RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-223ENST00000636058 CEP170Q5SW79 1584 aa15.44■□□□□ 0.06
CACNA1A-223ENST00000636058 NUP160Q12769 1436 aa15.43■□□□□ 0.06
CACNA1A-223ENST00000636058 FBLN2P98095 1184 aa15.42■□□□□ 0.06
CACNA1A-223ENST00000636058 KIAA0586Q9BVV6 1533 aa15.4■□□□□ 0.06
CACNA1A-223ENST00000636058 IQGAP2Q13576 1575 aa15.4■□□□□ 0.06
CACNA1A-223ENST00000636058 CLIP1P30622 1438 aa15.38■□□□□ 0.05
CACNA1A-223ENST00000636058 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.05
CACNA1A-223ENST00000636058 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.04
CACNA1A-223ENST00000636058 UGGT2Q9NYU1 1516 aa15.33■□□□□ 0.04
CACNA1A-223ENST00000636058 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
CACNA1A-223ENST00000636058 RANGAP1P46060 587 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-223ENST00000636058 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
CACNA1A-223ENST00000636058 ARAP1Q96P48 1450 aa15.29■□□□□ 0.04
CACNA1A-223ENST00000636058 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
CACNA1A-223ENST00000636058 DISP1Q96F81 1524 aa15.26■□□□□ 0.03
CACNA1A-223ENST00000636058 KIAA0556O60303 1618 aa15.25■□□□□ 0.03
CACNA1A-223ENST00000636058 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
CACNA1A-223ENST00000636058 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
CACNA1A-223ENST00000636058 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
CACNA1A-223ENST00000636058 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
CACNA1A-223ENST00000636058 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
CACNA1A-223ENST00000636058 CARMIL2Q6F5E8 1435 aa15.19■□□□□ 0.02
CACNA1A-223ENST00000636058 PRG4Q92954 1404 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-223ENST00000636058 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
CACNA1A-223ENST00000636058 ERCC6L2Q5T890 1561 aa15.15■□□□□ 0.02
CACNA1A-223ENST00000636058 PCF11O94913 1555 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-223ENST00000636058 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
CACNA1A-223ENST00000636058 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
CACNA1A-223ENST00000636058 PTPRGP23470 1445 aa15.07■□□□□ 0
CACNA1A-223ENST00000636058 HECW1Q76N89 1606 aa15.06■□□□□ 0
CACNA1A-223ENST00000636058 RAPGEF6Q8TEU7 1601 aa15.06■□□□□ 0
CACNA1A-223ENST00000636058 ABCA8O94911 1581 aa15.05■□□□□ -0
CACNA1A-223ENST00000636058 MAP3K1Q13233 1512 aa15.04■□□□□ -0
CACNA1A-223ENST00000636058 PLB1Q6P1J6 1458 aa15.04■□□□□ -0
CACNA1A-223ENST00000636058 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
CACNA1A-223ENST00000636058 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
CACNA1A-223ENST00000636058 TTBK1Q5TCY1 1321 aaPredicted RBP15.02■□□□□ -0
CACNA1A-223ENST00000636058 TIAM1Q13009 1591 aa15.02□□□□□ -0.01
CACNA1A-223ENST00000636058 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
CACNA1A-223ENST00000636058 NUP153P49790 1475 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-223ENST00000636058 APLP2Q06481 763 aa15□□□□□ -0.01
CACNA1A-223ENST00000636058 UACAQ9BZF9 1416 aa15□□□□□ -0.01
CACNA1A-223ENST00000636058 EPRSP07814 1512 aaKnown RBP14.99□□□□□ -0.01
CACNA1A-223ENST00000636058 CCDC18Q5T9S5 1454 aa14.99□□□□□ -0.01
CACNA1A-223ENST00000636058 ATP1B4Q9UN42 357 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-223ENST00000636058 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
CACNA1A-223ENST00000636058 UHRF1BP1LA0JNW5 1464 aa14.96□□□□□ -0.01
CACNA1A-223ENST00000636058 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.01
CACNA1A-223ENST00000636058 RIMBP3BA6NNM3 1639 aa14.96□□□□□ -0.01
CACNA1A-223ENST00000636058 RIMBP3Q9UFD9 1639 aa14.96□□□□□ -0.01
CACNA1A-223ENST00000636058 CDK13Q14004 1512 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-223ENST00000636058 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
CACNA1A-223ENST00000636058 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-223ENST00000636058 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
CACNA1A-223ENST00000636058 ATP10BO94823 1461 aa14.91□□□□□ -0.02
CACNA1A-223ENST00000636058 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-223ENST00000636058 MAGI3Q5TCQ9 1506 aa14.9□□□□□ -0.02
CACNA1A-223ENST00000636058 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
CACNA1A-223ENST00000636058 KDM5BQ9UGL1 1544 aa14.89□□□□□ -0.03
CACNA1A-223ENST00000636058 ARID3CA6NKF2 412 aa14.89□□□□□ -0.03
CACNA1A-223ENST00000636058 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-223ENST00000636058 MTUS2Q5JR59 1369 aa14.86□□□□□ -0.03
CACNA1A-223ENST00000636058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-223ENST00000636058 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
CACNA1A-223ENST00000636058 CDK11AQ9UQ88 783 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-223ENST00000636058 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.03
CACNA1A-223ENST00000636058 TROQ12816 1431 aaPredicted RBP14.83□□□□□ -0.04
CACNA1A-223ENST00000636058 CYB5RLQ6IPT4 315 aa14.81□□□□□ -0.04
CACNA1A-223ENST00000636058 PLEKHD1A6NEE1 506 aa14.8□□□□□ -0.04
CACNA1A-223ENST00000636058 NCOA2Q15596 1464 aa14.8□□□□□ -0.04
CACNA1A-223ENST00000636058 KIF14Q15058 1648 aa14.77□□□□□ -0.04
CACNA1A-223ENST00000636058 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.04
CACNA1A-223ENST00000636058 TRIM26Q12899 539 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-223ENST00000636058 WDR7Q9Y4E6 1490 aa14.75□□□□□ -0.05
CACNA1A-223ENST00000636058 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
CACNA1A-223ENST00000636058 ASXL2Q76L83 1435 aa14.74□□□□□ -0.05
CACNA1A-223ENST00000636058 MAPKBP1O60336 1514 aa14.73□□□□□ -0.05
CACNA1A-223ENST00000636058 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
CACNA1A-223ENST00000636058 ABCC10Q5T3U5 1492 aa14.73□□□□□ -0.05
CACNA1A-223ENST00000636058 MYOM3Q5VTT5 1437 aa14.73□□□□□ -0.05
CACNA1A-223ENST00000636058 RRBP1Q9P2E9 1410 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-223ENST00000636058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.71□□□□□ -0.06
CACNA1A-223ENST00000636058 ITSN2Q9NZM3 1697 aa14.7□□□□□ -0.06
CACNA1A-223ENST00000636058 TTC37Q6PGP7 1564 aa14.69□□□□□ -0.06
CACNA1A-223ENST00000636058 FGD6Q6ZV73 1430 aa14.69□□□□□ -0.06
CACNA1A-223ENST00000636058 CCNB3Q8WWL7 1395 aa14.69□□□□□ -0.06
CACNA1A-223ENST00000636058 CDC42BPAQ5VT25 1732 aa14.69□□□□□ -0.06
CACNA1A-223ENST00000636058 GPATCH8Q9UKJ3 1502 aaKnown RBP14.68□□□□□ -0.06
CACNA1A-223ENST00000636058 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
CACNA1A-223ENST00000636058 ABCA9Q8IUA7 1624 aa14.66□□□□□ -0.06
CACNA1A-223ENST00000636058 KCNH8Q96L42 1107 aa14.66□□□□□ -0.06
CACNA1A-223ENST00000636058 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
CACNA1A-223ENST00000636058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
CACNA1A-223ENST00000636058 MYO5CQ9NQX4 1742 aa14.65□□□□□ -0.06
CACNA1A-223ENST00000636058 PTPN23Q9H3S7 1636 aa14.65□□□□□ -0.06
CACNA1A-223ENST00000636058 TCOF1Q13428 1488 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-223ENST00000636058 PCGF6Q9BYE7 350 aa14.64□□□□□ -0.07
CACNA1A-223ENST00000636058 CDC42BPBQ9Y5S2 1711 aa14.63□□□□□ -0.07
CACNA1A-223ENST00000636058 ARAP3Q8WWN8 1544 aa14.61□□□□□ -0.07
CACNA1A-223ENST00000636058 GLI2P10070 1586 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms