RNA–Protein interactions for RNA: ENST00000623384.1

LPCAT4-210, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

Gene LPCAT4, Length 1,349 nt, Biotype TEC, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-210ENST00000623384 HOXD11P31277 338 aaPredicted RBP22.69■■□□□ 1.22
LPCAT4-210ENST00000623384 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
LPCAT4-210ENST00000623384 CUX1P39880 1505 aa22.66■■□□□ 1.22
LPCAT4-210ENST00000623384 SYNJ2O15056 1496 aa22.63■■□□□ 1.21
LPCAT4-210ENST00000623384 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
LPCAT4-210ENST00000623384 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
LPCAT4-210ENST00000623384 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
LPCAT4-210ENST00000623384 SLC4A2P04920 1241 aa22.54■■□□□ 1.2
LPCAT4-210ENST00000623384 ABCA10Q8WWZ4 1543 aa22.49■■□□□ 1.19
LPCAT4-210ENST00000623384 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
LPCAT4-210ENST00000623384 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
LPCAT4-210ENST00000623384 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
LPCAT4-210ENST00000623384 GRIN2AQ12879 1464 aa22.37■■□□□ 1.17
LPCAT4-210ENST00000623384 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
LPCAT4-210ENST00000623384 NUP160Q12769 1436 aa22.28■■□□□ 1.16
LPCAT4-210ENST00000623384 TOP2BQ02880 1626 aa22.25■■□□□ 1.15
LPCAT4-210ENST00000623384 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
LPCAT4-210ENST00000623384 MYCNP04198 464 aaPredicted RBP22.24■■□□□ 1.15
LPCAT4-210ENST00000623384 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
LPCAT4-210ENST00000623384 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
LPCAT4-210ENST00000623384 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
LPCAT4-210ENST00000623384 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
LPCAT4-210ENST00000623384 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.15
LPCAT4-210ENST00000623384 NPM1P06748 294 aaKnown RBP eCLIP22.18■■□□□ 1.14
LPCAT4-210ENST00000623384 PRG4Q92954 1404 aaPredicted RBP22.17■■□□□ 1.14
LPCAT4-210ENST00000623384 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
LPCAT4-210ENST00000623384 ATXN8OSP0DMR3 200 aa22.1■■□□□ 1.13
LPCAT4-210ENST00000623384 FAM69CQ0P6D2 419 aa22.05■■□□□ 1.12
LPCAT4-210ENST00000623384 DCAF8L1A6NGE4 600 aa21.98■■□□□ 1.11
LPCAT4-210ENST00000623384 KIF27Q86VH2 1401 aa21.95■■□□□ 1.11
LPCAT4-210ENST00000623384 IGF1RP08069 1367 aa21.95■■□□□ 1.1
LPCAT4-210ENST00000623384 KIAA0586Q9BVV6 1533 aa21.94■■□□□ 1.1
LPCAT4-210ENST00000623384 FKBP8Q14318 412 aa21.93■■□□□ 1.1
LPCAT4-210ENST00000623384 ABCC10Q5T3U5 1492 aa21.93■■□□□ 1.1
LPCAT4-210ENST00000623384 RUSC2Q8N2Y8 1516 aa21.92■■□□□ 1.1
LPCAT4-210ENST00000623384 KIF13AQ9H1H9 1805 aa21.88■■□□□ 1.09
LPCAT4-210ENST00000623384 RTN4Q9NQC3 1192 aaKnown RBP21.87■■□□□ 1.09
LPCAT4-210ENST00000623384 MAPKBP1O60336 1514 aa21.87■■□□□ 1.09
LPCAT4-210ENST00000623384 TTBK1Q5TCY1 1321 aaPredicted RBP21.84■■□□□ 1.09
LPCAT4-210ENST00000623384 PTPRGP23470 1445 aa21.84■■□□□ 1.09
LPCAT4-210ENST00000623384 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
LPCAT4-210ENST00000623384 CARMIL2Q6F5E8 1435 aa21.82■■□□□ 1.08
LPCAT4-210ENST00000623384 CUL7Q14999 1698 aa21.81■■□□□ 1.08
LPCAT4-210ENST00000623384 ADCY10Q96PN6 1610 aa21.79■■□□□ 1.08
LPCAT4-210ENST00000623384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.79■■□□□ 1.08
LPCAT4-210ENST00000623384 DIP2BQ9P265 1576 aa21.77■■□□□ 1.08
LPCAT4-210ENST00000623384 TNIKQ9UKE5 1360 aa21.76■■□□□ 1.07
LPCAT4-210ENST00000623384 AMER1Q5JTC6 1135 aaPredicted RBP21.76■■□□□ 1.07
LPCAT4-210ENST00000623384 KDM6BO15054 1643 aa21.7■■□□□ 1.06
LPCAT4-210ENST00000623384 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
LPCAT4-210ENST00000623384 ABCC2Q92887 1545 aa21.67■■□□□ 1.06
LPCAT4-210ENST00000623384 PLB1Q6P1J6 1458 aa21.66■■□□□ 1.06
LPCAT4-210ENST00000623384 KDM4FA0A1W2PPD8 638 aa21.65■■□□□ 1.06
LPCAT4-210ENST00000623384 ASXL2Q76L83 1435 aa21.63■■□□□ 1.05
LPCAT4-210ENST00000623384 IQGAP2Q13576 1575 aa21.62■■□□□ 1.05
LPCAT4-210ENST00000623384 TSPOAP1O95153 1857 aa21.62■■□□□ 1.05
LPCAT4-210ENST00000623384 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
LPCAT4-210ENST00000623384 UHRF1BP1LA0JNW5 1464 aa21.6■■□□□ 1.05
LPCAT4-210ENST00000623384 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
LPCAT4-210ENST00000623384 GLI2P10070 1586 aa21.54■■□□□ 1.04
LPCAT4-210ENST00000623384 DISP1Q96F81 1524 aa21.53■■□□□ 1.04
LPCAT4-210ENST00000623384 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.03
LPCAT4-210ENST00000623384 U3KPZ7 1027 aaPredicted RBP21.51■■□□□ 1.03
LPCAT4-210ENST00000623384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
LPCAT4-210ENST00000623384 HNRNPUL2Q1KMD3 747 aaKnown RBP21.5■■□□□ 1.03
LPCAT4-210ENST00000623384 SAMD1Q6SPF0 538 aaPredicted RBP21.5■■□□□ 1.03
LPCAT4-210ENST00000623384 KDM5BQ9UGL1 1544 aa21.49■■□□□ 1.03
LPCAT4-210ENST00000623384 UGGT2Q9NYU1 1516 aa21.48■■□□□ 1.03
LPCAT4-210ENST00000623384 SLC24A1O60721 1099 aa21.48■■□□□ 1.03
LPCAT4-210ENST00000623384 TEX14Q8IWB6 1497 aa21.48■■□□□ 1.03
LPCAT4-210ENST00000623384 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
LPCAT4-210ENST00000623384 GOLGA3Q08378 1498 aa21.4■■□□□ 1.02
LPCAT4-210ENST00000623384 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
LPCAT4-210ENST00000623384 KIAA0556O60303 1618 aa21.39■■□□□ 1.01
LPCAT4-210ENST00000623384 PPRC1Q5VV67 1664 aaKnown RBP21.37■■□□□ 1.01
LPCAT4-210ENST00000623384 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
LPCAT4-210ENST00000623384 COL17A1Q9UMD9 1497 aaPredicted RBP21.37■■□□□ 1.01
LPCAT4-210ENST00000623384 WDR7Q9Y4E6 1490 aa21.37■■□□□ 1.01
LPCAT4-210ENST00000623384 ZCCHC11Q5TAX3 1644 aaKnown RBP21.37■■□□□ 1.01
LPCAT4-210ENST00000623384 MAP3K4Q9Y6R4 1608 aa21.35■■□□□ 1.01
LPCAT4-210ENST00000623384 CD109Q6YHK3 1445 aa21.33■■□□□ 1.01
LPCAT4-210ENST00000623384 MAGI3Q5TCQ9 1506 aa21.26■□□□□ 0.99
LPCAT4-210ENST00000623384 ILDR1Q86SU0 546 aaPredicted RBP21.25■□□□□ 0.99
LPCAT4-210ENST00000623384 CTTNBP2Q8WZ74 1663 aa21.24■□□□□ 0.99
LPCAT4-210ENST00000623384 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
LPCAT4-210ENST00000623384 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
LPCAT4-210ENST00000623384 ABCA8O94911 1581 aa21.22■□□□□ 0.99
LPCAT4-210ENST00000623384 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
LPCAT4-210ENST00000623384 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
LPCAT4-210ENST00000623384 PHLDB1Q86UU1 1377 aa21.16■□□□□ 0.98
LPCAT4-210ENST00000623384 ZNF219Q9P2Y4 722 aaPredicted RBP21.15■□□□□ 0.98
LPCAT4-210ENST00000623384 ATP10BO94823 1461 aa21.13■□□□□ 0.97
LPCAT4-210ENST00000623384 ARAP3Q8WWN8 1544 aa21.1■□□□□ 0.97
LPCAT4-210ENST00000623384 HECW2Q9P2P5 1572 aa21.1■□□□□ 0.97
LPCAT4-210ENST00000623384 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
LPCAT4-210ENST00000623384 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
LPCAT4-210ENST00000623384 PLEKHD1A6NEE1 506 aa21.04■□□□□ 0.96
LPCAT4-210ENST00000623384 ARID4BQ4LE39 1312 aaPredicted RBP21.03■□□□□ 0.96
LPCAT4-210ENST00000623384 NEO1Q92859 1461 aa21■□□□□ 0.95
LPCAT4-210ENST00000623384 APLP2Q06481 763 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms