RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 CHMP7Q8WUX9 453 aaPredicted RBP10.31□□□□□ -0.76
EBF1-211ENST00000622875 CERKQ8TCT0 537 aa10.3□□□□□ -0.76
EBF1-211ENST00000622875 NUP160Q12769 1436 aa10.3□□□□□ -0.76
EBF1-211ENST00000622875 MYT1Q01538 1121 aa10.29□□□□□ -0.76
EBF1-211ENST00000622875 ADAMTSL3P82987 1691 aa10.28□□□□□ -0.76
EBF1-211ENST00000622875 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
EBF1-211ENST00000622875 MAP3K4Q9Y6R4 1608 aa10.24□□□□□ -0.77
EBF1-211ENST00000622875 IQSEC2Q5JU85 1478 aa10.23□□□□□ -0.77
EBF1-211ENST00000622875 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
EBF1-211ENST00000622875 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
EBF1-211ENST00000622875 ABCA5Q8WWZ7 1642 aa10.22□□□□□ -0.77
EBF1-211ENST00000622875 COL17A1Q9UMD9 1497 aaPredicted RBP10.22□□□□□ -0.77
EBF1-211ENST00000622875 TDRD9Q8NDG6 1382 aaKnown RBP10.21□□□□□ -0.77
EBF1-211ENST00000622875 SOGA1O94964 1423 aa10.21□□□□□ -0.78
EBF1-211ENST00000622875 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
EBF1-211ENST00000622875 PTPRMP28827 1452 aa10.19□□□□□ -0.78
EBF1-211ENST00000622875 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
EBF1-211ENST00000622875 TEX14Q8IWB6 1497 aa10.17□□□□□ -0.78
EBF1-211ENST00000622875 KIF21BO75037 1637 aa10.16□□□□□ -0.78
EBF1-211ENST00000622875 NPM1P06748 294 aaKnown RBP eCLIP10.12□□□□□ -0.79
EBF1-211ENST00000622875 FGD5Q6ZNL6 1462 aa10.12□□□□□ -0.79
EBF1-211ENST00000622875 BCORL1Q5H9F3 1711 aa10.11□□□□□ -0.79
EBF1-211ENST00000622875 MED1Q15648 1581 aaPredicted RBP10.11□□□□□ -0.79
EBF1-211ENST00000622875 PRG4Q92954 1404 aaPredicted RBP10.1□□□□□ -0.79
EBF1-211ENST00000622875 PLB1Q6P1J6 1458 aa10.1□□□□□ -0.79
EBF1-211ENST00000622875 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
EBF1-211ENST00000622875 PELP1Q8IZL8 1130 aaKnown RBP10.07□□□□□ -0.8
EBF1-211ENST00000622875 ABCA10Q8WWZ4 1543 aa10.06□□□□□ -0.8
EBF1-211ENST00000622875 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
EBF1-211ENST00000622875 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
EBF1-211ENST00000622875 LTBP4Q8N2S1 1624 aa10.02□□□□□ -0.8
EBF1-211ENST00000622875 ABCC2Q92887 1545 aa10.02□□□□□ -0.81
EBF1-211ENST00000622875 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
EBF1-211ENST00000622875 EPRSP07814 1512 aaKnown RBP10.01□□□□□ -0.81
EBF1-211ENST00000622875 CUL7Q14999 1698 aa10.01□□□□□ -0.81
EBF1-211ENST00000622875 ASXL2Q76L83 1435 aa10□□□□□ -0.81
EBF1-211ENST00000622875 FHAD1B1AJZ9 1412 aa10□□□□□ -0.81
EBF1-211ENST00000622875 CFAP43Q8NDM7 1665 aa9.99□□□□□ -0.81
EBF1-211ENST00000622875 UHRF1BP1LA0JNW5 1464 aa9.99□□□□□ -0.81
EBF1-211ENST00000622875 CUX1P39880 1505 aa9.99□□□□□ -0.81
EBF1-211ENST00000622875 MAGI3Q5TCQ9 1506 aa9.99□□□□□ -0.81
EBF1-211ENST00000622875 PREX1Q8TCU6 1659 aa9.98□□□□□ -0.81
EBF1-211ENST00000622875 RIMS1Q86UR5 1692 aaKnown RBP9.98□□□□□ -0.81
EBF1-211ENST00000622875 PTPRTO14522 1441 aa9.95□□□□□ -0.82
EBF1-211ENST00000622875 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
EBF1-211ENST00000622875 ARAP3Q8WWN8 1544 aa9.95□□□□□ -0.82
EBF1-211ENST00000622875 JPH4Q96JJ6 628 aa9.92□□□□□ -0.82
EBF1-211ENST00000622875 YEATS2Q9ULM3 1422 aa9.92□□□□□ -0.82
EBF1-211ENST00000622875 TTC37Q6PGP7 1564 aa9.91□□□□□ -0.82
EBF1-211ENST00000622875 DMRT2Q9Y5R5 561 aa9.9□□□□□ -0.83
EBF1-211ENST00000622875 KDM5BQ9UGL1 1544 aa9.89□□□□□ -0.83
EBF1-211ENST00000622875 ZCCHC11Q5TAX3 1644 aaKnown RBP9.87□□□□□ -0.83
EBF1-211ENST00000622875 HSPA2P54652 639 aa9.84□□□□□ -0.83
EBF1-211ENST00000622875 ARHGEF40Q8TER5 1519 aa9.82□□□□□ -0.84
EBF1-211ENST00000622875 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
EBF1-211ENST00000622875 FER1L4A9Z1Z3 1794 aa9.82□□□□□ -0.84
EBF1-211ENST00000622875 FRMPD1Q5SYB0 1578 aa9.81□□□□□ -0.84
EBF1-211ENST00000622875 PHLDB1Q86UU1 1377 aa9.81□□□□□ -0.84
EBF1-211ENST00000622875 WDR7Q9Y4E6 1490 aa9.79□□□□□ -0.84
EBF1-211ENST00000622875 PTPRGP23470 1445 aa9.78□□□□□ -0.84
EBF1-211ENST00000622875 CD109Q6YHK3 1445 aa9.75□□□□□ -0.85
EBF1-211ENST00000622875 UACAQ9BZF9 1416 aa9.75□□□□□ -0.85
EBF1-211ENST00000622875 TNIKQ9UKE5 1360 aa9.74□□□□□ -0.85
EBF1-211ENST00000622875 SETD1BQ9UPS6 1966 aaKnown RBP9.73□□□□□ -0.85
EBF1-211ENST00000622875 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
EBF1-211ENST00000622875 BIVM-ERCC5R4GMW8 1640 aa9.72□□□□□ -0.85
EBF1-211ENST00000622875 ARHGEF12Q9NZN5 1544 aa9.71□□□□□ -0.85
EBF1-211ENST00000622875 FANCAO15360 1455 aa9.71□□□□□ -0.86
EBF1-211ENST00000622875 POGZQ7Z3K3 1410 aa9.7□□□□□ -0.86
EBF1-211ENST00000622875 RICTORQ6R327 1708 aa9.7□□□□□ -0.86
EBF1-211ENST00000622875 ZMYM4Q5VZL5 1548 aa9.69□□□□□ -0.86
EBF1-211ENST00000622875 PHF23Q9BUL5 403 aaPredicted RBP9.69□□□□□ -0.86
EBF1-211ENST00000622875 NEO1Q92859 1461 aa9.68□□□□□ -0.86
EBF1-211ENST00000622875 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
EBF1-211ENST00000622875 ABCA9Q8IUA7 1624 aa9.68□□□□□ -0.86
EBF1-211ENST00000622875 SETD1AO15047 1707 aaKnown RBP9.68□□□□□ -0.86
EBF1-211ENST00000622875 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
EBF1-211ENST00000622875 KIAA0556O60303 1618 aa9.66□□□□□ -0.86
EBF1-211ENST00000622875 UHRF1BP1Q6BDS2 1440 aa9.66□□□□□ -0.86
EBF1-211ENST00000622875 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
EBF1-211ENST00000622875 UBAP1LF5GYI3 381 aa9.65□□□□□ -0.86
EBF1-211ENST00000622875 HSPA1LP34931 641 aa9.65□□□□□ -0.86
EBF1-211ENST00000622875 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
EBF1-211ENST00000622875 RGS17Q9UGC6 210 aaPredicted RBP9.64□□□□□ -0.87
EBF1-211ENST00000622875 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
EBF1-211ENST00000622875 EFCAB5A4FU69 1503 aa9.62□□□□□ -0.87
EBF1-211ENST00000622875 CPS1P31327 1500 aa9.6□□□□□ -0.87
EBF1-211ENST00000622875 DISP1Q96F81 1524 aa9.59□□□□□ -0.87
EBF1-211ENST00000622875 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
EBF1-211ENST00000622875 AKNAQ7Z591 1439 aa9.59□□□□□ -0.87
EBF1-211ENST00000622875 FHOD3Q2V2M9 1422 aa9.58□□□□□ -0.88
EBF1-211ENST00000622875 C3P01024 1663 aa9.58□□□□□ -0.88
EBF1-211ENST00000622875 ZNF142P52746 1687 aaPredicted RBP9.58□□□□□ -0.88
EBF1-211ENST00000622875 IQGAP2Q13576 1575 aa9.57□□□□□ -0.88
EBF1-211ENST00000622875 CFAP74Q9C0B2 1584 aa9.57□□□□□ -0.88
EBF1-211ENST00000622875 ZFYVE16Q7Z3T8 1539 aa9.57□□□□□ -0.88
EBF1-211ENST00000622875 PLA2R1Q13018 1463 aa9.55□□□□□ -0.88
EBF1-211ENST00000622875 ABCA8O94911 1581 aa9.54□□□□□ -0.88
EBF1-211ENST00000622875 ARID4BQ4LE39 1312 aaPredicted RBP9.54□□□□□ -0.88
EBF1-211ENST00000622875 UGGT2Q9NYU1 1516 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms