RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 KIAA0586Q9BVV6 1533 aa18.59■□□□□ 0.57
CHD2-217ENST00000629136 CARMIL1Q5VZK9 1371 aa18.57■□□□□ 0.56
CHD2-217ENST00000629136 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
CHD2-217ENST00000629136 IQGAP2Q13576 1575 aa18.52■□□□□ 0.56
CHD2-217ENST00000629136 CTTNBP2Q8WZ74 1663 aa18.5■□□□□ 0.55
CHD2-217ENST00000629136 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
CHD2-217ENST00000629136 TRHP20396 242 aaPredicted RBP18.47■□□□□ 0.55
CHD2-217ENST00000629136 ADCY10Q96PN6 1610 aa18.47■□□□□ 0.55
CHD2-217ENST00000629136 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
CHD2-217ENST00000629136 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.54
CHD2-217ENST00000629136 PRXQ9BXM0 1461 aa18.39■□□□□ 0.53
CHD2-217ENST00000629136 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
CHD2-217ENST00000629136 KIAA0556O60303 1618 aa18.38■□□□□ 0.53
CHD2-217ENST00000629136 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
CHD2-217ENST00000629136 CARMIL2Q6F5E8 1435 aa18.35■□□□□ 0.53
CHD2-217ENST00000629136 DIP2BQ9P265 1576 aa18.32■□□□□ 0.52
CHD2-217ENST00000629136 TNIKQ9UKE5 1360 aa18.31■□□□□ 0.52
CHD2-217ENST00000629136 PTPRGP23470 1445 aa18.3■□□□□ 0.52
CHD2-217ENST00000629136 ABCC2Q92887 1545 aa18.26■□□□□ 0.51
CHD2-217ENST00000629136 ABCC10Q5T3U5 1492 aa18.26■□□□□ 0.51
CHD2-217ENST00000629136 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
CHD2-217ENST00000629136 EEA1Q15075 1411 aa18.24■□□□□ 0.51
CHD2-217ENST00000629136 ZCCHC11Q5TAX3 1644 aaKnown RBP18.23■□□□□ 0.51
CHD2-217ENST00000629136 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
CHD2-217ENST00000629136 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
CHD2-217ENST00000629136 GOLGA3Q08378 1498 aa18.2■□□□□ 0.5
CHD2-217ENST00000629136 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHD2-217ENST00000629136 TSPOAP1O95153 1857 aa18.19■□□□□ 0.5
CHD2-217ENST00000629136 SAMD9Q5K651 1589 aa18.19■□□□□ 0.5
CHD2-217ENST00000629136 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
CHD2-217ENST00000629136 KIF21BO75037 1637 aa18.19■□□□□ 0.5
CHD2-217ENST00000629136 KDM5BQ9UGL1 1544 aa18.18■□□□□ 0.5
CHD2-217ENST00000629136 ABCA8O94911 1581 aa18.17■□□□□ 0.5
CHD2-217ENST00000629136 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.5
CHD2-217ENST00000629136 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
CHD2-217ENST00000629136 ASXL2Q76L83 1435 aa18.14■□□□□ 0.49
CHD2-217ENST00000629136 FAM69CQ0P6D2 419 aa18.12■□□□□ 0.49
CHD2-217ENST00000629136 GLI2P10070 1586 aa18.12■□□□□ 0.49
CHD2-217ENST00000629136 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
CHD2-217ENST00000629136 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
CHD2-217ENST00000629136 FAM9AQ8IZU1 332 aaPredicted RBP18.07■□□□□ 0.48
CHD2-217ENST00000629136 EPRSP07814 1512 aaKnown RBP18.06■□□□□ 0.48
CHD2-217ENST00000629136 KDM6BO15054 1643 aa18.05■□□□□ 0.48
CHD2-217ENST00000629136 RAPGEF6Q8TEU7 1601 aa18.04■□□□□ 0.48
CHD2-217ENST00000629136 WDR7Q9Y4E6 1490 aa18.03■□□□□ 0.48
CHD2-217ENST00000629136 CFAP43Q8NDM7 1665 aa18.01■□□□□ 0.47
CHD2-217ENST00000629136 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
CHD2-217ENST00000629136 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
CHD2-217ENST00000629136 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
CHD2-217ENST00000629136 ATP10BO94823 1461 aa17.94■□□□□ 0.46
CHD2-217ENST00000629136 NUP153P49790 1475 aaKnown RBP17.92■□□□□ 0.46
CHD2-217ENST00000629136 TEX14Q8IWB6 1497 aa17.9■□□□□ 0.46
CHD2-217ENST00000629136 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
CHD2-217ENST00000629136 ABCA9Q8IUA7 1624 aa17.89■□□□□ 0.45
CHD2-217ENST00000629136 ARHGAP35Q9NRY4 1499 aa17.87■□□□□ 0.45
CHD2-217ENST00000629136 MAGI3Q5TCQ9 1506 aa17.87■□□□□ 0.45
CHD2-217ENST00000629136 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
CHD2-217ENST00000629136 ARID3CA6NKF2 412 aa17.85■□□□□ 0.45
CHD2-217ENST00000629136 COL17A1Q9UMD9 1497 aaPredicted RBP17.85■□□□□ 0.45
CHD2-217ENST00000629136 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
CHD2-217ENST00000629136 CD109Q6YHK3 1445 aa17.83■□□□□ 0.45
CHD2-217ENST00000629136 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
CHD2-217ENST00000629136 HECW1Q76N89 1606 aa17.82■□□□□ 0.44
CHD2-217ENST00000629136 KCNH8Q96L42 1107 aa17.81■□□□□ 0.44
CHD2-217ENST00000629136 CDK13Q14004 1512 aaKnown RBP17.8■□□□□ 0.44
CHD2-217ENST00000629136 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
CHD2-217ENST00000629136 TTC37Q6PGP7 1564 aa17.75■□□□□ 0.43
CHD2-217ENST00000629136 PCF11O94913 1555 aaKnown RBP17.74■□□□□ 0.43
CHD2-217ENST00000629136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHD2-217ENST00000629136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
CHD2-217ENST00000629136 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
CHD2-217ENST00000629136 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
CHD2-217ENST00000629136 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
CHD2-217ENST00000629136 CFAP74Q9C0B2 1584 aa17.7■□□□□ 0.42
CHD2-217ENST00000629136 NEO1Q92859 1461 aa17.69■□□□□ 0.42
CHD2-217ENST00000629136 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
CHD2-217ENST00000629136 MYO5CQ9NQX4 1742 aa17.67■□□□□ 0.42
CHD2-217ENST00000629136 KIF14Q15058 1648 aa17.67■□□□□ 0.42
CHD2-217ENST00000629136 RICTORQ6R327 1708 aa17.67■□□□□ 0.42
CHD2-217ENST00000629136 PLEKHD1A6NEE1 506 aa17.65■□□□□ 0.42
CHD2-217ENST00000629136 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
CHD2-217ENST00000629136 KDM4FA0A1W2PPD8 638 aa17.63■□□□□ 0.41
CHD2-217ENST00000629136 PHLDB1Q86UU1 1377 aa17.63■□□□□ 0.41
CHD2-217ENST00000629136 CLIP1P30622 1438 aa17.62■□□□□ 0.41
CHD2-217ENST00000629136 CASKIN1Q8WXD9 1431 aa17.62■□□□□ 0.41
CHD2-217ENST00000629136 FANCAO15360 1455 aa17.61■□□□□ 0.41
CHD2-217ENST00000629136 FYCO1Q9BQS8 1478 aa17.61■□□□□ 0.41
CHD2-217ENST00000629136 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
CHD2-217ENST00000629136 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.41
CHD2-217ENST00000629136 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.4
CHD2-217ENST00000629136 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.4
CHD2-217ENST00000629136 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
CHD2-217ENST00000629136 ARHGEF40Q8TER5 1519 aa17.56■□□□□ 0.4
CHD2-217ENST00000629136 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
CHD2-217ENST00000629136 ZMYM4Q5VZL5 1548 aa17.55■□□□□ 0.4
CHD2-217ENST00000629136 PLCH2O75038 1416 aa17.55■□□□□ 0.4
CHD2-217ENST00000629136 CDC42BPAQ5VT25 1732 aa17.54■□□□□ 0.4
CHD2-217ENST00000629136 DENND4BO75064 1496 aaPredicted RBP17.53■□□□□ 0.4
CHD2-217ENST00000629136 RAPGEF3O95398 923 aa17.53■□□□□ 0.4
CHD2-217ENST00000629136 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms