RNA–Protein interactions for RNA: ENST00000626725.1

NSL1-206, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

TSL 2 BASIC

Gene NSL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-206ENST00000626725 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
NSL1-206ENST00000626725 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
NSL1-206ENST00000626725 IQGAP2Q13576 1575 aa18.47■□□□□ 0.55
NSL1-206ENST00000626725 OSCARQ8IYS5 282 aa18.47■□□□□ 0.55
NSL1-206ENST00000626725 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
NSL1-206ENST00000626725 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
NSL1-206ENST00000626725 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
NSL1-206ENST00000626725 KIAA0586Q9BVV6 1533 aa18.44■□□□□ 0.54
NSL1-206ENST00000626725 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
NSL1-206ENST00000626725 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
NSL1-206ENST00000626725 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
NSL1-206ENST00000626725 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
NSL1-206ENST00000626725 KIAA0556O60303 1618 aa18.35■□□□□ 0.53
NSL1-206ENST00000626725 SAMD9Q5K651 1589 aa18.35■□□□□ 0.53
NSL1-206ENST00000626725 DISP1Q96F81 1524 aa18.35■□□□□ 0.53
NSL1-206ENST00000626725 ARAP1Q96P48 1450 aa18.33■□□□□ 0.52
NSL1-206ENST00000626725 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
NSL1-206ENST00000626725 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.52
NSL1-206ENST00000626725 JPH4Q96JJ6 628 aa18.27■□□□□ 0.52
NSL1-206ENST00000626725 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
NSL1-206ENST00000626725 TNIKQ9UKE5 1360 aa18.2■□□□□ 0.5
NSL1-206ENST00000626725 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
NSL1-206ENST00000626725 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
NSL1-206ENST00000626725 FHOD3Q2V2M9 1422 aa18.17■□□□□ 0.5
NSL1-206ENST00000626725 ADCY10Q96PN6 1610 aa18.17■□□□□ 0.5
NSL1-206ENST00000626725 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
NSL1-206ENST00000626725 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
NSL1-206ENST00000626725 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
NSL1-206ENST00000626725 CARMIL2Q6F5E8 1435 aa18.13■□□□□ 0.49
NSL1-206ENST00000626725 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
NSL1-206ENST00000626725 ABCA8O94911 1581 aa18.12■□□□□ 0.49
NSL1-206ENST00000626725 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
NSL1-206ENST00000626725 PLB1Q6P1J6 1458 aa18.09■□□□□ 0.49
NSL1-206ENST00000626725 CLIP1P30622 1438 aa18.09■□□□□ 0.49
NSL1-206ENST00000626725 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.48
NSL1-206ENST00000626725 RAPGEF6Q8TEU7 1601 aa18.07■□□□□ 0.48
NSL1-206ENST00000626725 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
NSL1-206ENST00000626725 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
NSL1-206ENST00000626725 PTPRGP23470 1445 aa18.06■□□□□ 0.48
NSL1-206ENST00000626725 ABCC2Q92887 1545 aa18.05■□□□□ 0.48
NSL1-206ENST00000626725 ZCCHC11Q5TAX3 1644 aaKnown RBP18.02■□□□□ 0.48
NSL1-206ENST00000626725 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
NSL1-206ENST00000626725 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
NSL1-206ENST00000626725 NUP153P49790 1475 aaKnown RBP17.99■□□□□ 0.47
NSL1-206ENST00000626725 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
NSL1-206ENST00000626725 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
NSL1-206ENST00000626725 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
NSL1-206ENST00000626725 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
NSL1-206ENST00000626725 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
NSL1-206ENST00000626725 ATP10BO94823 1461 aa17.89■□□□□ 0.45
NSL1-206ENST00000626725 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
NSL1-206ENST00000626725 CASKIN1Q8WXD9 1431 aa17.89■□□□□ 0.45
NSL1-206ENST00000626725 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
NSL1-206ENST00000626725 MAPKBP1O60336 1514 aa17.88■□□□□ 0.45
NSL1-206ENST00000626725 ARID3CA6NKF2 412 aa17.87■□□□□ 0.45
NSL1-206ENST00000626725 VPS8Q8N3P4 1428 aa17.87■□□□□ 0.45
NSL1-206ENST00000626725 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
NSL1-206ENST00000626725 MAGI3Q5TCQ9 1506 aa17.87■□□□□ 0.45
NSL1-206ENST00000626725 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
NSL1-206ENST00000626725 DIP2BQ9P265 1576 aa17.84■□□□□ 0.45
NSL1-206ENST00000626725 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
NSL1-206ENST00000626725 KIF14Q15058 1648 aa17.8■□□□□ 0.44
NSL1-206ENST00000626725 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
NSL1-206ENST00000626725 PPRC1Q5VV67 1664 aaKnown RBP17.77■□□□□ 0.43
NSL1-206ENST00000626725 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
NSL1-206ENST00000626725 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
NSL1-206ENST00000626725 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
NSL1-206ENST00000626725 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
NSL1-206ENST00000626725 MAP3K4Q9Y6R4 1608 aa17.73■□□□□ 0.43
NSL1-206ENST00000626725 ABCC10Q5T3U5 1492 aa17.72■□□□□ 0.43
NSL1-206ENST00000626725 ATP1B4Q9UN42 357 aaPredicted RBP17.71■□□□□ 0.43
NSL1-206ENST00000626725 ABCA9Q8IUA7 1624 aa17.71■□□□□ 0.43
NSL1-206ENST00000626725 GLI2P10070 1586 aa17.7■□□□□ 0.42
NSL1-206ENST00000626725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
NSL1-206ENST00000626725 CDC42BPAQ5VT25 1732 aa17.67■□□□□ 0.42
NSL1-206ENST00000626725 MAP3K1Q13233 1512 aa17.66■□□□□ 0.42
NSL1-206ENST00000626725 EHBP1L1Q8N3D4 1523 aa17.66■□□□□ 0.42
NSL1-206ENST00000626725 TROQ12816 1431 aaPredicted RBP17.65■□□□□ 0.42
NSL1-206ENST00000626725 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
NSL1-206ENST00000626725 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.41
NSL1-206ENST00000626725 CDC42BPBQ9Y5S2 1711 aa17.64■□□□□ 0.41
NSL1-206ENST00000626725 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
NSL1-206ENST00000626725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
NSL1-206ENST00000626725 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
NSL1-206ENST00000626725 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
NSL1-206ENST00000626725 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
NSL1-206ENST00000626725 PREX2Q70Z35 1606 aa17.61■□□□□ 0.41
NSL1-206ENST00000626725 KCNH8Q96L42 1107 aa17.58■□□□□ 0.4
NSL1-206ENST00000626725 FAM69CQ0P6D2 419 aa17.56■□□□□ 0.4
NSL1-206ENST00000626725 NCOA2Q15596 1464 aa17.55■□□□□ 0.4
NSL1-206ENST00000626725 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
NSL1-206ENST00000626725 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
NSL1-206ENST00000626725 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
NSL1-206ENST00000626725 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.4
NSL1-206ENST00000626725 SAMD9LQ8IVG5 1584 aa17.5■□□□□ 0.39
NSL1-206ENST00000626725 CD109Q6YHK3 1445 aa17.5■□□□□ 0.39
NSL1-206ENST00000626725 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
NSL1-206ENST00000626725 PPARGC1BQ86YN6 1023 aaKnown RBP17.48■□□□□ 0.39
NSL1-206ENST00000626725 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
NSL1-206ENST00000626725 FRMPD1Q5SYB0 1578 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms