RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 DNAJC5Q9H3Z4 198 aa12.19□□□□□ -0.46
PATJ-216ENST00000635214 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
PATJ-216ENST00000635214 ANP32CO43423 234 aa12.18□□□□□ -0.46
PATJ-216ENST00000635214 FGD5Q6ZNL6 1462 aa12.16□□□□□ -0.46
PATJ-216ENST00000635214 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
PATJ-216ENST00000635214 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
PATJ-216ENST00000635214 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
PATJ-216ENST00000635214 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
PATJ-216ENST00000635214 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
PATJ-216ENST00000635214 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
PATJ-216ENST00000635214 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
PATJ-216ENST00000635214 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
PATJ-216ENST00000635214 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
PATJ-216ENST00000635214 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
PATJ-216ENST00000635214 ANP32BQ92688 251 aaKnown RBP12.06□□□□□ -0.48
PATJ-216ENST00000635214 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
PATJ-216ENST00000635214 TOP2BQ02880 1626 aa12.04□□□□□ -0.48
PATJ-216ENST00000635214 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
PATJ-216ENST00000635214 ERICH3Q5RHP9 1530 aa12.03□□□□□ -0.48
PATJ-216ENST00000635214 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.49
PATJ-216ENST00000635214 SNAPC4Q5SXM2 1469 aa12.01□□□□□ -0.49
PATJ-216ENST00000635214 CUX1P39880 1505 aa12□□□□□ -0.49
PATJ-216ENST00000635214 CARMIL1Q5VZK9 1371 aa12□□□□□ -0.49
PATJ-216ENST00000635214 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
PATJ-216ENST00000635214 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
PATJ-216ENST00000635214 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
PATJ-216ENST00000635214 BIVM-ERCC5R4GMW8 1640 aa11.97□□□□□ -0.49
PATJ-216ENST00000635214 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
PATJ-216ENST00000635214 TNIKQ9UKE5 1360 aa11.96□□□□□ -0.49
PATJ-216ENST00000635214 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
PATJ-216ENST00000635214 NEUROD1Q13562 356 aa11.96□□□□□ -0.49
PATJ-216ENST00000635214 FKBP8Q14318 412 aa11.95□□□□□ -0.5
PATJ-216ENST00000635214 CUL7Q14999 1698 aa11.95□□□□□ -0.5
PATJ-216ENST00000635214 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
PATJ-216ENST00000635214 CANXP27824 592 aaKnown RBP11.92□□□□□ -0.5
PATJ-216ENST00000635214 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
PATJ-216ENST00000635214 CLIP1P30622 1438 aa11.92□□□□□ -0.5
PATJ-216ENST00000635214 TRIM52Q96A61 297 aa11.91□□□□□ -0.5
PATJ-216ENST00000635214 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
PATJ-216ENST00000635214 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
PATJ-216ENST00000635214 CYB5RLQ6IPT4 315 aa11.89□□□□□ -0.51
PATJ-216ENST00000635214 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
PATJ-216ENST00000635214 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
PATJ-216ENST00000635214 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
PATJ-216ENST00000635214 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
PATJ-216ENST00000635214 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
PATJ-216ENST00000635214 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
PATJ-216ENST00000635214 ANP32EQ9BTT0 268 aa11.85□□□□□ -0.51
PATJ-216ENST00000635214 PTPRGP23470 1445 aa11.84□□□□□ -0.51
PATJ-216ENST00000635214 NBR1Q14596 966 aa11.84□□□□□ -0.51
PATJ-216ENST00000635214 HSP90AA1P07900 732 aaKnown RBP11.83□□□□□ -0.52
PATJ-216ENST00000635214 ADAMTS12P58397 1594 aa11.82□□□□□ -0.52
PATJ-216ENST00000635214 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
PATJ-216ENST00000635214 IGF1RP08069 1367 aa11.81□□□□□ -0.52
PATJ-216ENST00000635214 PRG4Q92954 1404 aaPredicted RBP11.81□□□□□ -0.52
PATJ-216ENST00000635214 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
PATJ-216ENST00000635214 NEFMP07197 916 aa11.78□□□□□ -0.52
PATJ-216ENST00000635214 NUP160Q12769 1436 aa11.78□□□□□ -0.52
PATJ-216ENST00000635214 HNRNPUQ00839 825 aaKnown RBP eCLIP11.78□□□□□ -0.52
PATJ-216ENST00000635214 CCDC136Q96JN2 1154 aa11.78□□□□□ -0.52
PATJ-216ENST00000635214 PLEKHD1A6NEE1 506 aa11.77□□□□□ -0.53
PATJ-216ENST00000635214 TNNT2P45379 298 aaPredicted RBP11.77□□□□□ -0.53
PATJ-216ENST00000635214 ZNF326Q5BKZ1 582 aaKnown RBP11.77□□□□□ -0.53
PATJ-216ENST00000635214 ARHGEF11O15085 1522 aa11.74□□□□□ -0.53
PATJ-216ENST00000635214 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
PATJ-216ENST00000635214 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
PATJ-216ENST00000635214 MTUS2Q5JR59 1369 aa11.72□□□□□ -0.53
PATJ-216ENST00000635214 IQGAP2Q13576 1575 aa11.72□□□□□ -0.53
PATJ-216ENST00000635214 CHD1O14646 1710 aa11.72□□□□□ -0.53
PATJ-216ENST00000635214 PLB1Q6P1J6 1458 aa11.72□□□□□ -0.53
PATJ-216ENST00000635214 FMN1Q68DA7 1419 aa11.71□□□□□ -0.53
PATJ-216ENST00000635214 TONSLQ96HA7 1378 aa11.7□□□□□ -0.54
PATJ-216ENST00000635214 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
PATJ-216ENST00000635214 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
PATJ-216ENST00000635214 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
PATJ-216ENST00000635214 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
PATJ-216ENST00000635214 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
PATJ-216ENST00000635214 ESF1Q9H501 851 aaKnown RBP11.67□□□□□ -0.54
PATJ-216ENST00000635214 TEX14Q8IWB6 1497 aa11.67□□□□□ -0.54
PATJ-216ENST00000635214 EFCAB5A4FU69 1503 aa11.67□□□□□ -0.54
PATJ-216ENST00000635214 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
PATJ-216ENST00000635214 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
PATJ-216ENST00000635214 CLASP1Q7Z460 1538 aa11.66□□□□□ -0.54
PATJ-216ENST00000635214 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
PATJ-216ENST00000635214 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
PATJ-216ENST00000635214 VPS8Q8N3P4 1428 aa11.65□□□□□ -0.54
PATJ-216ENST00000635214 FAM69CQ0P6D2 419 aa11.65□□□□□ -0.54
PATJ-216ENST00000635214 BECN1Q14457 450 aa11.65□□□□□ -0.54
PATJ-216ENST00000635214 FAM9BQ8IZU0 186 aa11.64□□□□□ -0.55
PATJ-216ENST00000635214 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
PATJ-216ENST00000635214 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
PATJ-216ENST00000635214 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
PATJ-216ENST00000635214 CEP170Q5SW79 1584 aa11.63□□□□□ -0.55
PATJ-216ENST00000635214 ARXQ96QS3 562 aa11.62□□□□□ -0.55
PATJ-216ENST00000635214 MIER1Q8N108 512 aa11.62□□□□□ -0.55
PATJ-216ENST00000635214 TIMELESSQ9UNS1 1208 aa11.61□□□□□ -0.55
PATJ-216ENST00000635214 UGGT2Q9NYU1 1516 aa11.6□□□□□ -0.55
PATJ-216ENST00000635214 GOLGA6L22H0YM25 854 aa11.59□□□□□ -0.55
PATJ-216ENST00000635214 KIF21BO75037 1637 aa11.59□□□□□ -0.55
PATJ-216ENST00000635214 PRXQ9BXM0 1461 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms