RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 CLASP1Q7Z460 1538 aa21.42■■□□□ 1.02
TRIM39-RPP21-201ENST00000623385 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
TRIM39-RPP21-201ENST00000623385 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
TRIM39-RPP21-201ENST00000623385 CTTNBP2Q8WZ74 1663 aa21.37■■□□□ 1.01
TRIM39-RPP21-201ENST00000623385 IQGAP2Q13576 1575 aa21.35■■□□□ 1.01
TRIM39-RPP21-201ENST00000623385 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
TRIM39-RPP21-201ENST00000623385 JPH4Q96JJ6 628 aa21.31■■□□□ 1
TRIM39-RPP21-201ENST00000623385 SHROOM2Q13796 1616 aa21.29■■□□□ 1
TRIM39-RPP21-201ENST00000623385 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
TRIM39-RPP21-201ENST00000623385 UGGT2Q9NYU1 1516 aa21.26■□□□□ 0.99
TRIM39-RPP21-201ENST00000623385 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
TRIM39-RPP21-201ENST00000623385 DISP1Q96F81 1524 aa21.22■□□□□ 0.99
TRIM39-RPP21-201ENST00000623385 PRG4Q92954 1404 aaPredicted RBP21.22■□□□□ 0.99
TRIM39-RPP21-201ENST00000623385 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
TRIM39-RPP21-201ENST00000623385 SAMD9Q5K651 1589 aa21.17■□□□□ 0.98
TRIM39-RPP21-201ENST00000623385 ARHGAP35Q9NRY4 1499 aa21.17■□□□□ 0.98
TRIM39-RPP21-201ENST00000623385 P3H3Q8IVL6 736 aa21.16■□□□□ 0.98
TRIM39-RPP21-201ENST00000623385 CLIP1P30622 1438 aa21.15■□□□□ 0.98
TRIM39-RPP21-201ENST00000623385 KIAA0556O60303 1618 aa21.15■□□□□ 0.98
TRIM39-RPP21-201ENST00000623385 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 EFCAB5A4FU69 1503 aa21.12■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
TRIM39-RPP21-201ENST00000623385 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
TRIM39-RPP21-201ENST00000623385 PTPRGP23470 1445 aa21.02■□□□□ 0.96
TRIM39-RPP21-201ENST00000623385 PLB1Q6P1J6 1458 aa20.95■□□□□ 0.94
TRIM39-RPP21-201ENST00000623385 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
TRIM39-RPP21-201ENST00000623385 FMN1Q68DA7 1419 aa20.92■□□□□ 0.94
TRIM39-RPP21-201ENST00000623385 ABCA8O94911 1581 aa20.91■□□□□ 0.94
TRIM39-RPP21-201ENST00000623385 UACAQ9BZF9 1416 aa20.89■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 VPS8Q8N3P4 1428 aa20.88■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 PCF11O94913 1555 aaKnown RBP20.86■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 RAPGEF6Q8TEU7 1601 aa20.86■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 ADCY10Q96PN6 1610 aa20.86■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 CASKIN1Q8WXD9 1431 aa20.84■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 UHRF1BP1LA0JNW5 1464 aa20.84■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 NUP153P49790 1475 aaKnown RBP20.84■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 ABCC2Q92887 1545 aa20.84■□□□□ 0.93
TRIM39-RPP21-201ENST00000623385 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
TRIM39-RPP21-201ENST00000623385 FYCO1Q9BQS8 1478 aa20.8■□□□□ 0.92
TRIM39-RPP21-201ENST00000623385 ATP1B4Q9UN42 357 aaPredicted RBP20.8■□□□□ 0.92
TRIM39-RPP21-201ENST00000623385 LRRIQ1Q96JM4 1722 aa20.77■□□□□ 0.91
TRIM39-RPP21-201ENST00000623385 HECW1Q76N89 1606 aa20.76■□□□□ 0.91
TRIM39-RPP21-201ENST00000623385 ATP10BO94823 1461 aa20.76■□□□□ 0.91
TRIM39-RPP21-201ENST00000623385 KDM5BQ9UGL1 1544 aa20.75■□□□□ 0.91
TRIM39-RPP21-201ENST00000623385 EPRSP07814 1512 aaKnown RBP20.74■□□□□ 0.91
TRIM39-RPP21-201ENST00000623385 CDK13Q14004 1512 aaKnown RBP20.74■□□□□ 0.91
TRIM39-RPP21-201ENST00000623385 ZCCHC11Q5TAX3 1644 aaKnown RBP20.71■□□□□ 0.91
TRIM39-RPP21-201ENST00000623385 CCDC18Q5T9S5 1454 aa20.67■□□□□ 0.9
TRIM39-RPP21-201ENST00000623385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
TRIM39-RPP21-201ENST00000623385 HNRNPUL2Q1KMD3 747 aaKnown RBP20.65■□□□□ 0.9
TRIM39-RPP21-201ENST00000623385 NPM1P06748 294 aaKnown RBP eCLIP20.64■□□□□ 0.9
TRIM39-RPP21-201ENST00000623385 MAGI3Q5TCQ9 1506 aa20.64■□□□□ 0.89
TRIM39-RPP21-201ENST00000623385 TIAM1Q13009 1591 aa20.64■□□□□ 0.89
TRIM39-RPP21-201ENST00000623385 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
TRIM39-RPP21-201ENST00000623385 MAP3K1Q13233 1512 aa20.61■□□□□ 0.89
TRIM39-RPP21-201ENST00000623385 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
TRIM39-RPP21-201ENST00000623385 ASXL2Q76L83 1435 aa20.61■□□□□ 0.89
TRIM39-RPP21-201ENST00000623385 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
TRIM39-RPP21-201ENST00000623385 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 APLP2Q06481 763 aa20.56■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 WDR7Q9Y4E6 1490 aa20.56■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 TROQ12816 1431 aaPredicted RBP20.54■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 PPARGC1BQ86YN6 1023 aaKnown RBP20.54■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 CDK11AQ9UQ88 783 aaPredicted RBP20.54■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 MTUS2Q5JR59 1369 aa20.52■□□□□ 0.88
TRIM39-RPP21-201ENST00000623385 KCNH8Q96L42 1107 aa20.51■□□□□ 0.87
TRIM39-RPP21-201ENST00000623385 EHBP1L1Q8N3D4 1523 aa20.49■□□□□ 0.87
TRIM39-RPP21-201ENST00000623385 KIF14Q15058 1648 aa20.49■□□□□ 0.87
TRIM39-RPP21-201ENST00000623385 ABCC10Q5T3U5 1492 aa20.46■□□□□ 0.87
TRIM39-RPP21-201ENST00000623385 DIP2BQ9P265 1576 aa20.44■□□□□ 0.86
TRIM39-RPP21-201ENST00000623385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRIM39-RPP21-201ENST00000623385 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
TRIM39-RPP21-201ENST00000623385 TTC37Q6PGP7 1564 aa20.41■□□□□ 0.86
TRIM39-RPP21-201ENST00000623385 FAM69CQ0P6D2 419 aa20.4■□□□□ 0.86
TRIM39-RPP21-201ENST00000623385 SUPT6HQ7KZ85 1726 aaKnown RBP20.4■□□□□ 0.86
TRIM39-RPP21-201ENST00000623385 GLI2P10070 1586 aa20.39■□□□□ 0.85
TRIM39-RPP21-201ENST00000623385 ABCA9Q8IUA7 1624 aa20.39■□□□□ 0.85
TRIM39-RPP21-201ENST00000623385 KIF13AQ9H1H9 1805 aa20.37■□□□□ 0.85
TRIM39-RPP21-201ENST00000623385 PHLDB1Q86UU1 1377 aa20.36■□□□□ 0.85
TRIM39-RPP21-201ENST00000623385 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
TRIM39-RPP21-201ENST00000623385 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
TRIM39-RPP21-201ENST00000623385 CD109Q6YHK3 1445 aa20.32■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 PLCH2O75038 1416 aa20.3■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 MYOM3Q5VTT5 1437 aa20.28■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 MYO5CQ9NQX4 1742 aa20.27■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 CDC42BPBQ9Y5S2 1711 aa20.27■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 PREX2Q70Z35 1606 aa20.27■□□□□ 0.84
TRIM39-RPP21-201ENST00000623385 PPRC1Q5VV67 1664 aaKnown RBP20.26■□□□□ 0.83
TRIM39-RPP21-201ENST00000623385 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
TRIM39-RPP21-201ENST00000623385 ARAP3Q8WWN8 1544 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms