RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 DNAJC5Q9H3Z4 198 aa27.37■■□□□ 1.97
CDC42EP4-209ENST00000630622 SHROOM2Q13796 1616 aa27.37■■□□□ 1.97
CDC42EP4-209ENST00000630622 GOLGA3Q08378 1498 aa27.37■■□□□ 1.97
CDC42EP4-209ENST00000630622 IQGAP2Q13576 1575 aa27.35■■□□□ 1.97
CDC42EP4-209ENST00000630622 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
CDC42EP4-209ENST00000630622 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
CDC42EP4-209ENST00000630622 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
CDC42EP4-209ENST00000630622 UGGT2Q9NYU1 1516 aa27.22■■□□□ 1.95
CDC42EP4-209ENST00000630622 RIMBP3CA6NJZ7 1639 aa27.21■■□□□ 1.95
CDC42EP4-209ENST00000630622 RIMBP3BA6NNM3 1639 aa27.21■■□□□ 1.95
CDC42EP4-209ENST00000630622 RIMBP3Q9UFD9 1639 aa27.21■■□□□ 1.95
CDC42EP4-209ENST00000630622 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
CDC42EP4-209ENST00000630622 UBTFP17480 764 aaKnown RBP27.2■■□□□ 1.94
CDC42EP4-209ENST00000630622 PRG4Q92954 1404 aaPredicted RBP27.19■■□□□ 1.94
CDC42EP4-209ENST00000630622 DISP1Q96F81 1524 aa27.12■■□□□ 1.93
CDC42EP4-209ENST00000630622 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
CDC42EP4-209ENST00000630622 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
CDC42EP4-209ENST00000630622 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
CDC42EP4-209ENST00000630622 SAMD9Q5K651 1589 aa27.07■■□□□ 1.92
CDC42EP4-209ENST00000630622 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
CDC42EP4-209ENST00000630622 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
CDC42EP4-209ENST00000630622 EFCAB5A4FU69 1503 aa27■■□□□ 1.91
CDC42EP4-209ENST00000630622 RANGAP1P46060 587 aaPredicted RBP26.98■■□□□ 1.91
CDC42EP4-209ENST00000630622 ARHGAP35Q9NRY4 1499 aa26.94■■□□□ 1.9
CDC42EP4-209ENST00000630622 PTPRGP23470 1445 aa26.91■■□□□ 1.9
CDC42EP4-209ENST00000630622 P3H3Q8IVL6 736 aa26.91■■□□□ 1.9
CDC42EP4-209ENST00000630622 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
CDC42EP4-209ENST00000630622 CLIP1P30622 1438 aa26.88■■□□□ 1.89
CDC42EP4-209ENST00000630622 FHOD3Q2V2M9 1422 aa26.88■■□□□ 1.89
CDC42EP4-209ENST00000630622 CEP162Q5TB80 1403 aa26.88■■□□□ 1.89
CDC42EP4-209ENST00000630622 TTBK1Q5TCY1 1321 aaPredicted RBP26.83■■□□□ 1.89
CDC42EP4-209ENST00000630622 ABCA8O94911 1581 aa26.78■■□□□ 1.88
CDC42EP4-209ENST00000630622 ADCY10Q96PN6 1610 aa26.78■■□□□ 1.88
CDC42EP4-209ENST00000630622 PLB1Q6P1J6 1458 aa26.76■■□□□ 1.87
CDC42EP4-209ENST00000630622 UACAQ9BZF9 1416 aa26.75■■□□□ 1.87
CDC42EP4-209ENST00000630622 UHRF1BP1LA0JNW5 1464 aa26.74■■□□□ 1.87
CDC42EP4-209ENST00000630622 ABCC2Q92887 1545 aa26.74■■□□□ 1.87
CDC42EP4-209ENST00000630622 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
CDC42EP4-209ENST00000630622 RAPGEF6Q8TEU7 1601 aa26.7■■□□□ 1.86
CDC42EP4-209ENST00000630622 KDM5BQ9UGL1 1544 aa26.61■■□□□ 1.85
CDC42EP4-209ENST00000630622 NUP153P49790 1475 aaKnown RBP26.61■■□□□ 1.85
CDC42EP4-209ENST00000630622 PCF11O94913 1555 aaKnown RBP26.6■■□□□ 1.85
CDC42EP4-209ENST00000630622 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
CDC42EP4-209ENST00000630622 CASKIN1Q8WXD9 1431 aa26.57■■□□□ 1.84
CDC42EP4-209ENST00000630622 HECW1Q76N89 1606 aa26.56■■□□□ 1.84
CDC42EP4-209ENST00000630622 ATP10BO94823 1461 aa26.54■■□□□ 1.84
CDC42EP4-209ENST00000630622 FYCO1Q9BQS8 1478 aa26.54■■□□□ 1.84
CDC42EP4-209ENST00000630622 VPS8Q8N3P4 1428 aa26.53■■□□□ 1.84
CDC42EP4-209ENST00000630622 LRRIQ1Q96JM4 1722 aa26.53■■□□□ 1.84
CDC42EP4-209ENST00000630622 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
CDC42EP4-209ENST00000630622 MAPKBP1O60336 1514 aa26.5■■□□□ 1.83
CDC42EP4-209ENST00000630622 EPRSP07814 1512 aaKnown RBP26.48■■□□□ 1.83
CDC42EP4-209ENST00000630622 ARID3CA6NKF2 412 aa26.47■■□□□ 1.83
CDC42EP4-209ENST00000630622 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
CDC42EP4-209ENST00000630622 ATP1B4Q9UN42 357 aaPredicted RBP26.45■■□□□ 1.82
CDC42EP4-209ENST00000630622 ASXL2Q76L83 1435 aa26.42■■□□□ 1.82
CDC42EP4-209ENST00000630622 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
CDC42EP4-209ENST00000630622 WDR7Q9Y4E6 1490 aa26.36■■□□□ 1.81
CDC42EP4-209ENST00000630622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.35■■□□□ 1.81
CDC42EP4-209ENST00000630622 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
CDC42EP4-209ENST00000630622 CFAP43Q8NDM7 1665 aa26.32■■□□□ 1.8
CDC42EP4-209ENST00000630622 ABCC10Q5T3U5 1492 aa26.31■■□□□ 1.8
CDC42EP4-209ENST00000630622 DIP2BQ9P265 1576 aa26.31■■□□□ 1.8
CDC42EP4-209ENST00000630622 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
CDC42EP4-209ENST00000630622 MAGI3Q5TCQ9 1506 aa26.29■■□□□ 1.8
CDC42EP4-209ENST00000630622 TIAM1Q13009 1591 aa26.28■■□□□ 1.8
CDC42EP4-209ENST00000630622 PLEKHD1A6NEE1 506 aa26.27■■□□□ 1.8
CDC42EP4-209ENST00000630622 MAP3K1Q13233 1512 aa26.27■■□□□ 1.8
CDC42EP4-209ENST00000630622 CDK11AQ9UQ88 783 aaPredicted RBP26.25■■□□□ 1.79
CDC42EP4-209ENST00000630622 GLI2P10070 1586 aa26.24■■□□□ 1.79
CDC42EP4-209ENST00000630622 TROQ12816 1431 aaPredicted RBP26.24■■□□□ 1.79
CDC42EP4-209ENST00000630622 KCNH8Q96L42 1107 aa26.2■■□□□ 1.78
CDC42EP4-209ENST00000630622 FAM69CQ0P6D2 419 aa26.19■■□□□ 1.78
CDC42EP4-209ENST00000630622 KIF14Q15058 1648 aa26.18■■□□□ 1.78
CDC42EP4-209ENST00000630622 TRHP20396 242 aaPredicted RBP26.18■■□□□ 1.78
CDC42EP4-209ENST00000630622 ABCA9Q8IUA7 1624 aa26.17■■□□□ 1.78
CDC42EP4-209ENST00000630622 EHBP1L1Q8N3D4 1523 aa26.17■■□□□ 1.78
CDC42EP4-209ENST00000630622 MAP3K4Q9Y6R4 1608 aa26.16■■□□□ 1.78
CDC42EP4-209ENST00000630622 MTUS2Q5JR59 1369 aa26.15■■□□□ 1.78
CDC42EP4-209ENST00000630622 LRRC9Q6ZRR7 1453 aa26.15■■□□□ 1.78
CDC42EP4-209ENST00000630622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.14■■□□□ 1.78
CDC42EP4-209ENST00000630622 TTC37Q6PGP7 1564 aa26.12■■□□□ 1.77
CDC42EP4-209ENST00000630622 APLP2Q06481 763 aa26.12■■□□□ 1.77
CDC42EP4-209ENST00000630622 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
CDC42EP4-209ENST00000630622 PPRC1Q5VV67 1664 aaKnown RBP26.07■■□□□ 1.76
CDC42EP4-209ENST00000630622 TSPOAP1O95153 1857 aa26.06■■□□□ 1.76
CDC42EP4-209ENST00000630622 CD109Q6YHK3 1445 aa26.05■■□□□ 1.76
CDC42EP4-209ENST00000630622 SUPT6HQ7KZ85 1726 aaKnown RBP26.05■■□□□ 1.76
CDC42EP4-209ENST00000630622 MYO5CQ9NQX4 1742 aa26.02■■□□□ 1.76
CDC42EP4-209ENST00000630622 NCOA2Q15596 1464 aa26■■□□□ 1.75
CDC42EP4-209ENST00000630622 CDC42BPAQ5VT25 1732 aa26■■□□□ 1.75
CDC42EP4-209ENST00000630622 PREX2Q70Z35 1606 aa25.97■■□□□ 1.75
CDC42EP4-209ENST00000630622 PLCH2O75038 1416 aa25.97■■□□□ 1.75
CDC42EP4-209ENST00000630622 ARAP3Q8WWN8 1544 aa25.96■■□□□ 1.75
CDC42EP4-209ENST00000630622 CDC42BPBQ9Y5S2 1711 aa25.96■■□□□ 1.75
CDC42EP4-209ENST00000630622 GPATCH8Q9UKJ3 1502 aaKnown RBP25.94■■□□□ 1.74
CDC42EP4-209ENST00000630622 TEX14Q8IWB6 1497 aa25.94■■□□□ 1.74
CDC42EP4-209ENST00000630622 CCNB3Q8WWL7 1395 aa25.92■■□□□ 1.74
CDC42EP4-209ENST00000630622 ITSN2Q9NZM3 1697 aa25.91■■□□□ 1.74
CDC42EP4-209ENST00000630622 FANCAO15360 1455 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms