RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
ATRX-213ENST00000624032 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
ATRX-213ENST00000624032 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
ATRX-213ENST00000624032 CLIP1P30622 1438 aa18.06■□□□□ 0.48
ATRX-213ENST00000624032 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
ATRX-213ENST00000624032 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
ATRX-213ENST00000624032 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
ATRX-213ENST00000624032 CHD1O14646 1710 aa17.99■□□□□ 0.47
ATRX-213ENST00000624032 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
ATRX-213ENST00000624032 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
ATRX-213ENST00000624032 ARHGAP35Q9NRY4 1499 aa17.96■□□□□ 0.47
ATRX-213ENST00000624032 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
ATRX-213ENST00000624032 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
ATRX-213ENST00000624032 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
ATRX-213ENST00000624032 NUP160Q12769 1436 aa17.92■□□□□ 0.46
ATRX-213ENST00000624032 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
ATRX-213ENST00000624032 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
ATRX-213ENST00000624032 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
ATRX-213ENST00000624032 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
ATRX-213ENST00000624032 SAMD9Q5K651 1589 aa17.83■□□□□ 0.45
ATRX-213ENST00000624032 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.45
ATRX-213ENST00000624032 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
ATRX-213ENST00000624032 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
ATRX-213ENST00000624032 DISP1Q96F81 1524 aa17.79■□□□□ 0.44
ATRX-213ENST00000624032 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
ATRX-213ENST00000624032 ATP1B4Q9UN42 357 aaPredicted RBP17.75■□□□□ 0.43
ATRX-213ENST00000624032 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
ATRX-213ENST00000624032 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
ATRX-213ENST00000624032 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
ATRX-213ENST00000624032 PCF11O94913 1555 aaKnown RBP17.71■□□□□ 0.42
ATRX-213ENST00000624032 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
ATRX-213ENST00000624032 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
ATRX-213ENST00000624032 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
ATRX-213ENST00000624032 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
ATRX-213ENST00000624032 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
ATRX-213ENST00000624032 APLP2Q06481 763 aa17.69■□□□□ 0.42
ATRX-213ENST00000624032 CASKIN1Q8WXD9 1431 aa17.65■□□□□ 0.42
ATRX-213ENST00000624032 ARID3CA6NKF2 412 aa17.64■□□□□ 0.41
ATRX-213ENST00000624032 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
ATRX-213ENST00000624032 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
ATRX-213ENST00000624032 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
ATRX-213ENST00000624032 LRRIQ1Q96JM4 1722 aa17.59■□□□□ 0.41
ATRX-213ENST00000624032 PTPRGP23470 1445 aa17.59■□□□□ 0.41
ATRX-213ENST00000624032 TIAM1Q13009 1591 aa17.57■□□□□ 0.4
ATRX-213ENST00000624032 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
ATRX-213ENST00000624032 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
ATRX-213ENST00000624032 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
ATRX-213ENST00000624032 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
ATRX-213ENST00000624032 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.4
ATRX-213ENST00000624032 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.39
ATRX-213ENST00000624032 ABCA8O94911 1581 aa17.51■□□□□ 0.39
ATRX-213ENST00000624032 MAP3K1Q13233 1512 aa17.51■□□□□ 0.39
ATRX-213ENST00000624032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
ATRX-213ENST00000624032 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
ATRX-213ENST00000624032 LRRC9Q6ZRR7 1453 aa17.5■□□□□ 0.39
ATRX-213ENST00000624032 UACAQ9BZF9 1416 aa17.47■□□□□ 0.39
ATRX-213ENST00000624032 CCDC18Q5T9S5 1454 aa17.46■□□□□ 0.39
ATRX-213ENST00000624032 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
ATRX-213ENST00000624032 MTUS2Q5JR59 1369 aa17.44■□□□□ 0.38
ATRX-213ENST00000624032 ATP10BO94823 1461 aa17.43■□□□□ 0.38
ATRX-213ENST00000624032 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
ATRX-213ENST00000624032 ABCC2Q92887 1545 aa17.4■□□□□ 0.38
ATRX-213ENST00000624032 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.37
ATRX-213ENST00000624032 PHLDB1Q86UU1 1377 aa17.37■□□□□ 0.37
ATRX-213ENST00000624032 EHBP1L1Q8N3D4 1523 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
ATRX-213ENST00000624032 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
ATRX-213ENST00000624032 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
ATRX-213ENST00000624032 ZCCHC11Q5TAX3 1644 aaKnown RBP17.31■□□□□ 0.36
ATRX-213ENST00000624032 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
ATRX-213ENST00000624032 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
ATRX-213ENST00000624032 KIF14Q15058 1648 aa17.29■□□□□ 0.36
ATRX-213ENST00000624032 MYT1Q01538 1121 aa17.28■□□□□ 0.36
ATRX-213ENST00000624032 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.35
ATRX-213ENST00000624032 KCNH8Q96L42 1107 aa17.27■□□□□ 0.35
ATRX-213ENST00000624032 RRBP1Q9P2E9 1410 aaKnown RBP17.26■□□□□ 0.35
ATRX-213ENST00000624032 CCNB3Q8WWL7 1395 aa17.25■□□□□ 0.35
ATRX-213ENST00000624032 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
ATRX-213ENST00000624032 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
ATRX-213ENST00000624032 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
ATRX-213ENST00000624032 ITGAEP38570 1179 aa17.23■□□□□ 0.35
ATRX-213ENST00000624032 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATRX-213ENST00000624032 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
ATRX-213ENST00000624032 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
ATRX-213ENST00000624032 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
ATRX-213ENST00000624032 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
ATRX-213ENST00000624032 ASXL2Q76L83 1435 aa17.18■□□□□ 0.34
ATRX-213ENST00000624032 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
ATRX-213ENST00000624032 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
ATRX-213ENST00000624032 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
ATRX-213ENST00000624032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATRX-213ENST00000624032 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms