RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 IQGAP2Q13576 1575 aa8.85□□□□□ -0.99
CHD2-224ENST00000636410 KIAA0586Q9BVV6 1533 aa8.85□□□□□ -0.99
CHD2-224ENST00000636410 RIMBP3CA6NJZ7 1639 aa8.84□□□□□ -0.99
CHD2-224ENST00000636410 RIMBP3BA6NNM3 1639 aa8.84□□□□□ -0.99
CHD2-224ENST00000636410 RIMBP3Q9UFD9 1639 aa8.84□□□□□ -0.99
CHD2-224ENST00000636410 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
CHD2-224ENST00000636410 ARHGEF11O15085 1522 aa8.83□□□□□ -1
CHD2-224ENST00000636410 GOLGA3Q08378 1498 aa8.81□□□□□ -1
CHD2-224ENST00000636410 ERCC6L2Q5T890 1561 aa8.79□□□□□ -1
CHD2-224ENST00000636410 UGGT2Q9NYU1 1516 aa8.79□□□□□ -1
CHD2-224ENST00000636410 KIAA0556O60303 1618 aa8.77□□□□□ -1.01
CHD2-224ENST00000636410 PRG4Q92954 1404 aaPredicted RBP8.77□□□□□ -1.01
CHD2-224ENST00000636410 ARAP1Q96P48 1450 aa8.76□□□□□ -1.01
CHD2-224ENST00000636410 SAMD9Q5K651 1589 aa8.75□□□□□ -1.01
CHD2-224ENST00000636410 JPH4Q96JJ6 628 aa8.75□□□□□ -1.01
CHD2-224ENST00000636410 DISP1Q96F81 1524 aa8.75□□□□□ -1.01
CHD2-224ENST00000636410 CARMIL2Q6F5E8 1435 aa8.74□□□□□ -1.01
CHD2-224ENST00000636410 EFCAB5A4FU69 1503 aa8.73□□□□□ -1.01
CHD2-224ENST00000636410 UBTFP17480 764 aaKnown RBP8.7□□□□□ -1.02
CHD2-224ENST00000636410 EHMT2Q96KQ7 1210 aa8.7□□□□□ -1.02
CHD2-224ENST00000636410 TNIKQ9UKE5 1360 aa8.7□□□□□ -1.02
CHD2-224ENST00000636410 ADCY10Q96PN6 1610 aa8.67□□□□□ -1.02
CHD2-224ENST00000636410 ARHGAP35Q9NRY4 1499 aa8.66□□□□□ -1.02
CHD2-224ENST00000636410 PTPRGP23470 1445 aa8.66□□□□□ -1.02
CHD2-224ENST00000636410 CYB5RLQ6IPT4 315 aa8.66□□□□□ -1.02
CHD2-224ENST00000636410 ABCA8O94911 1581 aa8.65□□□□□ -1.02
CHD2-224ENST00000636410 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.03
CHD2-224ENST00000636410 ABCC2Q92887 1545 aa8.64□□□□□ -1.03
CHD2-224ENST00000636410 FHOD3Q2V2M9 1422 aa8.64□□□□□ -1.03
CHD2-224ENST00000636410 UHRF1BP1LA0JNW5 1464 aa8.64□□□□□ -1.03
CHD2-224ENST00000636410 RANGAP1P46060 587 aaPredicted RBP8.63□□□□□ -1.03
CHD2-224ENST00000636410 CLIP1P30622 1438 aa8.63□□□□□ -1.03
CHD2-224ENST00000636410 CEP162Q5TB80 1403 aa8.63□□□□□ -1.03
CHD2-224ENST00000636410 UACAQ9BZF9 1416 aa8.63□□□□□ -1.03
CHD2-224ENST00000636410 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
CHD2-224ENST00000636410 ZCCHC11Q5TAX3 1644 aaKnown RBP8.62□□□□□ -1.03
CHD2-224ENST00000636410 TTBK1Q5TCY1 1321 aaPredicted RBP8.61□□□□□ -1.03
CHD2-224ENST00000636410 P3H3Q8IVL6 736 aa8.61□□□□□ -1.03
CHD2-224ENST00000636410 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
CHD2-224ENST00000636410 HECW1Q76N89 1606 aa8.61□□□□□ -1.03
CHD2-224ENST00000636410 LOC105371045A0A1W2PR82 267 aa8.6□□□□□ -1.03
CHD2-224ENST00000636410 PCF11O94913 1555 aaKnown RBP8.6□□□□□ -1.03
CHD2-224ENST00000636410 MAPKBP1O60336 1514 aa8.59□□□□□ -1.03
CHD2-224ENST00000636410 KDM5BQ9UGL1 1544 aa8.59□□□□□ -1.03
CHD2-224ENST00000636410 LRRIQ1Q96JM4 1722 aa8.59□□□□□ -1.03
CHD2-224ENST00000636410 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
CHD2-224ENST00000636410 FYCO1Q9BQS8 1478 aa8.56□□□□□ -1.04
CHD2-224ENST00000636410 KIF13AQ9H1H9 1805 aa8.55□□□□□ -1.04
CHD2-224ENST00000636410 NPM1P06748 294 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHD2-224ENST00000636410 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
CHD2-224ENST00000636410 DIP2BQ9P265 1576 aa8.54□□□□□ -1.04
CHD2-224ENST00000636410 EPRSP07814 1512 aaKnown RBP8.54□□□□□ -1.04
CHD2-224ENST00000636410 ATP10BO94823 1461 aa8.53□□□□□ -1.04
CHD2-224ENST00000636410 CCDC18Q5T9S5 1454 aa8.53□□□□□ -1.04
CHD2-224ENST00000636410 CDK13Q14004 1512 aaKnown RBP8.53□□□□□ -1.04
CHD2-224ENST00000636410 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
CHD2-224ENST00000636410 CFAP43Q8NDM7 1665 aa8.53□□□□□ -1.04
CHD2-224ENST00000636410 WDR7Q9Y4E6 1490 aa8.52□□□□□ -1.05
CHD2-224ENST00000636410 VPS8Q8N3P4 1428 aa8.52□□□□□ -1.05
CHD2-224ENST00000636410 GLI2P10070 1586 aa8.51□□□□□ -1.05
CHD2-224ENST00000636410 ABCC10Q5T3U5 1492 aa8.51□□□□□ -1.05
CHD2-224ENST00000636410 MAP3K4Q9Y6R4 1608 aa8.5□□□□□ -1.05
CHD2-224ENST00000636410 ABCA9Q8IUA7 1624 aa8.48□□□□□ -1.05
CHD2-224ENST00000636410 ARID3CA6NKF2 412 aa8.48□□□□□ -1.05
CHD2-224ENST00000636410 TIAM1Q13009 1591 aa8.48□□□□□ -1.05
CHD2-224ENST00000636410 KIF14Q15058 1648 aa8.47□□□□□ -1.05
CHD2-224ENST00000636410 ATP1B4Q9UN42 357 aaPredicted RBP8.47□□□□□ -1.05
CHD2-224ENST00000636410 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.05
CHD2-224ENST00000636410 MAGI3Q5TCQ9 1506 aa8.46□□□□□ -1.05
CHD2-224ENST00000636410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.46□□□□□ -1.06
CHD2-224ENST00000636410 HNRNPUL2Q1KMD3 747 aaKnown RBP8.46□□□□□ -1.06
CHD2-224ENST00000636410 MAP3K1Q13233 1512 aa8.45□□□□□ -1.06
CHD2-224ENST00000636410 EHBP1L1Q8N3D4 1523 aa8.45□□□□□ -1.06
CHD2-224ENST00000636410 TSPOAP1O95153 1857 aa8.45□□□□□ -1.06
CHD2-224ENST00000636410 TTC37Q6PGP7 1564 aa8.45□□□□□ -1.06
CHD2-224ENST00000636410 TRHP20396 242 aaPredicted RBP8.45□□□□□ -1.06
CHD2-224ENST00000636410 MYO5CQ9NQX4 1742 aa8.45□□□□□ -1.06
CHD2-224ENST00000636410 TROQ12816 1431 aaPredicted RBP8.45□□□□□ -1.06
CHD2-224ENST00000636410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD2-224ENST00000636410 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
CHD2-224ENST00000636410 PLEKHD1A6NEE1 506 aa8.43□□□□□ -1.06
CHD2-224ENST00000636410 FAM69CQ0P6D2 419 aa8.43□□□□□ -1.06
CHD2-224ENST00000636410 CFAP74Q9C0B2 1584 aa8.43□□□□□ -1.06
CHD2-224ENST00000636410 SUPT6HQ7KZ85 1726 aaKnown RBP8.43□□□□□ -1.06
CHD2-224ENST00000636410 PREX2Q70Z35 1606 aa8.42□□□□□ -1.06
CHD2-224ENST00000636410 CDC42BPAQ5VT25 1732 aa8.41□□□□□ -1.06
CHD2-224ENST00000636410 ITSN2Q9NZM3 1697 aa8.41□□□□□ -1.06
CHD2-224ENST00000636410 TEX14Q8IWB6 1497 aa8.41□□□□□ -1.06
CHD2-224ENST00000636410 ARAP3Q8WWN8 1544 aa8.4□□□□□ -1.06
CHD2-224ENST00000636410 LRRC9Q6ZRR7 1453 aa8.4□□□□□ -1.06
CHD2-224ENST00000636410 CD109Q6YHK3 1445 aa8.4□□□□□ -1.06
CHD2-224ENST00000636410 MTUS2Q5JR59 1369 aa8.4□□□□□ -1.06
CHD2-224ENST00000636410 KCNH8Q96L42 1107 aa8.4□□□□□ -1.06
CHD2-224ENST00000636410 CDC42BPBQ9Y5S2 1711 aa8.4□□□□□ -1.07
CHD2-224ENST00000636410 KDM6BO15054 1643 aa8.38□□□□□ -1.07
CHD2-224ENST00000636410 NCOA2Q15596 1464 aa8.37□□□□□ -1.07
CHD2-224ENST00000636410 NEO1Q92859 1461 aa8.37□□□□□ -1.07
CHD2-224ENST00000636410 ARHGAP5Q13017 1502 aa8.36□□□□□ -1.07
CHD2-224ENST00000636410 APLP2Q06481 763 aa8.36□□□□□ -1.07
CHD2-224ENST00000636410 FANCAO15360 1455 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms