RNA–Protein interactions for RNA: ENST00000623368.3

FDFT1-226, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-226ENST00000623368 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
FDFT1-226ENST00000623368 RRBP1Q9P2E9 1410 aaKnown RBP27.59■■■□□ 2.01
FDFT1-226ENST00000623368 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
FDFT1-226ENST00000623368 KANK4Q5T7N3 995 aaPredicted RBP27.57■■■□□ 2
FDFT1-226ENST00000623368 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
FDFT1-226ENST00000623368 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
FDFT1-226ENST00000623368 RAD54L2Q9Y4B4 1467 aa27.56■■■□□ 2
FDFT1-226ENST00000623368 WDR97A6NE52 1622 aa27.51■■□□□ 1.99
FDFT1-226ENST00000623368 CUL7Q14999 1698 aa27.46■■□□□ 1.99
FDFT1-226ENST00000623368 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
FDFT1-226ENST00000623368 TIAM1Q13009 1591 aa27.44■■□□□ 1.98
FDFT1-226ENST00000623368 MAP3K1Q13233 1512 aa27.4■■□□□ 1.98
FDFT1-226ENST00000623368 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
FDFT1-226ENST00000623368 RBM19Q9Y4C8 960 aaKnown RBP27.37■■□□□ 1.97
FDFT1-226ENST00000623368 CCNB3Q8WWL7 1395 aa27.37■■□□□ 1.97
FDFT1-226ENST00000623368 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
FDFT1-226ENST00000623368 CFAP43Q8NDM7 1665 aa27.35■■□□□ 1.97
FDFT1-226ENST00000623368 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
FDFT1-226ENST00000623368 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
FDFT1-226ENST00000623368 MAPKBP1O60336 1514 aa27.3■■□□□ 1.96
FDFT1-226ENST00000623368 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
FDFT1-226ENST00000623368 FKBP8Q14318 412 aa27.29■■□□□ 1.96
FDFT1-226ENST00000623368 KCNH8Q96L42 1107 aa27.29■■□□□ 1.96
FDFT1-226ENST00000623368 EFCAB5A4FU69 1503 aa27.28■■□□□ 1.96
FDFT1-226ENST00000623368 FHAD1B1AJZ9 1412 aa27.28■■□□□ 1.96
FDFT1-226ENST00000623368 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
FDFT1-226ENST00000623368 LRRC9Q6ZRR7 1453 aa27.26■■□□□ 1.95
FDFT1-226ENST00000623368 BCANQ96GW7 911 aa27.25■■□□□ 1.95
FDFT1-226ENST00000623368 NEFLP07196 543 aa27.23■■□□□ 1.95
FDFT1-226ENST00000623368 MYT1LQ9UL68 1186 aa27.23■■□□□ 1.95
FDFT1-226ENST00000623368 FHOD3Q2V2M9 1422 aa27.23■■□□□ 1.95
FDFT1-226ENST00000623368 RAB3GAP2Q9H2M9 1393 aa27.22■■□□□ 1.95
FDFT1-226ENST00000623368 MSH5O43196 834 aa27.21■■□□□ 1.95
FDFT1-226ENST00000623368 FYCO1Q9BQS8 1478 aa27.17■■□□□ 1.94
FDFT1-226ENST00000623368 GAPVD1Q14C86 1478 aa27.17■■□□□ 1.94
FDFT1-226ENST00000623368 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
FDFT1-226ENST00000623368 ANO8Q9HCE9 1232 aaPredicted RBP27.17■■□□□ 1.94
FDFT1-226ENST00000623368 TARBP1Q13395 1621 aaKnown RBP27.16■■□□□ 1.94
FDFT1-226ENST00000623368 TDRD9Q8NDG6 1382 aaKnown RBP27.16■■□□□ 1.94
FDFT1-226ENST00000623368 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.933e-7■■■■□ 23
FDFT1-226ENST00000623368 CCER2I3L3R5 266 aa27.13■■□□□ 1.93
FDFT1-226ENST00000623368 PHLDB1Q86UU1 1377 aa27.12■■□□□ 1.93
FDFT1-226ENST00000623368 CASKIN1Q8WXD9 1431 aa27.11■■□□□ 1.93
FDFT1-226ENST00000623368 SETD5Q9C0A6 1442 aa27.11■■□□□ 1.93
FDFT1-226ENST00000623368 SAMD9Q5K651 1589 aa27.11■■□□□ 1.93
FDFT1-226ENST00000623368 PPP1R15AO75807 674 aaPredicted RBP27.09■■□□□ 1.93
FDFT1-226ENST00000623368 DDX10Q13206 875 aaKnown RBP27.09■■□□□ 1.93
FDFT1-226ENST00000623368 TIMELESSQ9UNS1 1208 aa27.09■■□□□ 1.93
FDFT1-226ENST00000623368 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
FDFT1-226ENST00000623368 SNAPC4Q5SXM2 1469 aa27.05■■□□□ 1.92
FDFT1-226ENST00000623368 FANCIQ9NVI1 1328 aa27.04■■□□□ 1.92
FDFT1-226ENST00000623368 ITGAEP38570 1179 aa27.04■■□□□ 1.92
FDFT1-226ENST00000623368 LRRIQ1Q96JM4 1722 aa27.04■■□□□ 1.92
FDFT1-226ENST00000623368 FMN1Q68DA7 1419 aa27.01■■□□□ 1.92
FDFT1-226ENST00000623368 DEKP35659 375 aaKnown RBP26.99■■□□□ 1.91
FDFT1-226ENST00000623368 ANP32CO43423 234 aa26.98■■□□□ 1.91
FDFT1-226ENST00000623368 ATP1B4Q9UN42 357 aaPredicted RBP26.98■■□□□ 1.91
FDFT1-226ENST00000623368 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
FDFT1-226ENST00000623368 ERICH6BQ5W0A0 696 aa26.93■■□□□ 1.9
FDFT1-226ENST00000623368 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
FDFT1-226ENST00000623368 GRIN2BQ13224 1484 aa26.9■■□□□ 1.9
FDFT1-226ENST00000623368 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
FDFT1-226ENST00000623368 TRIM52Q96A61 297 aa26.89■■□□□ 1.9
FDFT1-226ENST00000623368 SIN3AQ96ST3 1273 aa26.89■■□□□ 1.9
FDFT1-226ENST00000623368 FAM50AQ14320 339 aaKnown RBP26.87■■□□□ 1.89
FDFT1-226ENST00000623368 UBE2Q2Q8WVN8 375 aa26.85■■□□□ 1.89
FDFT1-226ENST00000623368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.84■■□□□ 1.893e-30■■□□□ 11.7
FDFT1-226ENST00000623368 SALL2Q9Y467 1007 aaPredicted RBP26.83■■□□□ 1.88
FDFT1-226ENST00000623368 FGD6Q6ZV73 1430 aa26.81■■□□□ 1.88
FDFT1-226ENST00000623368 IQGAP2Q13576 1575 aa26.81■■□□□ 1.88
FDFT1-226ENST00000623368 WDR62O43379 1518 aa26.78■■□□□ 1.88
FDFT1-226ENST00000623368 MTUS2Q5JR59 1369 aa26.78■■□□□ 1.88
FDFT1-226ENST00000623368 SUPT6HQ7KZ85 1726 aaKnown RBP26.77■■□□□ 1.88
FDFT1-226ENST00000623368 EHBP1L1Q8N3D4 1523 aa26.76■■□□□ 1.88
FDFT1-226ENST00000623368 CDK11AQ9UQ88 783 aaPredicted RBP26.76■■□□□ 1.87
FDFT1-226ENST00000623368 NCOA2Q15596 1464 aa26.73■■□□□ 1.87
FDFT1-226ENST00000623368 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
FDFT1-226ENST00000623368 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
FDFT1-226ENST00000623368 MAGI3Q5TCQ9 1506 aa26.71■■□□□ 1.87
FDFT1-226ENST00000623368 HECW1Q76N89 1606 aa26.71■■□□□ 1.87
FDFT1-226ENST00000623368 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
FDFT1-226ENST00000623368 CCDC18Q5T9S5 1454 aa26.68■■□□□ 1.86
FDFT1-226ENST00000623368 HIRIP3Q9BW71 556 aaPredicted RBP26.68■■□□□ 1.86
FDFT1-226ENST00000623368 MYOM3Q5VTT5 1437 aa26.68■■□□□ 1.86
FDFT1-226ENST00000623368 UGGT2Q9NYU1 1516 aa26.67■■□□□ 1.86
FDFT1-226ENST00000623368 TONSLQ96HA7 1378 aa26.67■■□□□ 1.86
FDFT1-226ENST00000623368 PTPRKQ15262 1439 aa26.64■■□□□ 1.86
FDFT1-226ENST00000623368 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
FDFT1-226ENST00000623368 PTPN23Q9H3S7 1636 aa26.63■■□□□ 1.85
FDFT1-226ENST00000623368 HNRNPUQ00839 825 aaKnown RBP eCLIP26.59■■□□□ 1.858e-7■□□□□ 11
FDFT1-226ENST00000623368 EPRSP07814 1512 aaKnown RBP26.59■■□□□ 1.85
FDFT1-226ENST00000623368 CCDC136Q96JN2 1154 aa26.58■■□□□ 1.85
FDFT1-226ENST00000623368 HFM1A2PYH4 1435 aa26.58■■□□□ 1.85
FDFT1-226ENST00000623368 CDK13Q14004 1512 aaKnown RBP26.56■■□□□ 1.84
FDFT1-226ENST00000623368 KIAA0556O60303 1618 aa26.55■■□□□ 1.84
FDFT1-226ENST00000623368 UACAQ9BZF9 1416 aa26.54■■□□□ 1.84
FDFT1-226ENST00000623368 PPP4R2Q9NY27 417 aa26.54■■□□□ 1.84
FDFT1-226ENST00000623368 TCOF1Q13428 1488 aaKnown RBP26.52■■□□□ 1.84
FDFT1-226ENST00000623368 KIAA0586Q9BVV6 1533 aa26.52■■□□□ 1.84
FDFT1-226ENST00000623368 GRIN2AQ12879 1464 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms