RNA–Protein interactions for RNA: ENST00000635084.1

ATRIP-206, Transcript of ATR interacting protein, humanhuman

TSL 4

Gene ATRIP, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-206ENST00000635084 NUP160Q12769 1436 aa15.75■□□□□ 0.11
ATRIP-206ENST00000635084 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
ATRIP-206ENST00000635084 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
ATRIP-206ENST00000635084 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
ATRIP-206ENST00000635084 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
ATRIP-206ENST00000635084 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
ATRIP-206ENST00000635084 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
ATRIP-206ENST00000635084 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
ATRIP-206ENST00000635084 EEA1Q15075 1411 aa15.6■□□□□ 0.09
ATRIP-206ENST00000635084 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
ATRIP-206ENST00000635084 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
ATRIP-206ENST00000635084 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
ATRIP-206ENST00000635084 ERCC6L2Q5T890 1561 aa15.59■□□□□ 0.09
ATRIP-206ENST00000635084 CTTNBP2Q8WZ74 1663 aa15.55■□□□□ 0.08
ATRIP-206ENST00000635084 IQGAP2Q13576 1575 aa15.55■□□□□ 0.08
ATRIP-206ENST00000635084 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
ATRIP-206ENST00000635084 PRG4Q92954 1404 aaPredicted RBP15.53■□□□□ 0.08
ATRIP-206ENST00000635084 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
ATRIP-206ENST00000635084 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
ATRIP-206ENST00000635084 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
ATRIP-206ENST00000635084 KIF21BO75037 1637 aa15.49■□□□□ 0.07
ATRIP-206ENST00000635084 UGGT2Q9NYU1 1516 aa15.46■□□□□ 0.07
ATRIP-206ENST00000635084 DISP1Q96F81 1524 aa15.43■□□□□ 0.06
ATRIP-206ENST00000635084 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
ATRIP-206ENST00000635084 KIAA0556O60303 1618 aa15.4■□□□□ 0.06
ATRIP-206ENST00000635084 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
ATRIP-206ENST00000635084 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
ATRIP-206ENST00000635084 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
ATRIP-206ENST00000635084 PTPRGP23470 1445 aa15.34■□□□□ 0.05
ATRIP-206ENST00000635084 SAMD9Q5K651 1589 aa15.33■□□□□ 0.05
ATRIP-206ENST00000635084 TTBK1Q5TCY1 1321 aaPredicted RBP15.27■□□□□ 0.04
ATRIP-206ENST00000635084 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
ATRIP-206ENST00000635084 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
ATRIP-206ENST00000635084 ABCC2Q92887 1545 aa15.26■□□□□ 0.03
ATRIP-206ENST00000635084 UHRF1BP1LA0JNW5 1464 aa15.26■□□□□ 0.03
ATRIP-206ENST00000635084 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
ATRIP-206ENST00000635084 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
ATRIP-206ENST00000635084 ABCA8O94911 1581 aa15.23■□□□□ 0.03
ATRIP-206ENST00000635084 MAPKBP1O60336 1514 aa15.22■□□□□ 0.03
ATRIP-206ENST00000635084 PLB1Q6P1J6 1458 aa15.22■□□□□ 0.03
ATRIP-206ENST00000635084 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
ATRIP-206ENST00000635084 RANGAP1P46060 587 aaPredicted RBP15.2■□□□□ 0.02
ATRIP-206ENST00000635084 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
ATRIP-206ENST00000635084 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
ATRIP-206ENST00000635084 ZCCHC11Q5TAX3 1644 aaKnown RBP15.19■□□□□ 0.02
ATRIP-206ENST00000635084 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
ATRIP-206ENST00000635084 KIF13AQ9H1H9 1805 aa15.18■□□□□ 0.02
ATRIP-206ENST00000635084 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
ATRIP-206ENST00000635084 RAPGEF6Q8TEU7 1601 aa15.17■□□□□ 0.02
ATRIP-206ENST00000635084 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
ATRIP-206ENST00000635084 DIP2BQ9P265 1576 aa15.14■□□□□ 0.01
ATRIP-206ENST00000635084 ABCC10Q5T3U5 1492 aa15.12■□□□□ 0.01
ATRIP-206ENST00000635084 ASXL2Q76L83 1435 aa15.11■□□□□ 0.01
ATRIP-206ENST00000635084 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
ATRIP-206ENST00000635084 NUP153P49790 1475 aaKnown RBP15.08■□□□□ 0.01
ATRIP-206ENST00000635084 ATP10BO94823 1461 aa15.08■□□□□ 0
ATRIP-206ENST00000635084 CLIP1P30622 1438 aa15.07■□□□□ 0
ATRIP-206ENST00000635084 FMN1Q68DA7 1419 aa15.07■□□□□ 0
ATRIP-206ENST00000635084 WDR7Q9Y4E6 1490 aa15.06■□□□□ 0
ATRIP-206ENST00000635084 GLI2P10070 1586 aa15.06■□□□□ 0
ATRIP-206ENST00000635084 HECW1Q76N89 1606 aa15.04■□□□□ -0
ATRIP-206ENST00000635084 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
ATRIP-206ENST00000635084 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
ATRIP-206ENST00000635084 ARID3CA6NKF2 412 aa15.03■□□□□ -0
ATRIP-206ENST00000635084 CEP162Q5TB80 1403 aa15.02■□□□□ -0
ATRIP-206ENST00000635084 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
ATRIP-206ENST00000635084 PCF11O94913 1555 aaKnown RBP15.02□□□□□ -0.01
ATRIP-206ENST00000635084 TSPOAP1O95153 1857 aa15.01□□□□□ -0.01
ATRIP-206ENST00000635084 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
ATRIP-206ENST00000635084 MAP3K4Q9Y6R4 1608 aa15□□□□□ -0.01
ATRIP-206ENST00000635084 CDK13Q14004 1512 aaKnown RBP14.99□□□□□ -0.01
ATRIP-206ENST00000635084 PPRC1Q5VV67 1664 aaKnown RBP14.99□□□□□ -0.01
ATRIP-206ENST00000635084 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
ATRIP-206ENST00000635084 CFAP43Q8NDM7 1665 aa14.97□□□□□ -0.01
ATRIP-206ENST00000635084 CASKIN1Q8WXD9 1431 aa14.97□□□□□ -0.01
ATRIP-206ENST00000635084 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
ATRIP-206ENST00000635084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.95□□□□□ -0.02
ATRIP-206ENST00000635084 HNRNPUL2Q1KMD3 747 aaKnown RBP14.95□□□□□ -0.02
ATRIP-206ENST00000635084 ABCA9Q8IUA7 1624 aa14.94□□□□□ -0.02
ATRIP-206ENST00000635084 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
ATRIP-206ENST00000635084 ATP1B4Q9UN42 357 aaPredicted RBP14.92□□□□□ -0.02
ATRIP-206ENST00000635084 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
ATRIP-206ENST00000635084 PLEKHD1A6NEE1 506 aa14.89□□□□□ -0.03
ATRIP-206ENST00000635084 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
ATRIP-206ENST00000635084 TEX14Q8IWB6 1497 aa14.89□□□□□ -0.03
ATRIP-206ENST00000635084 MAGI3Q5TCQ9 1506 aa14.88□□□□□ -0.03
ATRIP-206ENST00000635084 TTC37Q6PGP7 1564 aa14.87□□□□□ -0.03
ATRIP-206ENST00000635084 KDM6BO15054 1643 aa14.87□□□□□ -0.03
ATRIP-206ENST00000635084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.87□□□□□ -0.03
ATRIP-206ENST00000635084 KIF14Q15058 1648 aa14.86□□□□□ -0.03
ATRIP-206ENST00000635084 TROQ12816 1431 aaPredicted RBP14.85□□□□□ -0.03
ATRIP-206ENST00000635084 VPS8Q8N3P4 1428 aa14.84□□□□□ -0.03
ATRIP-206ENST00000635084 CDK11AQ9UQ88 783 aaPredicted RBP14.84□□□□□ -0.03
ATRIP-206ENST00000635084 MYO5CQ9NQX4 1742 aa14.81□□□□□ -0.04
ATRIP-206ENST00000635084 CFAP74Q9C0B2 1584 aa14.79□□□□□ -0.04
ATRIP-206ENST00000635084 COL17A1Q9UMD9 1497 aaPredicted RBP14.79□□□□□ -0.04
ATRIP-206ENST00000635084 NEO1Q92859 1461 aa14.78□□□□□ -0.04
ATRIP-206ENST00000635084 TIAM1Q13009 1591 aa14.77□□□□□ -0.04
ATRIP-206ENST00000635084 ARAP3Q8WWN8 1544 aa14.76□□□□□ -0.05
ATRIP-206ENST00000635084 EHBP1L1Q8N3D4 1523 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms