RNA–Protein interactions for RNA: ENST00000628399.1

RAD1-208, Transcript of RAD1 checkpoint DNA exonuclease, humanhuman

TSL 3 BASIC

Gene RAD1, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1-208ENST00000628399 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
RAD1-208ENST00000628399 ARHGAP35Q9NRY4 1499 aa26.5■■□□□ 1.83
RAD1-208ENST00000628399 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
RAD1-208ENST00000628399 VPS8Q8N3P4 1428 aa26.44■■□□□ 1.82
RAD1-208ENST00000628399 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
RAD1-208ENST00000628399 GRIN2AQ12879 1464 aa26.43■■□□□ 1.82
RAD1-208ENST00000628399 CHMP7Q8WUX9 453 aaPredicted RBP26.34■■□□□ 1.81
RAD1-208ENST00000628399 EFCAB5A4FU69 1503 aa26.32■■□□□ 1.8
RAD1-208ENST00000628399 IQGAP2Q13576 1575 aa26.32■■□□□ 1.8
RAD1-208ENST00000628399 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
RAD1-208ENST00000628399 SAMD9Q5K651 1589 aa26.3■■□□□ 1.8
RAD1-208ENST00000628399 KIAA0586Q9BVV6 1533 aa26.29■■□□□ 1.8
RAD1-208ENST00000628399 PPARGC1BQ86YN6 1023 aaKnown RBP26.28■■□□□ 1.8
RAD1-208ENST00000628399 FBLN2P98095 1184 aa26.27■■□□□ 1.8
RAD1-208ENST00000628399 NUP160Q12769 1436 aa26.26■■□□□ 1.79
RAD1-208ENST00000628399 P3H3Q8IVL6 736 aa26.26■■□□□ 1.79
RAD1-208ENST00000628399 FHOD3Q2V2M9 1422 aa26.24■■□□□ 1.79
RAD1-208ENST00000628399 UGGT2Q9NYU1 1516 aa26.22■■□□□ 1.79
RAD1-208ENST00000628399 CHD1O14646 1710 aa26.22■■□□□ 1.79
RAD1-208ENST00000628399 TRIM26Q12899 539 aaPredicted RBP26.15■■□□□ 1.78
RAD1-208ENST00000628399 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
RAD1-208ENST00000628399 DISP1Q96F81 1524 aa26.12■■□□□ 1.77
RAD1-208ENST00000628399 PCF11O94913 1555 aaKnown RBP26.1■■□□□ 1.77
RAD1-208ENST00000628399 FMN1Q68DA7 1419 aa26.07■■□□□ 1.76
RAD1-208ENST00000628399 KIAA0556O60303 1618 aa26.07■■□□□ 1.76
RAD1-208ENST00000628399 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
RAD1-208ENST00000628399 APLP2Q06481 763 aa26.05■■□□□ 1.76
RAD1-208ENST00000628399 JPH4Q96JJ6 628 aa26.05■■□□□ 1.76
RAD1-208ENST00000628399 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
RAD1-208ENST00000628399 FYCO1Q9BQS8 1478 aa26.02■■□□□ 1.76
RAD1-208ENST00000628399 MAP3K1Q13233 1512 aa26.01■■□□□ 1.75
RAD1-208ENST00000628399 KANK4Q5T7N3 995 aaPredicted RBP26.01■■□□□ 1.75
RAD1-208ENST00000628399 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
RAD1-208ENST00000628399 LRRIQ1Q96JM4 1722 aa25.95■■□□□ 1.75
RAD1-208ENST00000628399 CFAP43Q8NDM7 1665 aa25.94■■□□□ 1.74
RAD1-208ENST00000628399 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
RAD1-208ENST00000628399 CLASP1Q7Z460 1538 aa25.91■■□□□ 1.74
RAD1-208ENST00000628399 CARMIL2Q6F5E8 1435 aa25.9■■□□□ 1.74
RAD1-208ENST00000628399 ATP1B4Q9UN42 357 aaPredicted RBP25.9■■□□□ 1.74
RAD1-208ENST00000628399 PRG4Q92954 1404 aaPredicted RBP25.87■■□□□ 1.73
RAD1-208ENST00000628399 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
RAD1-208ENST00000628399 HECW1Q76N89 1606 aa25.82■■□□□ 1.72
RAD1-208ENST00000628399 RAPGEF6Q8TEU7 1601 aa25.8■■□□□ 1.72
RAD1-208ENST00000628399 ERCC6L2Q5T890 1561 aa25.79■■□□□ 1.72
RAD1-208ENST00000628399 EPRSP07814 1512 aaKnown RBP25.77■■□□□ 1.72
RAD1-208ENST00000628399 PLB1Q6P1J6 1458 aa25.76■■□□□ 1.71
RAD1-208ENST00000628399 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
RAD1-208ENST00000628399 CCDC18Q5T9S5 1454 aa25.75■■□□□ 1.71
RAD1-208ENST00000628399 CDK13Q14004 1512 aaKnown RBP25.72■■□□□ 1.71
RAD1-208ENST00000628399 ABCA8O94911 1581 aa25.72■■□□□ 1.71
RAD1-208ENST00000628399 MAGI3Q5TCQ9 1506 aa25.71■■□□□ 1.71
RAD1-208ENST00000628399 PTPRGP23470 1445 aa25.69■■□□□ 1.7
RAD1-208ENST00000628399 OSCARQ8IYS5 282 aa25.66■■□□□ 1.7
RAD1-208ENST00000628399 MTUS2Q5JR59 1369 aa25.65■■□□□ 1.7
RAD1-208ENST00000628399 RRBP1Q9P2E9 1410 aaKnown RBP25.65■■□□□ 1.7
RAD1-208ENST00000628399 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
RAD1-208ENST00000628399 PHLDB1Q86UU1 1377 aa25.64■■□□□ 1.7
RAD1-208ENST00000628399 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
RAD1-208ENST00000628399 SUPT6HQ7KZ85 1726 aaKnown RBP25.57■■□□□ 1.68
RAD1-208ENST00000628399 ARHGEF11O15085 1522 aa25.56■■□□□ 1.68
RAD1-208ENST00000628399 ATP10BO94823 1461 aa25.56■■□□□ 1.68
RAD1-208ENST00000628399 NCOA2Q15596 1464 aa25.56■■□□□ 1.68
RAD1-208ENST00000628399 UACAQ9BZF9 1416 aa25.55■■□□□ 1.68
RAD1-208ENST00000628399 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
RAD1-208ENST00000628399 ABCC2Q92887 1545 aa25.48■■□□□ 1.67
RAD1-208ENST00000628399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
RAD1-208ENST00000628399 HNRNPUL2Q1KMD3 747 aaKnown RBP25.48■■□□□ 1.67
RAD1-208ENST00000628399 CDK11AQ9UQ88 783 aaPredicted RBP25.46■■□□□ 1.67
RAD1-208ENST00000628399 TROQ12816 1431 aaPredicted RBP25.46■■□□□ 1.67
RAD1-208ENST00000628399 MYOM3Q5VTT5 1437 aa25.44■■□□□ 1.66
RAD1-208ENST00000628399 FGD6Q6ZV73 1430 aa25.44■■□□□ 1.66
RAD1-208ENST00000628399 UHRF1BP1LA0JNW5 1464 aa25.44■■□□□ 1.66
RAD1-208ENST00000628399 ADCY10Q96PN6 1610 aa25.41■■□□□ 1.66
RAD1-208ENST00000628399 KIF14Q15058 1648 aa25.38■■□□□ 1.65
RAD1-208ENST00000628399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.65
RAD1-208ENST00000628399 PLEKHD1A6NEE1 506 aa25.37■■□□□ 1.65
RAD1-208ENST00000628399 KDM5BQ9UGL1 1544 aa25.35■■□□□ 1.65
RAD1-208ENST00000628399 FAM50AQ14320 339 aaKnown RBP25.34■■□□□ 1.65
RAD1-208ENST00000628399 ZCCHC11Q5TAX3 1644 aaKnown RBP25.34■■□□□ 1.65
RAD1-208ENST00000628399 PTPN23Q9H3S7 1636 aa25.32■■□□□ 1.64
RAD1-208ENST00000628399 MIA2Q96PC5 1412 aa25.3■■□□□ 1.64
RAD1-208ENST00000628399 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
RAD1-208ENST00000628399 HRCP23327 699 aa25.29■■□□□ 1.64
RAD1-208ENST00000628399 ABCC10Q5T3U5 1492 aa25.29■■□□□ 1.64
RAD1-208ENST00000628399 ITGAEP38570 1179 aa25.28■■□□□ 1.64
RAD1-208ENST00000628399 GPATCH8Q9UKJ3 1502 aaKnown RBP25.27■■□□□ 1.64
RAD1-208ENST00000628399 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
RAD1-208ENST00000628399 ITSN2Q9NZM3 1697 aa25.22■■□□□ 1.63
RAD1-208ENST00000628399 PTPRKQ15262 1439 aa25.21■■□□□ 1.63
RAD1-208ENST00000628399 ZNF644Q9H582 1327 aaPredicted RBP25.17■■□□□ 1.62
RAD1-208ENST00000628399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.16■■□□□ 1.62
RAD1-208ENST00000628399 RIMBP3CA6NJZ7 1639 aa25.16■■□□□ 1.62
RAD1-208ENST00000628399 RIMBP3BA6NNM3 1639 aa25.16■■□□□ 1.62
RAD1-208ENST00000628399 RIMBP3Q9UFD9 1639 aa25.16■■□□□ 1.62
RAD1-208ENST00000628399 TTC37Q6PGP7 1564 aa25.14■■□□□ 1.61
RAD1-208ENST00000628399 CFDP1Q9UEE9 299 aaPredicted RBP25.13■■□□□ 1.61
RAD1-208ENST00000628399 CDC42BPBQ9Y5S2 1711 aa25.12■■□□□ 1.61
RAD1-208ENST00000628399 CAMSAP2Q08AD1 1489 aa25.1■■□□□ 1.61
RAD1-208ENST00000628399 KCNH8Q96L42 1107 aa25.1■■□□□ 1.61
RAD1-208ENST00000628399 PREX2Q70Z35 1606 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms