RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 CFTRP13569 1480 aa6.06□□□□□ -1.44
SCN2A-210ENST00000636135 ANP32BQ92688 251 aaKnown RBP6.05□□□□□ -1.44
SCN2A-210ENST00000636135 TULP1O00294 542 aaPredicted RBP6.05□□□□□ -1.44
SCN2A-210ENST00000636135 NCLP19338 710 aaKnown RBP6.05□□□□□ -1.44
SCN2A-210ENST00000636135 SYNJ1O43426 1573 aa6.05□□□□□ -1.44
SCN2A-210ENST00000636135 KIF27Q86VH2 1401 aa6.04□□□□□ -1.44
SCN2A-210ENST00000636135 SCAF1Q9H7N4 1312 aaKnown RBP6.04□□□□□ -1.44
SCN2A-210ENST00000636135 CUX1P39880 1505 aa6.04□□□□□ -1.44
SCN2A-210ENST00000636135 UBTFP17480 764 aaKnown RBP6.04□□□□□ -1.44
SCN2A-210ENST00000636135 FHAD1B1AJZ9 1412 aa6.03□□□□□ -1.44
SCN2A-210ENST00000636135 AQRO60306 1485 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCN2A-210ENST00000636135 NEUROD1Q13562 356 aa6.03□□□□□ -1.44
SCN2A-210ENST00000636135 DIEXFQ68CQ4 756 aaKnown RBP6.03□□□□□ -1.44
SCN2A-210ENST00000636135 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
SCN2A-210ENST00000636135 MYH9P35579 1960 aaKnown RBP6.02□□□□□ -1.45
SCN2A-210ENST00000636135 VPS8Q8N3P4 1428 aa6.02□□□□□ -1.45
SCN2A-210ENST00000636135 ANP32AP39687 249 aaKnown RBP6.01□□□□□ -1.45
SCN2A-210ENST00000636135 GON4LQ3T8J9 2241 aa6.01□□□□□ -1.45
SCN2A-210ENST00000636135 CEP162Q5TB80 1403 aa6.01□□□□□ -1.45
SCN2A-210ENST00000636135 CFAP65Q6ZU64 1925 aaKnown RBP6□□□□□ -1.45
SCN2A-210ENST00000636135 PBRM1Q86U86 1689 aa5.99□□□□□ -1.45
SCN2A-210ENST00000636135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCN2A-210ENST00000636135 ITSN2Q9NZM3 1697 aa5.97□□□□□ -1.45
SCN2A-210ENST00000636135 CCDC18Q5T9S5 1454 aa5.97□□□□□ -1.45
SCN2A-210ENST00000636135 POLR1AO95602 1720 aaPredicted RBP5.97□□□□□ -1.45
SCN2A-210ENST00000636135 SUPT6HQ7KZ85 1726 aaKnown RBP5.97□□□□□ -1.45
SCN2A-210ENST00000636135 FYCO1Q9BQS8 1478 aa5.97□□□□□ -1.45
SCN2A-210ENST00000636135 GOLGA4Q13439 2230 aaKnown RBP5.97□□□□□ -1.45
SCN2A-210ENST00000636135 ARID3CA6NKF2 412 aa5.96□□□□□ -1.45
SCN2A-210ENST00000636135 CLIP1P30622 1438 aa5.96□□□□□ -1.45
SCN2A-210ENST00000636135 ZBTB7CA1YPR0 619 aa5.96□□□□□ -1.45
SCN2A-210ENST00000636135 AK9Q5TCS8 1911 aa5.96□□□□□ -1.46
SCN2A-210ENST00000636135 TRIM44Q96DX7 344 aaPredicted RBP5.96□□□□□ -1.46
SCN2A-210ENST00000636135 TNNT2P45379 298 aaPredicted RBP5.96□□□□□ -1.46
SCN2A-210ENST00000636135 HECW1Q76N89 1606 aa5.96□□□□□ -1.46
SCN2A-210ENST00000636135 CUX2O14529 1486 aa5.96□□□□□ -1.46
SCN2A-210ENST00000636135 PRXQ9BXM0 1461 aa5.95□□□□□ -1.46
SCN2A-210ENST00000636135 ABCA5Q8WWZ7 1642 aa5.95□□□□□ -1.46
SCN2A-210ENST00000636135 UPF2Q9HAU5 1272 aaKnown RBP5.95□□□□□ -1.46
SCN2A-210ENST00000636135 ABCA10Q8WWZ4 1543 aa5.95□□□□□ -1.46
SCN2A-210ENST00000636135 AMER1Q5JTC6 1135 aaPredicted RBP5.95□□□□□ -1.46
SCN2A-210ENST00000636135 GCC2Q8IWJ2 1684 aa5.94□□□□□ -1.46
SCN2A-210ENST00000636135 NESP48681 1621 aa5.94□□□□□ -1.46
SCN2A-210ENST00000636135 ERICH6BQ5W0A0 696 aa5.94□□□□□ -1.46
SCN2A-210ENST00000636135 ADGBQ8N7X0 1667 aa5.94□□□□□ -1.46
SCN2A-210ENST00000636135 TCHHQ07283 1943 aa5.93□□□□□ -1.46
SCN2A-210ENST00000636135 SAMD9Q5K651 1589 aa5.93□□□□□ -1.46
SCN2A-210ENST00000636135 ANP32CO43423 234 aa5.93□□□□□ -1.46
SCN2A-210ENST00000636135 TIAM1Q13009 1591 aa5.93□□□□□ -1.46
SCN2A-210ENST00000636135 CSRNP3Q8WYN3 585 aa5.93□□□□□ -1.46
SCN2A-210ENST00000636135 FMN1Q68DA7 1419 aa5.93□□□□□ -1.46
SCN2A-210ENST00000636135 RAPGEF2Q9Y4G8 1499 aa5.92□□□□□ -1.46
SCN2A-210ENST00000636135 PDS5BQ9NTI5 1447 aa5.92□□□□□ -1.46
SCN2A-210ENST00000636135 EHBP1L1Q8N3D4 1523 aa5.92□□□□□ -1.46
SCN2A-210ENST00000636135 FBLN2P98095 1184 aa5.92□□□□□ -1.46
SCN2A-210ENST00000636135 MYH11P35749 1972 aa5.91□□□□□ -1.46
SCN2A-210ENST00000636135 TIMELESSQ9UNS1 1208 aa5.91□□□□□ -1.46
SCN2A-210ENST00000636135 CADPSQ9ULU8 1353 aa5.9□□□□□ -1.46
SCN2A-210ENST00000636135 CFAP44Q96MT7 982 aa5.9□□□□□ -1.46
SCN2A-210ENST00000636135 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.9□□□□□ -1.47
SCN2A-210ENST00000636135 AKNAQ7Z591 1439 aa5.89□□□□□ -1.47
SCN2A-210ENST00000636135 ZNF326Q5BKZ1 582 aaKnown RBP5.89□□□□□ -1.47
SCN2A-210ENST00000636135 DDRGK1Q96HY6 314 aa5.89□□□□□ -1.47
SCN2A-210ENST00000636135 ZBTB47Q9UFB7 747 aaPredicted RBP5.89□□□□□ -1.47
SCN2A-210ENST00000636135 CROCCQ5TZA2 2017 aa5.89□□□□□ -1.47
SCN2A-210ENST00000636135 RRBP1Q9P2E9 1410 aaKnown RBP5.89□□□□□ -1.47
SCN2A-210ENST00000636135 ADCY10Q96PN6 1610 aa5.88□□□□□ -1.47
SCN2A-210ENST00000636135 PTMSP20962 102 aa5.88□□□□□ -1.47
SCN2A-210ENST00000636135 TAOK2Q9UL54 1235 aa5.88□□□□□ -1.47
SCN2A-210ENST00000636135 FGD5Q6ZNL6 1462 aa5.88□□□□□ -1.47
SCN2A-210ENST00000636135 ERCC6Q03468 1493 aa5.87□□□□□ -1.47
SCN2A-210ENST00000636135 MICAL3Q7RTP6 2002 aa5.87□□□□□ -1.47
SCN2A-210ENST00000636135 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.86□□□□□ -1.47
SCN2A-210ENST00000636135 ANKRD12Q6UB98 2062 aa5.85□□□□□ -1.47
SCN2A-210ENST00000636135 CASKIN1Q8WXD9 1431 aa5.85□□□□□ -1.47
SCN2A-210ENST00000636135 IQGAP2Q13576 1575 aa5.85□□□□□ -1.47
SCN2A-210ENST00000636135 WDR62O43379 1518 aa5.85□□□□□ -1.47
SCN2A-210ENST00000636135 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
SCN2A-210ENST00000636135 FANCD2Q9BXW9 1451 aa5.85□□□□□ -1.47
SCN2A-210ENST00000636135 BECN1Q14457 450 aa5.84□□□□□ -1.47
SCN2A-210ENST00000636135 ADAMTS12P58397 1594 aa5.84□□□□□ -1.47
SCN2A-210ENST00000636135 CROCC2H7BZ55 1655 aa5.84□□□□□ -1.47
SCN2A-210ENST00000636135 CHMP4BQ9H444 224 aaKnown RBP5.84□□□□□ -1.47
SCN2A-210ENST00000636135 TOPBP1Q92547 1522 aa5.83□□□□□ -1.48
SCN2A-210ENST00000636135 ARHGAP35Q9NRY4 1499 aa5.83□□□□□ -1.48
SCN2A-210ENST00000636135 CANXP27824 592 aaKnown RBP5.83□□□□□ -1.48
SCN2A-210ENST00000636135 ARXQ96QS3 562 aa5.83□□□□□ -1.48
SCN2A-210ENST00000636135 IFT140Q96RY7 1462 aa5.83□□□□□ -1.48
SCN2A-210ENST00000636135 TARBP1Q13395 1621 aaKnown RBP5.82□□□□□ -1.48
SCN2A-210ENST00000636135 MRC2Q9UBG0 1479 aa5.82□□□□□ -1.48
SCN2A-210ENST00000636135 MAGI1Q96QZ7 1491 aaPredicted RBP5.82□□□□□ -1.48
SCN2A-210ENST00000636135 NPM2Q86SE8 214 aaKnown RBP5.81□□□□□ -1.48
SCN2A-210ENST00000636135 ARAP1Q96P48 1450 aa5.81□□□□□ -1.48
SCN2A-210ENST00000636135 ANO8Q9HCE9 1232 aaPredicted RBP5.81□□□□□ -1.48
SCN2A-210ENST00000636135 UGGT2Q9NYU1 1516 aa5.8□□□□□ -1.48
SCN2A-210ENST00000636135 GOLGA6L22H0YM25 854 aa5.8□□□□□ -1.48
SCN2A-210ENST00000636135 PPM1GO15355 546 aaPredicted RBP5.8□□□□□ -1.48
SCN2A-210ENST00000636135 GTF3C3Q9Y5Q9 886 aa5.8□□□□□ -1.48
SCN2A-210ENST00000636135 PCF11O94913 1555 aaKnown RBP5.8□□□□□ -1.48
SCN2A-210ENST00000636135 TPRNQ4KMQ1 711 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms