RNA–Protein interactions for RNA: ENST00000636292.1

CHRNA7-213, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 4,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-213ENST00000636292 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
CHRNA7-213ENST00000636292 NCAPD3P42695 1498 aa18.91■□□□□ 0.62
CHRNA7-213ENST00000636292 CARMIL2Q6F5E8 1435 aa18.87■□□□□ 0.61
CHRNA7-213ENST00000636292 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
CHRNA7-213ENST00000636292 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.61
CHRNA7-213ENST00000636292 ARID4BQ4LE39 1312 aaPredicted RBP18.82■□□□□ 0.6
CHRNA7-213ENST00000636292 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
CHRNA7-213ENST00000636292 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
CHRNA7-213ENST00000636292 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
CHRNA7-213ENST00000636292 NEFMP07197 916 aa18.75■□□□□ 0.59
CHRNA7-213ENST00000636292 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
CHRNA7-213ENST00000636292 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
CHRNA7-213ENST00000636292 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
CHRNA7-213ENST00000636292 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
CHRNA7-213ENST00000636292 FMN1Q68DA7 1419 aa18.71■□□□□ 0.59
CHRNA7-213ENST00000636292 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
CHRNA7-213ENST00000636292 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
CHRNA7-213ENST00000636292 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
CHRNA7-213ENST00000636292 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
CHRNA7-213ENST00000636292 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
CHRNA7-213ENST00000636292 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
CHRNA7-213ENST00000636292 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
CHRNA7-213ENST00000636292 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
CHRNA7-213ENST00000636292 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.57
CHRNA7-213ENST00000636292 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
CHRNA7-213ENST00000636292 HIRIP3Q9BW71 556 aaPredicted RBP18.6■□□□□ 0.57
CHRNA7-213ENST00000636292 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
CHRNA7-213ENST00000636292 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
CHRNA7-213ENST00000636292 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
CHRNA7-213ENST00000636292 DAXXQ9UER7 740 aaPredicted RBP18.59■□□□□ 0.57
CHRNA7-213ENST00000636292 NESP48681 1621 aa18.58■□□□□ 0.57
CHRNA7-213ENST00000636292 EFCAB2Q5VUJ9 269 aa18.58■□□□□ 0.56
CHRNA7-213ENST00000636292 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
CHRNA7-213ENST00000636292 CFTRP13569 1480 aa18.57■□□□□ 0.56
CHRNA7-213ENST00000636292 IGF1RP08069 1367 aa18.57■□□□□ 0.56
CHRNA7-213ENST00000636292 MLECQ14165 292 aa18.56■□□□□ 0.56
CHRNA7-213ENST00000636292 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
CHRNA7-213ENST00000636292 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
CHRNA7-213ENST00000636292 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
CHRNA7-213ENST00000636292 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
CHRNA7-213ENST00000636292 SIN3AQ96ST3 1273 aa18.52■□□□□ 0.55
CHRNA7-213ENST00000636292 GGT6Q6P531 493 aa18.5■□□□□ 0.55
CHRNA7-213ENST00000636292 PTPRGP23470 1445 aa18.5■□□□□ 0.55
CHRNA7-213ENST00000636292 C14orf37Q86TY3 774 aa18.5■□□□□ 0.55
CHRNA7-213ENST00000636292 KANK1Q14678 1352 aa18.5■□□□□ 0.55
CHRNA7-213ENST00000636292 CYB5RLQ6IPT4 315 aa18.49■□□□□ 0.55
CHRNA7-213ENST00000636292 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
CHRNA7-213ENST00000636292 FAM9BQ8IZU0 186 aa18.48■□□□□ 0.55
CHRNA7-213ENST00000636292 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
CHRNA7-213ENST00000636292 CARD11Q9BXL7 1154 aa18.46■□□□□ 0.54
CHRNA7-213ENST00000636292 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
CHRNA7-213ENST00000636292 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
CHRNA7-213ENST00000636292 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
CHRNA7-213ENST00000636292 HNRNPMP52272 730 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHRNA7-213ENST00000636292 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHRNA7-213ENST00000636292 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
CHRNA7-213ENST00000636292 CCDC18Q5T9S5 1454 aa18.42■□□□□ 0.54
CHRNA7-213ENST00000636292 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
CHRNA7-213ENST00000636292 MRS2Q9HD23 443 aa18.39■□□□□ 0.53
CHRNA7-213ENST00000636292 PKD2Q13563 968 aa18.39■□□□□ 0.53
CHRNA7-213ENST00000636292 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
CHRNA7-213ENST00000636292 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
CHRNA7-213ENST00000636292 MYT1Q01538 1121 aa18.38■□□□□ 0.53
CHRNA7-213ENST00000636292 GRIN2BQ13224 1484 aa18.38■□□□□ 0.53
CHRNA7-213ENST00000636292 WDR43Q15061 677 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRNA7-213ENST00000636292 DCAF11Q8TEB1 546 aa18.38■□□□□ 0.53
CHRNA7-213ENST00000636292 BCL11AQ9H165 835 aa18.37■□□□□ 0.53
CHRNA7-213ENST00000636292 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
CHRNA7-213ENST00000636292 GTF3C3Q9Y5Q9 886 aa18.36■□□□□ 0.53
CHRNA7-213ENST00000636292 POGKQ9P215 609 aa18.36■□□□□ 0.53
CHRNA7-213ENST00000636292 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
CHRNA7-213ENST00000636292 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
CHRNA7-213ENST00000636292 KIF3BO15066 747 aa18.35■□□□□ 0.53
CHRNA7-213ENST00000636292 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
CHRNA7-213ENST00000636292 NUP155O75694 1391 aa18.34■□□□□ 0.53
CHRNA7-213ENST00000636292 FOXD1Q16676 465 aa18.34■□□□□ 0.53
CHRNA7-213ENST00000636292 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
CHRNA7-213ENST00000636292 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
CHRNA7-213ENST00000636292 ZBTB7CA1YPR0 619 aa18.31■□□□□ 0.52
CHRNA7-213ENST00000636292 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
CHRNA7-213ENST00000636292 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
CHRNA7-213ENST00000636292 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
CHRNA7-213ENST00000636292 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
CHRNA7-213ENST00000636292 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
CHRNA7-213ENST00000636292 MIER1Q8N108 512 aa18.26■□□□□ 0.51
CHRNA7-213ENST00000636292 CUX1P39880 1505 aa18.26■□□□□ 0.51
CHRNA7-213ENST00000636292 TIMELESSQ9UNS1 1208 aa18.26■□□□□ 0.51
CHRNA7-213ENST00000636292 WASHC2CQ9Y4E1 1318 aa18.21■□□□□ 0.51
CHRNA7-213ENST00000636292 HAP1P54257 671 aaPredicted RBP18.21■□□□□ 0.51
CHRNA7-213ENST00000636292 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
CHRNA7-213ENST00000636292 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
CHRNA7-213ENST00000636292 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
CHRNA7-213ENST00000636292 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
CHRNA7-213ENST00000636292 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
CHRNA7-213ENST00000636292 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
CHRNA7-213ENST00000636292 FAM69CQ0P6D2 419 aa18.18■□□□□ 0.5
CHRNA7-213ENST00000636292 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
CHRNA7-213ENST00000636292 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHRNA7-213ENST00000636292 A0A0G2JS52 829 aa18.17■□□□□ 0.5
CHRNA7-213ENST00000636292 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms