RNA–Protein interactions for RNA: ENST00000622854.1

AP001065.3-201, humanhuman

BASIC

Gene AP001065.3, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.3-201ENST00000622854 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
AP001065.3-201ENST00000622854 EIF4G3O43432 1585 aaKnown RBP17.34■□□□□ 0.37
AP001065.3-201ENST00000622854 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.36
AP001065.3-201ENST00000622854 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
AP001065.3-201ENST00000622854 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
AP001065.3-201ENST00000622854 CTTNBP2Q8WZ74 1663 aa17.26■□□□□ 0.35
AP001065.3-201ENST00000622854 CLIP1P30622 1438 aa17.24■□□□□ 0.35
AP001065.3-201ENST00000622854 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
AP001065.3-201ENST00000622854 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
AP001065.3-201ENST00000622854 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
AP001065.3-201ENST00000622854 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
AP001065.3-201ENST00000622854 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
AP001065.3-201ENST00000622854 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
AP001065.3-201ENST00000622854 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
AP001065.3-201ENST00000622854 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
AP001065.3-201ENST00000622854 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
AP001065.3-201ENST00000622854 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
AP001065.3-201ENST00000622854 SYNJ2O15056 1496 aa17.06■□□□□ 0.32
AP001065.3-201ENST00000622854 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
AP001065.3-201ENST00000622854 IQGAP2Q13576 1575 aa17.04■□□□□ 0.32
AP001065.3-201ENST00000622854 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
AP001065.3-201ENST00000622854 SAMD9Q5K651 1589 aa17.02■□□□□ 0.32
AP001065.3-201ENST00000622854 CHD1O14646 1710 aa17.02■□□□□ 0.32
AP001065.3-201ENST00000622854 CEP170Q5SW79 1584 aa17.02■□□□□ 0.31
AP001065.3-201ENST00000622854 FHOD3Q2V2M9 1422 aa16.97■□□□□ 0.31
AP001065.3-201ENST00000622854 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
AP001065.3-201ENST00000622854 CHMP7Q8WUX9 453 aaPredicted RBP16.96■□□□□ 0.31
AP001065.3-201ENST00000622854 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.3
AP001065.3-201ENST00000622854 NUP160Q12769 1436 aa16.95■□□□□ 0.3
AP001065.3-201ENST00000622854 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
AP001065.3-201ENST00000622854 FBLN2P98095 1184 aa16.94■□□□□ 0.3
AP001065.3-201ENST00000622854 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
AP001065.3-201ENST00000622854 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
AP001065.3-201ENST00000622854 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
AP001065.3-201ENST00000622854 KIAA0556O60303 1618 aa16.88■□□□□ 0.29
AP001065.3-201ENST00000622854 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
AP001065.3-201ENST00000622854 CFAP43Q8NDM7 1665 aa16.86■□□□□ 0.29
AP001065.3-201ENST00000622854 PCGF6Q9BYE7 350 aa16.86■□□□□ 0.29
AP001065.3-201ENST00000622854 DISP1Q96F81 1524 aa16.86■□□□□ 0.29
AP001065.3-201ENST00000622854 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
AP001065.3-201ENST00000622854 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
AP001065.3-201ENST00000622854 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
AP001065.3-201ENST00000622854 TIAM1Q13009 1591 aa16.83■□□□□ 0.28
AP001065.3-201ENST00000622854 FMN1Q68DA7 1419 aa16.83■□□□□ 0.28
AP001065.3-201ENST00000622854 CASKIN1Q8WXD9 1431 aa16.82■□□□□ 0.28
AP001065.3-201ENST00000622854 APLP2Q06481 763 aa16.82■□□□□ 0.28
AP001065.3-201ENST00000622854 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
AP001065.3-201ENST00000622854 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
AP001065.3-201ENST00000622854 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
AP001065.3-201ENST00000622854 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
AP001065.3-201ENST00000622854 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
AP001065.3-201ENST00000622854 HECW1Q76N89 1606 aa16.75■□□□□ 0.27
AP001065.3-201ENST00000622854 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
AP001065.3-201ENST00000622854 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
AP001065.3-201ENST00000622854 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
AP001065.3-201ENST00000622854 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
AP001065.3-201ENST00000622854 RAPGEF6Q8TEU7 1601 aa16.71■□□□□ 0.27
AP001065.3-201ENST00000622854 LRRC9Q6ZRR7 1453 aa16.71■□□□□ 0.27
AP001065.3-201ENST00000622854 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
AP001065.3-201ENST00000622854 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
AP001065.3-201ENST00000622854 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
AP001065.3-201ENST00000622854 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
AP001065.3-201ENST00000622854 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
AP001065.3-201ENST00000622854 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
AP001065.3-201ENST00000622854 NUP153P49790 1475 aaKnown RBP16.64■□□□□ 0.25
AP001065.3-201ENST00000622854 PLB1Q6P1J6 1458 aa16.64■□□□□ 0.25
AP001065.3-201ENST00000622854 ABCA8O94911 1581 aa16.64■□□□□ 0.25
AP001065.3-201ENST00000622854 MAGI3Q5TCQ9 1506 aa16.63■□□□□ 0.25
AP001065.3-201ENST00000622854 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
AP001065.3-201ENST00000622854 SUPT6HQ7KZ85 1726 aaKnown RBP16.59■□□□□ 0.25
AP001065.3-201ENST00000622854 ARID3CA6NKF2 412 aa16.58■□□□□ 0.24
AP001065.3-201ENST00000622854 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
AP001065.3-201ENST00000622854 PTPRGP23470 1445 aa16.56■□□□□ 0.24
AP001065.3-201ENST00000622854 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
AP001065.3-201ENST00000622854 PHLDB1Q86UU1 1377 aa16.55■□□□□ 0.24
AP001065.3-201ENST00000622854 NCOA2Q15596 1464 aa16.52■□□□□ 0.23
AP001065.3-201ENST00000622854 ARHGEF11O15085 1522 aa16.51■□□□□ 0.23
AP001065.3-201ENST00000622854 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
AP001065.3-201ENST00000622854 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
AP001065.3-201ENST00000622854 UACAQ9BZF9 1416 aa16.49■□□□□ 0.23
AP001065.3-201ENST00000622854 ABCC2Q92887 1545 aa16.48■□□□□ 0.23
AP001065.3-201ENST00000622854 ATP10BO94823 1461 aa16.48■□□□□ 0.23
AP001065.3-201ENST00000622854 ADCY10Q96PN6 1610 aa16.47■□□□□ 0.23
AP001065.3-201ENST00000622854 KIF14Q15058 1648 aa16.45■□□□□ 0.22
AP001065.3-201ENST00000622854 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
AP001065.3-201ENST00000622854 FGD6Q6ZV73 1430 aa16.45■□□□□ 0.22
AP001065.3-201ENST00000622854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
AP001065.3-201ENST00000622854 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
AP001065.3-201ENST00000622854 MYOM3Q5VTT5 1437 aa16.44■□□□□ 0.22
AP001065.3-201ENST00000622854 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
AP001065.3-201ENST00000622854 UHRF1BP1LA0JNW5 1464 aa16.41■□□□□ 0.22
AP001065.3-201ENST00000622854 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
AP001065.3-201ENST00000622854 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
AP001065.3-201ENST00000622854 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
AP001065.3-201ENST00000622854 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
AP001065.3-201ENST00000622854 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
AP001065.3-201ENST00000622854 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
AP001065.3-201ENST00000622854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.35■□□□□ 0.21
AP001065.3-201ENST00000622854 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
AP001065.3-201ENST00000622854 HRCP23327 699 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms