RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 FHAD1B1AJZ9 1412 aa11.8□□□□□ -0.52
SSRP1-205ENST00000635721 KIF21BO75037 1637 aa11.79□□□□□ -0.52
SSRP1-205ENST00000635721 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
SSRP1-205ENST00000635721 SYNJ2O15056 1496 aa11.78□□□□□ -0.52
SSRP1-205ENST00000635721 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
SSRP1-205ENST00000635721 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
SSRP1-205ENST00000635721 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
SSRP1-205ENST00000635721 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
SSRP1-205ENST00000635721 ACIN1Q9UKV3 1341 aaKnown RBP11.72□□□□□ -0.53
SSRP1-205ENST00000635721 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.54
SSRP1-205ENST00000635721 RANGAP1P46060 587 aaPredicted RBP11.7□□□□□ -0.54
SSRP1-205ENST00000635721 NUP160Q12769 1436 aa11.69□□□□□ -0.54
SSRP1-205ENST00000635721 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
SSRP1-205ENST00000635721 TNIKQ9UKE5 1360 aa11.66□□□□□ -0.54
SSRP1-205ENST00000635721 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
SSRP1-205ENST00000635721 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
SSRP1-205ENST00000635721 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
SSRP1-205ENST00000635721 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
SSRP1-205ENST00000635721 P3H3Q8IVL6 736 aa11.62□□□□□ -0.55
SSRP1-205ENST00000635721 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
SSRP1-205ENST00000635721 ERCC6L2Q5T890 1561 aa11.6□□□□□ -0.55
SSRP1-205ENST00000635721 SHROOM2Q13796 1616 aa11.59□□□□□ -0.55
SSRP1-205ENST00000635721 UGGT2Q9NYU1 1516 aa11.57□□□□□ -0.56
SSRP1-205ENST00000635721 CEP162Q5TB80 1403 aa11.57□□□□□ -0.56
SSRP1-205ENST00000635721 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
SSRP1-205ENST00000635721 DISP1Q96F81 1524 aa11.56□□□□□ -0.56
SSRP1-205ENST00000635721 PRG4Q92954 1404 aaPredicted RBP11.56□□□□□ -0.56
SSRP1-205ENST00000635721 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
SSRP1-205ENST00000635721 SAMD9Q5K651 1589 aa11.54□□□□□ -0.56
SSRP1-205ENST00000635721 CLIP1P30622 1438 aa11.54□□□□□ -0.56
SSRP1-205ENST00000635721 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
SSRP1-205ENST00000635721 FHOD3Q2V2M9 1422 aa11.53□□□□□ -0.56
SSRP1-205ENST00000635721 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
SSRP1-205ENST00000635721 CLSPNQ9HAW4 1339 aa11.52□□□□□ -0.57
SSRP1-205ENST00000635721 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
SSRP1-205ENST00000635721 DIEXFQ68CQ4 756 aaKnown RBP11.51□□□□□ -0.57
SSRP1-205ENST00000635721 RIMBP3CA6NJZ7 1639 aa11.49□□□□□ -0.57
SSRP1-205ENST00000635721 RIMBP3BA6NNM3 1639 aa11.49□□□□□ -0.57
SSRP1-205ENST00000635721 RIMBP3Q9UFD9 1639 aa11.49□□□□□ -0.57
SSRP1-205ENST00000635721 EFCAB5A4FU69 1503 aa11.48□□□□□ -0.57
SSRP1-205ENST00000635721 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
SSRP1-205ENST00000635721 CARMIL2Q6F5E8 1435 aa11.47□□□□□ -0.57
SSRP1-205ENST00000635721 CCER1Q8TC90 406 aaPredicted RBP11.45□□□□□ -0.58
SSRP1-205ENST00000635721 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
SSRP1-205ENST00000635721 PTPRGP23470 1445 aa11.43□□□□□ -0.58
SSRP1-205ENST00000635721 LRRIQ1Q96JM4 1722 aa11.43□□□□□ -0.58
SSRP1-205ENST00000635721 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
SSRP1-205ENST00000635721 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
SSRP1-205ENST00000635721 PLB1Q6P1J6 1458 aa11.42□□□□□ -0.58
SSRP1-205ENST00000635721 ARID3CA6NKF2 412 aa11.41□□□□□ -0.58
SSRP1-205ENST00000635721 CYB5RLQ6IPT4 315 aa11.41□□□□□ -0.58
SSRP1-205ENST00000635721 ATP1B4Q9UN42 357 aaPredicted RBP11.41□□□□□ -0.58
SSRP1-205ENST00000635721 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
SSRP1-205ENST00000635721 RAPGEF6Q8TEU7 1601 aa11.39□□□□□ -0.59
SSRP1-205ENST00000635721 ABCA8O94911 1581 aa11.39□□□□□ -0.59
SSRP1-205ENST00000635721 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
SSRP1-205ENST00000635721 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
SSRP1-205ENST00000635721 UACAQ9BZF9 1416 aa11.36□□□□□ -0.59
SSRP1-205ENST00000635721 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
SSRP1-205ENST00000635721 CASKIN1Q8WXD9 1431 aa11.35□□□□□ -0.59
SSRP1-205ENST00000635721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
SSRP1-205ENST00000635721 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
SSRP1-205ENST00000635721 CDK13Q14004 1512 aaKnown RBP11.34□□□□□ -0.59
SSRP1-205ENST00000635721 ABCC2Q92887 1545 aa11.33□□□□□ -0.6
SSRP1-205ENST00000635721 ATP10BO94823 1461 aa11.32□□□□□ -0.6
SSRP1-205ENST00000635721 HECW1Q76N89 1606 aa11.32□□□□□ -0.6
SSRP1-205ENST00000635721 FYCO1Q9BQS8 1478 aa11.32□□□□□ -0.6
SSRP1-205ENST00000635721 ZCCHC11Q5TAX3 1644 aaKnown RBP11.31□□□□□ -0.6
SSRP1-205ENST00000635721 EPRSP07814 1512 aaKnown RBP11.31□□□□□ -0.6
SSRP1-205ENST00000635721 KANK4Q5T7N3 995 aaPredicted RBP11.31□□□□□ -0.6
SSRP1-205ENST00000635721 UHRF1BP1LA0JNW5 1464 aa11.31□□□□□ -0.6
SSRP1-205ENST00000635721 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
SSRP1-205ENST00000635721 MAGI3Q5TCQ9 1506 aa11.29□□□□□ -0.6
SSRP1-205ENST00000635721 KDM5BQ9UGL1 1544 aa11.28□□□□□ -0.6
SSRP1-205ENST00000635721 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
SSRP1-205ENST00000635721 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.6
SSRP1-205ENST00000635721 APLP2Q06481 763 aa11.25□□□□□ -0.61
SSRP1-205ENST00000635721 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
SSRP1-205ENST00000635721 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
SSRP1-205ENST00000635721 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
SSRP1-205ENST00000635721 PLEKHD1A6NEE1 506 aa11.22□□□□□ -0.61
SSRP1-205ENST00000635721 MAP3K1Q13233 1512 aa11.22□□□□□ -0.61
SSRP1-205ENST00000635721 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
SSRP1-205ENST00000635721 KIF14Q15058 1648 aa11.21□□□□□ -0.61
SSRP1-205ENST00000635721 ASXL2Q76L83 1435 aa11.21□□□□□ -0.61
SSRP1-205ENST00000635721 MTUS2Q5JR59 1369 aa11.19□□□□□ -0.62
SSRP1-205ENST00000635721 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
SSRP1-205ENST00000635721 CDK11AQ9UQ88 783 aaPredicted RBP11.18□□□□□ -0.62
SSRP1-205ENST00000635721 EHBP1L1Q8N3D4 1523 aa11.17□□□□□ -0.62
SSRP1-205ENST00000635721 WDR7Q9Y4E6 1490 aa11.17□□□□□ -0.62
SSRP1-205ENST00000635721 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
SSRP1-205ENST00000635721 SUPT6HQ7KZ85 1726 aaKnown RBP11.16□□□□□ -0.62
SSRP1-205ENST00000635721 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
SSRP1-205ENST00000635721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.15□□□□□ -0.62
SSRP1-205ENST00000635721 MIER1Q8N108 512 aa11.15□□□□□ -0.62
SSRP1-205ENST00000635721 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
SSRP1-205ENST00000635721 ABCC10Q5T3U5 1492 aa11.14□□□□□ -0.63
SSRP1-205ENST00000635721 TTC37Q6PGP7 1564 aa11.14□□□□□ -0.63
SSRP1-205ENST00000635721 CDC42BPAQ5VT25 1732 aa11.14□□□□□ -0.63
SSRP1-205ENST00000635721 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms