RNA–Protein interactions for RNA: ENST00000623487.1

HMCN2-205, Transcript of hemicentin 2, humanhuman

TSL 2

Gene HMCN2, Length 4,014 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2-205ENST00000623487 TSPY4P0CV99 314 aa17.35■□□□□ 0.37
HMCN2-205ENST00000623487 TSPY10P0CW01 314 aa17.35■□□□□ 0.37
HMCN2-205ENST00000623487 NESP48681 1621 aa17.35■□□□□ 0.37
HMCN2-205ENST00000623487 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
HMCN2-205ENST00000623487 EEA1Q15075 1411 aa17.34■□□□□ 0.37
HMCN2-205ENST00000623487 KANK4Q5T7N3 995 aaPredicted RBP17.33■□□□□ 0.37
HMCN2-205ENST00000623487 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.37
HMCN2-205ENST00000623487 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.36
HMCN2-205ENST00000623487 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
HMCN2-205ENST00000623487 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
HMCN2-205ENST00000623487 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
HMCN2-205ENST00000623487 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
HMCN2-205ENST00000623487 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
HMCN2-205ENST00000623487 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
HMCN2-205ENST00000623487 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
HMCN2-205ENST00000623487 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
HMCN2-205ENST00000623487 NCAPD3P42695 1498 aa17.23■□□□□ 0.35
HMCN2-205ENST00000623487 RGL3Q3MIN7 710 aa17.21■□□□□ 0.35
HMCN2-205ENST00000623487 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
HMCN2-205ENST00000623487 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
HMCN2-205ENST00000623487 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
HMCN2-205ENST00000623487 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
HMCN2-205ENST00000623487 CC2D2AQ9P2K1 1620 aa17.16■□□□□ 0.34
HMCN2-205ENST00000623487 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.34
HMCN2-205ENST00000623487 MLECQ14165 292 aa17.14■□□□□ 0.33
HMCN2-205ENST00000623487 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
HMCN2-205ENST00000623487 ZNF316A6NFI3 1004 aaPredicted RBP17.13■□□□□ 0.33
HMCN2-205ENST00000623487 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
HMCN2-205ENST00000623487 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
HMCN2-205ENST00000623487 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
HMCN2-205ENST00000623487 ANP32EQ9BTT0 268 aa17.12■□□□□ 0.33
HMCN2-205ENST00000623487 NEFLP07196 543 aa17.11■□□□□ 0.33
HMCN2-205ENST00000623487 DDX10Q13206 875 aaKnown RBP17.1■□□□□ 0.33
HMCN2-205ENST00000623487 FGD5Q6ZNL6 1462 aa17.1■□□□□ 0.33
HMCN2-205ENST00000623487 FOXD1Q16676 465 aa17.07■□□□□ 0.32
HMCN2-205ENST00000623487 IGF1RP08069 1367 aa17.07■□□□□ 0.32
HMCN2-205ENST00000623487 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
HMCN2-205ENST00000623487 SENP3-EIF4A1A0A087X0R7 540 aa17.05■□□□□ 0.32
HMCN2-205ENST00000623487 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.32
HMCN2-205ENST00000623487 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
HMCN2-205ENST00000623487 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
HMCN2-205ENST00000623487 ANP32CO43423 234 aa17■□□□□ 0.31
HMCN2-205ENST00000623487 GGT6Q6P531 493 aa16.99■□□□□ 0.31
HMCN2-205ENST00000623487 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
HMCN2-205ENST00000623487 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
HMCN2-205ENST00000623487 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
HMCN2-205ENST00000623487 SALL2Q9Y467 1007 aaPredicted RBP16.97■□□□□ 0.31
HMCN2-205ENST00000623487 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
HMCN2-205ENST00000623487 CFTRP13569 1480 aa16.96■□□□□ 0.31
HMCN2-205ENST00000623487 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
HMCN2-205ENST00000623487 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
HMCN2-205ENST00000623487 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
HMCN2-205ENST00000623487 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
HMCN2-205ENST00000623487 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
HMCN2-205ENST00000623487 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
HMCN2-205ENST00000623487 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
HMCN2-205ENST00000623487 PTPRGP23470 1445 aa16.84■□□□□ 0.29
HMCN2-205ENST00000623487 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
HMCN2-205ENST00000623487 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
HMCN2-205ENST00000623487 CUX1P39880 1505 aa16.81■□□□□ 0.28
HMCN2-205ENST00000623487 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
HMCN2-205ENST00000623487 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
HMCN2-205ENST00000623487 POLA1P09884 1462 aaPredicted RBP16.79■□□□□ 0.28
HMCN2-205ENST00000623487 PKD2Q13563 968 aa16.79■□□□□ 0.28
HMCN2-205ENST00000623487 SAFB2Q14151 953 aaKnown RBP eCLIP16.79■□□□□ 0.28
HMCN2-205ENST00000623487 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
HMCN2-205ENST00000623487 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
HMCN2-205ENST00000623487 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
HMCN2-205ENST00000623487 KIF3BO15066 747 aa16.78■□□□□ 0.28
HMCN2-205ENST00000623487 MIER1Q8N108 512 aa16.78■□□□□ 0.28
HMCN2-205ENST00000623487 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
HMCN2-205ENST00000623487 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
HMCN2-205ENST00000623487 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
HMCN2-205ENST00000623487 ARHGAP35Q9NRY4 1499 aa16.75■□□□□ 0.27
HMCN2-205ENST00000623487 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
HMCN2-205ENST00000623487 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
HMCN2-205ENST00000623487 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
HMCN2-205ENST00000623487 RAB3GAP2Q9H2M9 1393 aa16.7■□□□□ 0.26
HMCN2-205ENST00000623487 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
HMCN2-205ENST00000623487 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
HMCN2-205ENST00000623487 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
HMCN2-205ENST00000623487 NUP155O75694 1391 aa16.69■□□□□ 0.26
HMCN2-205ENST00000623487 MPHOSPH9Q99550 1183 aa16.68■□□□□ 0.26
HMCN2-205ENST00000623487 UBE2Q2Q8WVN8 375 aa16.67■□□□□ 0.26
HMCN2-205ENST00000623487 STK26Q9P289 416 aa16.67■□□□□ 0.26
HMCN2-205ENST00000623487 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
HMCN2-205ENST00000623487 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
HMCN2-205ENST00000623487 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
HMCN2-205ENST00000623487 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
HMCN2-205ENST00000623487 SETD5Q9C0A6 1442 aa16.64■□□□□ 0.25
HMCN2-205ENST00000623487 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
HMCN2-205ENST00000623487 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
HMCN2-205ENST00000623487 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
HMCN2-205ENST00000623487 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
HMCN2-205ENST00000623487 ARAP1Q96P48 1450 aa16.62■□□□□ 0.25
HMCN2-205ENST00000623487 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
HMCN2-205ENST00000623487 SNAPC4Q5SXM2 1469 aa16.62■□□□□ 0.25
HMCN2-205ENST00000623487 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
HMCN2-205ENST00000623487 A0A0U1RQG5 324 aaPredicted RBP16.61■□□□□ 0.25
HMCN2-205ENST00000623487 KIF21BO75037 1637 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms