210ENST00000636520 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms