RNA–Protein interactions for RNA: ENST00000632009.1

LPIN3-205, Transcript of lipin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LPIN3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN3-205ENST00000632009 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
LPIN3-205ENST00000632009 HRCP23327 699 aa16.12■□□□□ 0.17
LPIN3-205ENST00000632009 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
LPIN3-205ENST00000632009 TNIKQ9UKE5 1360 aa16.09■□□□□ 0.17
LPIN3-205ENST00000632009 CLIP1P30622 1438 aa16.08■□□□□ 0.16
LPIN3-205ENST00000632009 CARMIL2Q6F5E8 1435 aa16.08■□□□□ 0.16
LPIN3-205ENST00000632009 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
LPIN3-205ENST00000632009 GRIN2AQ12879 1464 aa16.05■□□□□ 0.16
LPIN3-205ENST00000632009 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
LPIN3-205ENST00000632009 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
LPIN3-205ENST00000632009 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
LPIN3-205ENST00000632009 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
LPIN3-205ENST00000632009 CUL7Q14999 1698 aa16.01■□□□□ 0.15
LPIN3-205ENST00000632009 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
LPIN3-205ENST00000632009 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
LPIN3-205ENST00000632009 PRG4Q92954 1404 aaPredicted RBP15.95■□□□□ 0.14
LPIN3-205ENST00000632009 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
LPIN3-205ENST00000632009 PTPRGP23470 1445 aa15.94■□□□□ 0.14
LPIN3-205ENST00000632009 KIF21BO75037 1637 aa15.93■□□□□ 0.14
LPIN3-205ENST00000632009 PBRM1Q86U86 1689 aa15.93■□□□□ 0.14
LPIN3-205ENST00000632009 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
LPIN3-205ENST00000632009 KCNH8Q96L42 1107 aa15.87■□□□□ 0.13
LPIN3-205ENST00000632009 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
LPIN3-205ENST00000632009 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
LPIN3-205ENST00000632009 NUP160Q12769 1436 aa15.85■□□□□ 0.13
LPIN3-205ENST00000632009 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
LPIN3-205ENST00000632009 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
LPIN3-205ENST00000632009 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
LPIN3-205ENST00000632009 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
LPIN3-205ENST00000632009 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
LPIN3-205ENST00000632009 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
LPIN3-205ENST00000632009 CHD1O14646 1710 aa15.77■□□□□ 0.11
LPIN3-205ENST00000632009 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
LPIN3-205ENST00000632009 ZNF777Q9ULD5 760 aaPredicted RBP15.74■□□□□ 0.11
LPIN3-205ENST00000632009 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
LPIN3-205ENST00000632009 ARHGAP35Q9NRY4 1499 aa15.73■□□□□ 0.11
LPIN3-205ENST00000632009 ITGAEP38570 1179 aa15.73■□□□□ 0.11
LPIN3-205ENST00000632009 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
LPIN3-205ENST00000632009 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
LPIN3-205ENST00000632009 FAM50AQ14320 339 aaKnown RBP15.71■□□□□ 0.11
LPIN3-205ENST00000632009 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
LPIN3-205ENST00000632009 UACAQ9BZF9 1416 aa15.67■□□□□ 0.1
LPIN3-205ENST00000632009 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
LPIN3-205ENST00000632009 ZEB1P37275 1124 aaPredicted RBP15.65■□□□□ 0.1
LPIN3-205ENST00000632009 CTTNBP2Q8WZ74 1663 aa15.64■□□□□ 0.09
LPIN3-205ENST00000632009 PLB1Q6P1J6 1458 aa15.63■□□□□ 0.09
LPIN3-205ENST00000632009 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
LPIN3-205ENST00000632009 DISP1Q96F81 1524 aa15.61■□□□□ 0.09
LPIN3-205ENST00000632009 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
LPIN3-205ENST00000632009 ARHGEF11O15085 1522 aa15.6■□□□□ 0.09
LPIN3-205ENST00000632009 CASKIN1Q8WXD9 1431 aa15.6■□□□□ 0.09
LPIN3-205ENST00000632009 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
LPIN3-205ENST00000632009 KIAA0556O60303 1618 aa15.58■□□□□ 0.09
LPIN3-205ENST00000632009 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
LPIN3-205ENST00000632009 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
LPIN3-205ENST00000632009 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
LPIN3-205ENST00000632009 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
LPIN3-205ENST00000632009 CCDC18Q5T9S5 1454 aa15.53■□□□□ 0.08
LPIN3-205ENST00000632009 ERCC6L2Q5T890 1561 aa15.52■□□□□ 0.08
LPIN3-205ENST00000632009 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.07
LPIN3-205ENST00000632009 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
LPIN3-205ENST00000632009 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
LPIN3-205ENST00000632009 HECW1Q76N89 1606 aa15.48■□□□□ 0.07
LPIN3-205ENST00000632009 EPRSP07814 1512 aaKnown RBP15.48■□□□□ 0.07
LPIN3-205ENST00000632009 CDK13Q14004 1512 aaKnown RBP15.47■□□□□ 0.07
LPIN3-205ENST00000632009 SAMD9Q5K651 1589 aa15.46■□□□□ 0.07
LPIN3-205ENST00000632009 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
LPIN3-205ENST00000632009 ATP10BO94823 1461 aa15.45■□□□□ 0.06
LPIN3-205ENST00000632009 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
LPIN3-205ENST00000632009 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
LPIN3-205ENST00000632009 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
LPIN3-205ENST00000632009 NUP153P49790 1475 aaKnown RBP15.44■□□□□ 0.06
LPIN3-205ENST00000632009 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
LPIN3-205ENST00000632009 ASXL2Q76L83 1435 aa15.42■□□□□ 0.06
LPIN3-205ENST00000632009 RIMBP3CA6NJZ7 1639 aa15.42■□□□□ 0.06
LPIN3-205ENST00000632009 RIMBP3BA6NNM3 1639 aa15.42■□□□□ 0.06
LPIN3-205ENST00000632009 RIMBP3Q9UFD9 1639 aa15.42■□□□□ 0.06
LPIN3-205ENST00000632009 CENPBP07199 599 aaPredicted RBP15.4■□□□□ 0.06
LPIN3-205ENST00000632009 LRRC9Q6ZRR7 1453 aa15.39■□□□□ 0.05
LPIN3-205ENST00000632009 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
LPIN3-205ENST00000632009 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
LPIN3-205ENST00000632009 TRIM52Q96A61 297 aa15.36■□□□□ 0.05
LPIN3-205ENST00000632009 UHRF1BP1LA0JNW5 1464 aa15.36■□□□□ 0.05
LPIN3-205ENST00000632009 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
LPIN3-205ENST00000632009 WDR7Q9Y4E6 1490 aa15.34■□□□□ 0.05
LPIN3-205ENST00000632009 ESF1Q9H501 851 aaKnown RBP15.34■□□□□ 0.05
LPIN3-205ENST00000632009 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
LPIN3-205ENST00000632009 ARID4BQ4LE39 1312 aaPredicted RBP15.34■□□□□ 0.05
LPIN3-205ENST00000632009 NCOA2Q15596 1464 aa15.33■□□□□ 0.05
LPIN3-205ENST00000632009 ABCA8O94911 1581 aa15.33■□□□□ 0.05
LPIN3-205ENST00000632009 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
LPIN3-205ENST00000632009 RRP7BPQ9NSQ0 103 aa15.32■□□□□ 0.04
LPIN3-205ENST00000632009 EHBP1L1Q8N3D4 1523 aa15.32■□□□□ 0.04
LPIN3-205ENST00000632009 KDM5BQ9UGL1 1544 aa15.31■□□□□ 0.04
LPIN3-205ENST00000632009 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
LPIN3-205ENST00000632009 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
LPIN3-205ENST00000632009 ARHGAP5Q13017 1502 aa15.29■□□□□ 0.04
LPIN3-205ENST00000632009 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
LPIN3-205ENST00000632009 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
LPIN3-205ENST00000632009 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms