RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 TSPOAP1O95153 1857 aa12.02□□□□□ -0.49
LINC00649-220ENST00000628906 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
LINC00649-220ENST00000628906 NUP160Q12769 1436 aa11.98□□□□□ -0.49
LINC00649-220ENST00000628906 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
LINC00649-220ENST00000628906 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
LINC00649-220ENST00000628906 COL17A1Q9UMD9 1497 aaPredicted RBP11.96□□□□□ -0.49
LINC00649-220ENST00000628906 GRIN2AQ12879 1464 aa11.95□□□□□ -0.5
LINC00649-220ENST00000628906 TOP2BQ02880 1626 aa11.94□□□□□ -0.5
LINC00649-220ENST00000628906 FGD5Q6ZNL6 1462 aa11.93□□□□□ -0.5
LINC00649-220ENST00000628906 PRG4Q92954 1404 aaPredicted RBP11.93□□□□□ -0.5
LINC00649-220ENST00000628906 SPATA31D1Q6ZQQ2 1576 aa11.92□□□□□ -0.5
LINC00649-220ENST00000628906 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
LINC00649-220ENST00000628906 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
LINC00649-220ENST00000628906 ADCY10Q96PN6 1610 aa11.88□□□□□ -0.51
LINC00649-220ENST00000628906 PPRC1Q5VV67 1664 aaKnown RBP11.87□□□□□ -0.51
LINC00649-220ENST00000628906 GLI2P10070 1586 aa11.83□□□□□ -0.52
LINC00649-220ENST00000628906 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
LINC00649-220ENST00000628906 PTPRMP28827 1452 aa11.79□□□□□ -0.52
LINC00649-220ENST00000628906 ABCA5Q8WWZ7 1642 aa11.78□□□□□ -0.52
LINC00649-220ENST00000628906 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
LINC00649-220ENST00000628906 CUX1P39880 1505 aa11.77□□□□□ -0.52
LINC00649-220ENST00000628906 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
LINC00649-220ENST00000628906 PLB1Q6P1J6 1458 aa11.76□□□□□ -0.53
LINC00649-220ENST00000628906 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
LINC00649-220ENST00000628906 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
LINC00649-220ENST00000628906 TEX14Q8IWB6 1497 aa11.74□□□□□ -0.53
LINC00649-220ENST00000628906 HSPA2P54652 639 aa11.72□□□□□ -0.53
LINC00649-220ENST00000628906 ADAMTSL3P82987 1691 aa11.68□□□□□ -0.54
LINC00649-220ENST00000628906 ABCC2Q92887 1545 aa11.68□□□□□ -0.54
LINC00649-220ENST00000628906 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
LINC00649-220ENST00000628906 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.54
LINC00649-220ENST00000628906 KIF21BO75037 1637 aa11.64□□□□□ -0.55
LINC00649-220ENST00000628906 PTPRGP23470 1445 aa11.64□□□□□ -0.55
LINC00649-220ENST00000628906 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
LINC00649-220ENST00000628906 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
LINC00649-220ENST00000628906 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
LINC00649-220ENST00000628906 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
LINC00649-220ENST00000628906 UHRF1BP1LA0JNW5 1464 aa11.57□□□□□ -0.56
LINC00649-220ENST00000628906 MAGI3Q5TCQ9 1506 aa11.55□□□□□ -0.56
LINC00649-220ENST00000628906 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
LINC00649-220ENST00000628906 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
LINC00649-220ENST00000628906 YEATS2Q9ULM3 1422 aa11.53□□□□□ -0.56
LINC00649-220ENST00000628906 CUL7Q14999 1698 aa11.52□□□□□ -0.56
LINC00649-220ENST00000628906 BCORL1Q5H9F3 1711 aa11.52□□□□□ -0.56
LINC00649-220ENST00000628906 IQSEC2Q5JU85 1478 aa11.52□□□□□ -0.56
LINC00649-220ENST00000628906 KDM5BQ9UGL1 1544 aa11.52□□□□□ -0.57
LINC00649-220ENST00000628906 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
LINC00649-220ENST00000628906 CD109Q6YHK3 1445 aa11.52□□□□□ -0.57
LINC00649-220ENST00000628906 TTBK1Q5TCY1 1321 aaPredicted RBP11.51□□□□□ -0.57
LINC00649-220ENST00000628906 ARAP3Q8WWN8 1544 aa11.5□□□□□ -0.57
LINC00649-220ENST00000628906 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
LINC00649-220ENST00000628906 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
LINC00649-220ENST00000628906 LTBP4Q8N2S1 1624 aa11.46□□□□□ -0.58
LINC00649-220ENST00000628906 FOXD1Q16676 465 aa11.45□□□□□ -0.58
LINC00649-220ENST00000628906 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
LINC00649-220ENST00000628906 CARMIL2Q6F5E8 1435 aa11.44□□□□□ -0.58
LINC00649-220ENST00000628906 RIMS1Q86UR5 1692 aaKnown RBP11.44□□□□□ -0.58
LINC00649-220ENST00000628906 MED1Q15648 1581 aaPredicted RBP11.44□□□□□ -0.58
LINC00649-220ENST00000628906 STRCQ7RTU9 1775 aa11.44□□□□□ -0.58
LINC00649-220ENST00000628906 PTPRTO14522 1441 aa11.43□□□□□ -0.58
LINC00649-220ENST00000628906 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
LINC00649-220ENST00000628906 CFAP43Q8NDM7 1665 aa11.42□□□□□ -0.58
LINC00649-220ENST00000628906 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
LINC00649-220ENST00000628906 UBAP1LF5GYI3 381 aa11.41□□□□□ -0.58
LINC00649-220ENST00000628906 RAPGEF3O95398 923 aa11.41□□□□□ -0.58
LINC00649-220ENST00000628906 ZCCHC11Q5TAX3 1644 aaKnown RBP11.4□□□□□ -0.58
LINC00649-220ENST00000628906 KCNH8Q96L42 1107 aa11.4□□□□□ -0.58
LINC00649-220ENST00000628906 HSPA1LP34931 641 aa11.36□□□□□ -0.59
LINC00649-220ENST00000628906 SRCAPQ6ZRS2 3230 aa11.35□□□□□ -0.59
LINC00649-220ENST00000628906 POGZQ7Z3K3 1410 aa11.33□□□□□ -0.6
LINC00649-220ENST00000628906 PREX1Q8TCU6 1659 aa11.32□□□□□ -0.6
LINC00649-220ENST00000628906 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
LINC00649-220ENST00000628906 IGF1RP08069 1367 aa11.29□□□□□ -0.6
LINC00649-220ENST00000628906 TTC37Q6PGP7 1564 aa11.29□□□□□ -0.6
LINC00649-220ENST00000628906 SETD1BQ9UPS6 1966 aaKnown RBP11.29□□□□□ -0.6
LINC00649-220ENST00000628906 BIVM-ERCC5R4GMW8 1640 aa11.29□□□□□ -0.6
LINC00649-220ENST00000628906 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
LINC00649-220ENST00000628906 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
LINC00649-220ENST00000628906 UHRF1BP1Q6BDS2 1440 aa11.26□□□□□ -0.61
LINC00649-220ENST00000628906 FANCAO15360 1455 aa11.26□□□□□ -0.61
LINC00649-220ENST00000628906 NEO1Q92859 1461 aa11.26□□□□□ -0.61
LINC00649-220ENST00000628906 FRMPD1Q5SYB0 1578 aa11.26□□□□□ -0.61
LINC00649-220ENST00000628906 ARHGEF40Q8TER5 1519 aa11.25□□□□□ -0.61
LINC00649-220ENST00000628906 MLECQ14165 292 aa11.24□□□□□ -0.61
LINC00649-220ENST00000628906 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
LINC00649-220ENST00000628906 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
LINC00649-220ENST00000628906 IQGAP2Q13576 1575 aa11.21□□□□□ -0.61
LINC00649-220ENST00000628906 PIP4K2BP78356 416 aa11.21□□□□□ -0.61
LINC00649-220ENST00000628906 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.62
LINC00649-220ENST00000628906 NCOA1Q15788 1441 aa11.2□□□□□ -0.62
LINC00649-220ENST00000628906 TOM1O60784 492 aa11.2□□□□□ -0.62
LINC00649-220ENST00000628906 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
LINC00649-220ENST00000628906 SIGLEC1Q9BZZ2 1709 aa11.19□□□□□ -0.62
LINC00649-220ENST00000628906 ARHGEF12Q9NZN5 1544 aa11.19□□□□□ -0.62
LINC00649-220ENST00000628906 FHOD3Q2V2M9 1422 aa11.18□□□□□ -0.62
LINC00649-220ENST00000628906 DENND4BO75064 1496 aaPredicted RBP11.17□□□□□ -0.62
LINC00649-220ENST00000628906 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
LINC00649-220ENST00000628906 UGGT2Q9NYU1 1516 aa11.16□□□□□ -0.62
LINC00649-220ENST00000628906 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
LINC00649-220ENST00000628906 POTEAQ6S8J7 498 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms