RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 KIAA0586Q9BVV6 1533 aa30.89■■■□□ 2.54
MECP2-216ENST00000627864 DNAJC5Q9H3Z4 198 aa30.88■■■□□ 2.53
MECP2-216ENST00000627864 GOLGA3Q08378 1498 aa30.85■■■□□ 2.53
MECP2-216ENST00000627864 IQGAP2Q13576 1575 aa30.82■■■□□ 2.52
MECP2-216ENST00000627864 SHROOM2Q13796 1616 aa30.8■■■□□ 2.52
MECP2-216ENST00000627864 UBTFP17480 764 aaKnown RBP30.79■■■□□ 2.52
MECP2-216ENST00000627864 JPH4Q96JJ6 628 aa30.78■■■□□ 2.52
MECP2-216ENST00000627864 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
MECP2-216ENST00000627864 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
MECP2-216ENST00000627864 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
MECP2-216ENST00000627864 ARHGEF11O15085 1522 aa30.69■■■□□ 2.5
MECP2-216ENST00000627864 PRG4Q92954 1404 aaPredicted RBP30.68■■■□□ 2.5
MECP2-216ENST00000627864 ERCC6L2Q5T890 1561 aa30.66■■■□□ 2.5
MECP2-216ENST00000627864 UGGT2Q9NYU1 1516 aa30.63■■■□□ 2.49
MECP2-216ENST00000627864 LOC105371045A0A1W2PR82 267 aa30.63■■■□□ 2.49
MECP2-216ENST00000627864 RANGAP1P46060 587 aaPredicted RBP30.6■■■□□ 2.49
MECP2-216ENST00000627864 CARMIL2Q6F5E8 1435 aa30.56■■■□□ 2.48
MECP2-216ENST00000627864 DISP1Q96F81 1524 aa30.54■■■□□ 2.48
MECP2-216ENST00000627864 TNIKQ9UKE5 1360 aa30.54■■■□□ 2.48
MECP2-216ENST00000627864 KIAA0556O60303 1618 aa30.51■■■□□ 2.48
MECP2-216ENST00000627864 ARAP1Q96P48 1450 aa30.48■■■□□ 2.47
MECP2-216ENST00000627864 SAMD9Q5K651 1589 aa30.46■■■□□ 2.47
MECP2-216ENST00000627864 P3H3Q8IVL6 736 aa30.45■■■□□ 2.47
MECP2-216ENST00000627864 TTBK1Q5TCY1 1321 aaPredicted RBP30.44■■■□□ 2.46
MECP2-216ENST00000627864 CYB5RLQ6IPT4 315 aa30.42■■■□□ 2.46
MECP2-216ENST00000627864 EFCAB5A4FU69 1503 aa30.4■■■□□ 2.46
MECP2-216ENST00000627864 PTPRGP23470 1445 aa30.38■■■□□ 2.45
MECP2-216ENST00000627864 ARHGAP35Q9NRY4 1499 aa30.33■■■□□ 2.45
MECP2-216ENST00000627864 CLIP1P30622 1438 aa30.32■■■□□ 2.44
MECP2-216ENST00000627864 FHOD3Q2V2M9 1422 aa30.31■■■□□ 2.44
MECP2-216ENST00000627864 CEP162Q5TB80 1403 aa30.29■■■□□ 2.44
MECP2-216ENST00000627864 UACAQ9BZF9 1416 aa30.17■■■□□ 2.42
MECP2-216ENST00000627864 ADCY10Q96PN6 1610 aa30.17■■■□□ 2.42
MECP2-216ENST00000627864 PLB1Q6P1J6 1458 aa30.16■■■□□ 2.42
MECP2-216ENST00000627864 ABCA8O94911 1581 aa30.15■■■□□ 2.42
MECP2-216ENST00000627864 RAPGEF6Q8TEU7 1601 aa30.12■■■□□ 2.41
MECP2-216ENST00000627864 FMN1Q68DA7 1419 aa30.11■■■□□ 2.41
MECP2-216ENST00000627864 ABCC2Q92887 1545 aa30.11■■■□□ 2.41
MECP2-216ENST00000627864 UHRF1BP1LA0JNW5 1464 aa30.1■■■□□ 2.41
MECP2-216ENST00000627864 NPM1P06748 294 aaKnown RBP eCLIP30.04■■■□□ 2.4
MECP2-216ENST00000627864 ATP1B4Q9UN42 357 aaPredicted RBP30.01■■■□□ 2.39
MECP2-216ENST00000627864 PCF11O94913 1555 aaKnown RBP29.98■■■□□ 2.39
MECP2-216ENST00000627864 ZCCHC11Q5TAX3 1644 aaKnown RBP29.97■■■□□ 2.39
MECP2-216ENST00000627864 ARID3CA6NKF2 412 aa29.97■■■□□ 2.39
MECP2-216ENST00000627864 HECW1Q76N89 1606 aa29.96■■■□□ 2.39
MECP2-216ENST00000627864 KDM5BQ9UGL1 1544 aa29.96■■■□□ 2.39
MECP2-216ENST00000627864 NUP153P49790 1475 aaKnown RBP29.95■■■□□ 2.39
MECP2-216ENST00000627864 CASKIN1Q8WXD9 1431 aa29.93■■■□□ 2.38
MECP2-216ENST00000627864 LRRIQ1Q96JM4 1722 aa29.91■■■□□ 2.38
MECP2-216ENST00000627864 ATP10BO94823 1461 aa29.9■■■□□ 2.38
MECP2-216ENST00000627864 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
MECP2-216ENST00000627864 FYCO1Q9BQS8 1478 aa29.88■■■□□ 2.37
MECP2-216ENST00000627864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.88■■■□□ 2.37
MECP2-216ENST00000627864 HNRNPUL2Q1KMD3 747 aaKnown RBP29.88■■■□□ 2.37
MECP2-216ENST00000627864 EPRSP07814 1512 aaKnown RBP29.84■■■□□ 2.37
MECP2-216ENST00000627864 MAPKBP1O60336 1514 aa29.83■■■□□ 2.37
MECP2-216ENST00000627864 CDK13Q14004 1512 aaKnown RBP29.83■■■□□ 2.37
MECP2-216ENST00000627864 ASXL2Q76L83 1435 aa29.79■■■□□ 2.36
MECP2-216ENST00000627864 CCDC18Q5T9S5 1454 aa29.76■■■□□ 2.35
MECP2-216ENST00000627864 PLEKHD1A6NEE1 506 aa29.71■■■□□ 2.35
MECP2-216ENST00000627864 WDR7Q9Y4E6 1490 aa29.71■■■□□ 2.35
MECP2-216ENST00000627864 KIF13AQ9H1H9 1805 aa29.68■■■□□ 2.34
MECP2-216ENST00000627864 CDK11AQ9UQ88 783 aaPredicted RBP29.68■■■□□ 2.34
MECP2-216ENST00000627864 TRHP20396 242 aaPredicted RBP29.67■■■□□ 2.34
MECP2-216ENST00000627864 KCNH8Q96L42 1107 aa29.67■■■□□ 2.34
MECP2-216ENST00000627864 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
MECP2-216ENST00000627864 ABCC10Q5T3U5 1492 aa29.64■■■□□ 2.34
MECP2-216ENST00000627864 DIP2BQ9P265 1576 aa29.64■■■□□ 2.33
MECP2-216ENST00000627864 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
MECP2-216ENST00000627864 APLP2Q06481 763 aa29.61■■■□□ 2.33
MECP2-216ENST00000627864 FAM69CQ0P6D2 419 aa29.61■■■□□ 2.33
MECP2-216ENST00000627864 MAGI3Q5TCQ9 1506 aa29.58■■■□□ 2.33
MECP2-216ENST00000627864 TROQ12816 1431 aaPredicted RBP29.56■■■□□ 2.32
MECP2-216ENST00000627864 GLI2P10070 1586 aa29.56■■■□□ 2.32
MECP2-216ENST00000627864 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
MECP2-216ENST00000627864 MTUS2Q5JR59 1369 aa29.53■■■□□ 2.32
MECP2-216ENST00000627864 TSPOAP1O95153 1857 aa29.53■■■□□ 2.32
MECP2-216ENST00000627864 KIF14Q15058 1648 aa29.51■■■□□ 2.31
MECP2-216ENST00000627864 ABCA9Q8IUA7 1624 aa29.49■■■□□ 2.31
MECP2-216ENST00000627864 EHBP1L1Q8N3D4 1523 aa29.48■■■□□ 2.31
MECP2-216ENST00000627864 MAP3K4Q9Y6R4 1608 aa29.48■■■□□ 2.31
MECP2-216ENST00000627864 KANK4Q5T7N3 995 aaPredicted RBP29.46■■■□□ 2.31
MECP2-216ENST00000627864 LRRC9Q6ZRR7 1453 aa29.46■■■□□ 2.31
MECP2-216ENST00000627864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.45■■■□□ 2.31
MECP2-216ENST00000627864 TTC37Q6PGP7 1564 aa29.43■■■□□ 2.3
MECP2-216ENST00000627864 SUPT6HQ7KZ85 1726 aaKnown RBP29.41■■■□□ 2.3
MECP2-216ENST00000627864 CD109Q6YHK3 1445 aa29.4■■■□□ 2.3
MECP2-216ENST00000627864 MYO5CQ9NQX4 1742 aa29.39■■■□□ 2.3
MECP2-216ENST00000627864 PPRC1Q5VV67 1664 aaKnown RBP29.37■■■□□ 2.29
MECP2-216ENST00000627864 CDC42BPAQ5VT25 1732 aa29.33■■■□□ 2.29
MECP2-216ENST00000627864 NCOA2Q15596 1464 aa29.31■■■□□ 2.28
MECP2-216ENST00000627864 PPARGC1BQ86YN6 1023 aaKnown RBP29.31■■■□□ 2.28
MECP2-216ENST00000627864 CDC42BPBQ9Y5S2 1711 aa29.29■■■□□ 2.28
MECP2-216ENST00000627864 CCNB3Q8WWL7 1395 aa29.27■■■□□ 2.28
MECP2-216ENST00000627864 PLCH2O75038 1416 aa29.27■■■□□ 2.28
MECP2-216ENST00000627864 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
MECP2-216ENST00000627864 TEX14Q8IWB6 1497 aa29.26■■■□□ 2.27
MECP2-216ENST00000627864 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
MECP2-216ENST00000627864 GPATCH8Q9UKJ3 1502 aaKnown RBP29.23■■■□□ 2.27
MECP2-216ENST00000627864 ARHGAP5Q13017 1502 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms