RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CHD1O14646 1710 aa30.58■■■□□ 2.49
TREX1-205ENST00000625293 CHMP7Q8WUX9 453 aaPredicted RBP30.57■■■□□ 2.48
TREX1-205ENST00000625293 ARAP1Q96P48 1450 aa30.57■■■□□ 2.48
TREX1-205ENST00000625293 MAGI1Q96QZ7 1491 aaPredicted RBP30.54■■■□□ 2.48
TREX1-205ENST00000625293 CUL7Q14999 1698 aa30.52■■■□□ 2.48
TREX1-205ENST00000625293 RANGAP1P46060 587 aaPredicted RBP30.48■■■□□ 2.47
TREX1-205ENST00000625293 SYNJ2O15056 1496 aa30.47■■■□□ 2.47
TREX1-205ENST00000625293 ARHGAP35Q9NRY4 1499 aa30.46■■■□□ 2.47
TREX1-205ENST00000625293 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
TREX1-205ENST00000625293 FHAD1B1AJZ9 1412 aa30.35■■■□□ 2.45
TREX1-205ENST00000625293 TTBK1Q5TCY1 1321 aaPredicted RBP30.31■■■□□ 2.44
TREX1-205ENST00000625293 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
TREX1-205ENST00000625293 APLP2Q06481 763 aa30.25■■■□□ 2.43
TREX1-205ENST00000625293 CTTNBP2Q8WZ74 1663 aa30.22■■■□□ 2.43
TREX1-205ENST00000625293 CLASP1Q7Z460 1538 aa30.21■■■□□ 2.43
TREX1-205ENST00000625293 CEP170Q5SW79 1584 aa30.19■■■□□ 2.42
TREX1-205ENST00000625293 EFCAB5A4FU69 1503 aa30.17■■■□□ 2.42
TREX1-205ENST00000625293 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
TREX1-205ENST00000625293 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
TREX1-205ENST00000625293 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
TREX1-205ENST00000625293 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
TREX1-205ENST00000625293 NUP160Q12769 1436 aa30.16■■■□□ 2.42
TREX1-205ENST00000625293 MAP3K1Q13233 1512 aa30.07■■■□□ 2.4
TREX1-205ENST00000625293 ZEB1P37275 1124 aaPredicted RBP30.07■■■□□ 2.4
TREX1-205ENST00000625293 KANK4Q5T7N3 995 aaPredicted RBP30.05■■■□□ 2.4
TREX1-205ENST00000625293 CYB5RLQ6IPT4 315 aa30.05■■■□□ 2.4
TREX1-205ENST00000625293 SAMD9Q5K651 1589 aa30.01■■■□□ 2.39
TREX1-205ENST00000625293 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.39
TREX1-205ENST00000625293 TIAM1Q13009 1591 aa29.98■■■□□ 2.39
TREX1-205ENST00000625293 JPH4Q96JJ6 628 aa29.98■■■□□ 2.39
TREX1-205ENST00000625293 PCF11O94913 1555 aaKnown RBP29.97■■■□□ 2.39
TREX1-205ENST00000625293 ERCC6L2Q5T890 1561 aa29.97■■■□□ 2.39
TREX1-205ENST00000625293 P3H3Q8IVL6 736 aa29.94■■■□□ 2.38
TREX1-205ENST00000625293 FYCO1Q9BQS8 1478 aa29.92■■■□□ 2.38
TREX1-205ENST00000625293 CASKIN1Q8WXD9 1431 aa29.9■■■□□ 2.38
TREX1-205ENST00000625293 KIAA0586Q9BVV6 1533 aa29.88■■■□□ 2.37
TREX1-205ENST00000625293 CFAP43Q8NDM7 1665 aa29.88■■■□□ 2.37
TREX1-205ENST00000625293 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
TREX1-205ENST00000625293 SHROOM2Q13796 1616 aa29.87■■■□□ 2.37
TREX1-205ENST00000625293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.87■■■□□ 2.37
TREX1-205ENST00000625293 PRG4Q92954 1404 aaPredicted RBP29.87■■■□□ 2.37
TREX1-205ENST00000625293 RRBP1Q9P2E9 1410 aaKnown RBP29.87■■■□□ 2.37
TREX1-205ENST00000625293 LRRC9Q6ZRR7 1453 aa29.85■■■□□ 2.37
TREX1-205ENST00000625293 IQGAP2Q13576 1575 aa29.84■■■□□ 2.37
TREX1-205ENST00000625293 CCER1Q8TC90 406 aaPredicted RBP29.77■■■□□ 2.36
TREX1-205ENST00000625293 HNRNPUL2Q1KMD3 747 aaKnown RBP29.75■■■□□ 2.35
TREX1-205ENST00000625293 UGGT2Q9NYU1 1516 aa29.75■■■□□ 2.35
TREX1-205ENST00000625293 CCNB3Q8WWL7 1395 aa29.69■■■□□ 2.34
TREX1-205ENST00000625293 PHLDB1Q86UU1 1377 aa29.63■■■□□ 2.33
TREX1-205ENST00000625293 ATP1B4Q9UN42 357 aaPredicted RBP29.62■■■□□ 2.33
TREX1-205ENST00000625293 LRRIQ1Q96JM4 1722 aa29.61■■■□□ 2.33
TREX1-205ENST00000625293 DISP1Q96F81 1524 aa29.58■■■□□ 2.33
TREX1-205ENST00000625293 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
TREX1-205ENST00000625293 CARMIL2Q6F5E8 1435 aa29.53■■■□□ 2.32
TREX1-205ENST00000625293 HECW1Q76N89 1606 aa29.52■■■□□ 2.32
TREX1-205ENST00000625293 CCDC18Q5T9S5 1454 aa29.51■■■□□ 2.31
TREX1-205ENST00000625293 PTPRGP23470 1445 aa29.5■■■□□ 2.31
TREX1-205ENST00000625293 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.31
TREX1-205ENST00000625293 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.31
TREX1-205ENST00000625293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.43■■■□□ 2.3
TREX1-205ENST00000625293 EPRSP07814 1512 aaKnown RBP29.42■■■□□ 2.3
TREX1-205ENST00000625293 MAGI3Q5TCQ9 1506 aa29.41■■■□□ 2.3
TREX1-205ENST00000625293 TRHP20396 242 aaPredicted RBP29.39■■■□□ 2.3
TREX1-205ENST00000625293 NCOA2Q15596 1464 aa29.37■■■□□ 2.29
TREX1-205ENST00000625293 ADCY10Q96PN6 1610 aa29.36■■■□□ 2.29
TREX1-205ENST00000625293 FGD6Q6ZV73 1430 aa29.35■■■□□ 2.29
TREX1-205ENST00000625293 SUPT6HQ7KZ85 1726 aaKnown RBP29.35■■■□□ 2.29
TREX1-205ENST00000625293 CDK13Q14004 1512 aaKnown RBP29.32■■■□□ 2.28
TREX1-205ENST00000625293 DHX57Q6P158 1386 aaKnown RBP29.31■■■□□ 2.28
TREX1-205ENST00000625293 RAPGEF6Q8TEU7 1601 aa29.3■■■□□ 2.28
TREX1-205ENST00000625293 NUP153P49790 1475 aaKnown RBP29.29■■■□□ 2.28
TREX1-205ENST00000625293 MYOM3Q5VTT5 1437 aa29.29■■■□□ 2.28
TREX1-205ENST00000625293 NPM1P06748 294 aaKnown RBP eCLIP29.28■■■□□ 2.28
TREX1-205ENST00000625293 ITGAEP38570 1179 aa29.28■■■□□ 2.28
TREX1-205ENST00000625293 FAM50AQ14320 339 aaKnown RBP29.28■■■□□ 2.28
TREX1-205ENST00000625293 UACAQ9BZF9 1416 aa29.27■■■□□ 2.28
TREX1-205ENST00000625293 CLSPNQ9HAW4 1339 aa29.27■■■□□ 2.28
TREX1-205ENST00000625293 PLB1Q6P1J6 1458 aa29.26■■■□□ 2.27
TREX1-205ENST00000625293 RAB3GAP2Q9H2M9 1393 aa29.21■■■□□ 2.27
TREX1-205ENST00000625293 SETD5Q9C0A6 1442 aa29.2■■■□□ 2.27
TREX1-205ENST00000625293 ARID3CA6NKF2 412 aa29.18■■■□□ 2.26
TREX1-205ENST00000625293 ABCC2Q92887 1545 aa29.17■■■□□ 2.26
TREX1-205ENST00000625293 UHRF1BP1LA0JNW5 1464 aa29.17■■■□□ 2.26
TREX1-205ENST00000625293 TCOF1Q13428 1488 aaKnown RBP29.15■■■□□ 2.26
TREX1-205ENST00000625293 PTPN23Q9H3S7 1636 aa29.13■■■□□ 2.25
TREX1-205ENST00000625293 ABCA8O94911 1581 aa29.12■■■□□ 2.25
TREX1-205ENST00000625293 PTPRKQ15262 1439 aa29.1■■■□□ 2.25
TREX1-205ENST00000625293 MIA2Q96PC5 1412 aa29.1■■■□□ 2.25
TREX1-205ENST00000625293 KDM5BQ9UGL1 1544 aa29.08■■■□□ 2.25
TREX1-205ENST00000625293 MAPKBP1O60336 1514 aa29.07■■■□□ 2.24
TREX1-205ENST00000625293 FAM69CQ0P6D2 419 aa29.06■■■□□ 2.24
TREX1-205ENST00000625293 ASXL2Q76L83 1435 aa29.04■■■□□ 2.24
TREX1-205ENST00000625293 CDK11AQ9UQ88 783 aaPredicted RBP29.03■■■□□ 2.24
TREX1-205ENST00000625293 ZCCHC11Q5TAX3 1644 aaKnown RBP29.03■■■□□ 2.24
TREX1-205ENST00000625293 TROQ12816 1431 aaPredicted RBP29.03■■■□□ 2.24
TREX1-205ENST00000625293 HFM1A2PYH4 1435 aa29.01■■■□□ 2.23
TREX1-205ENST00000625293 ABCC10Q5T3U5 1492 aa29■■■□□ 2.23
TREX1-205ENST00000625293 KIF13AQ9H1H9 1805 aa28.99■■■□□ 2.23
TREX1-205ENST00000625293 ATP10BO94823 1461 aa28.97■■■□□ 2.23
TREX1-205ENST00000625293 DIP2BQ9P265 1576 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms