RNA–Protein interactions for RNA: ENST00000622768.4

GRIA3-209, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene GRIA3, Length 5,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-209ENST00000622768 MAGI1Q96QZ7 1491 aaPredicted RBP13.51□□□□□ -0.25
GRIA3-209ENST00000622768 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
GRIA3-209ENST00000622768 ITGAEP38570 1179 aa13.5□□□□□ -0.25
GRIA3-209ENST00000622768 RAPGEF2Q9Y4G8 1499 aa13.5□□□□□ -0.25
GRIA3-209ENST00000622768 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
GRIA3-209ENST00000622768 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
GRIA3-209ENST00000622768 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
GRIA3-209ENST00000622768 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.25
GRIA3-209ENST00000622768 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
GRIA3-209ENST00000622768 HDGFP51858 240 aaKnown RBP13.46□□□□□ -0.26
GRIA3-209ENST00000622768 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
GRIA3-209ENST00000622768 POLA1P09884 1462 aaPredicted RBP13.42□□□□□ -0.26
GRIA3-209ENST00000622768 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
GRIA3-209ENST00000622768 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
GRIA3-209ENST00000622768 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
GRIA3-209ENST00000622768 WDR62O43379 1518 aa13.39□□□□□ -0.27
GRIA3-209ENST00000622768 PPP1R15AO75807 674 aaPredicted RBP13.38□□□□□ -0.27
GRIA3-209ENST00000622768 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
GRIA3-209ENST00000622768 KANK1Q14678 1352 aa13.36□□□□□ -0.27
GRIA3-209ENST00000622768 CHGAP10645 457 aaKnown RBP13.35□□□□□ -0.27
GRIA3-209ENST00000622768 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
GRIA3-209ENST00000622768 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
GRIA3-209ENST00000622768 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
GRIA3-209ENST00000622768 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
GRIA3-209ENST00000622768 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
GRIA3-209ENST00000622768 MLECQ14165 292 aa13.3□□□□□ -0.28
GRIA3-209ENST00000622768 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
GRIA3-209ENST00000622768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.29
GRIA3-209ENST00000622768 ERICH3Q5RHP9 1530 aa13.26□□□□□ -0.29
GRIA3-209ENST00000622768 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
GRIA3-209ENST00000622768 IGF1RP08069 1367 aa13.25□□□□□ -0.29
GRIA3-209ENST00000622768 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
GRIA3-209ENST00000622768 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
GRIA3-209ENST00000622768 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
GRIA3-209ENST00000622768 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
GRIA3-209ENST00000622768 LOC105371045A0A1W2PR82 267 aa13.22□□□□□ -0.29
GRIA3-209ENST00000622768 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
GRIA3-209ENST00000622768 CUX1P39880 1505 aa13.22□□□□□ -0.29
GRIA3-209ENST00000622768 TEX14Q8IWB6 1497 aa13.21□□□□□ -0.29
GRIA3-209ENST00000622768 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
GRIA3-209ENST00000622768 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
GRIA3-209ENST00000622768 EID1Q9Y6B2 187 aa13.19□□□□□ -0.3
GRIA3-209ENST00000622768 SPAG9O60271 1321 aaKnown RBP13.19□□□□□ -0.3
GRIA3-209ENST00000622768 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
GRIA3-209ENST00000622768 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
GRIA3-209ENST00000622768 CUL7Q14999 1698 aa13.18□□□□□ -0.3
GRIA3-209ENST00000622768 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
GRIA3-209ENST00000622768 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
GRIA3-209ENST00000622768 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
GRIA3-209ENST00000622768 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
GRIA3-209ENST00000622768 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
GRIA3-209ENST00000622768 GGT6Q6P531 493 aa13.13□□□□□ -0.31
GRIA3-209ENST00000622768 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
GRIA3-209ENST00000622768 PPARGC1BQ86YN6 1023 aaKnown RBP13.12□□□□□ -0.31
GRIA3-209ENST00000622768 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
GRIA3-209ENST00000622768 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.31
GRIA3-209ENST00000622768 FOXD1Q16676 465 aa13.08□□□□□ -0.32
GRIA3-209ENST00000622768 CHIC2Q9UKJ5 165 aa13.08□□□□□ -0.32
GRIA3-209ENST00000622768 IQGAP2Q13576 1575 aa13.07□□□□□ -0.32
GRIA3-209ENST00000622768 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
GRIA3-209ENST00000622768 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
GRIA3-209ENST00000622768 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
GRIA3-209ENST00000622768 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
GRIA3-209ENST00000622768 WASHC2CQ9Y4E1 1318 aa13.06□□□□□ -0.32
GRIA3-209ENST00000622768 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
GRIA3-209ENST00000622768 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
GRIA3-209ENST00000622768 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
GRIA3-209ENST00000622768 ANKRD30AQ9BXX3 1397 aa13.02□□□□□ -0.32
GRIA3-209ENST00000622768 KIF3BO15066 747 aa13.01□□□□□ -0.33
GRIA3-209ENST00000622768 POLR3GLQ9BT43 218 aa13□□□□□ -0.33
GRIA3-209ENST00000622768 AKNAQ7Z591 1439 aa13□□□□□ -0.33
GRIA3-209ENST00000622768 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
GRIA3-209ENST00000622768 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
GRIA3-209ENST00000622768 NEFMP07197 916 aa12.97□□□□□ -0.33
GRIA3-209ENST00000622768 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
GRIA3-209ENST00000622768 ADAMTS12P58397 1594 aa12.95□□□□□ -0.34
GRIA3-209ENST00000622768 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.95□□□□□ -0.34
GRIA3-209ENST00000622768 ARHGAP5Q13017 1502 aa12.95□□□□□ -0.34
GRIA3-209ENST00000622768 PPP6R1Q9UPN7 881 aa12.93□□□□□ -0.34
GRIA3-209ENST00000622768 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
GRIA3-209ENST00000622768 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
GRIA3-209ENST00000622768 NUP160Q12769 1436 aa12.93□□□□□ -0.34
GRIA3-209ENST00000622768 RRP7BPQ9NSQ0 103 aa12.92□□□□□ -0.34
GRIA3-209ENST00000622768 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
GRIA3-209ENST00000622768 THEMISQ8N1K5 641 aaPredicted RBP12.91□□□□□ -0.34
GRIA3-209ENST00000622768 DENND4BO75064 1496 aaPredicted RBP12.91□□□□□ -0.34
GRIA3-209ENST00000622768 HECW1Q76N89 1606 aa12.91□□□□□ -0.34
GRIA3-209ENST00000622768 ASXL2Q76L83 1435 aa12.9□□□□□ -0.34
GRIA3-209ENST00000622768 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.35
GRIA3-209ENST00000622768 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
GRIA3-209ENST00000622768 POGKQ9P215 609 aa12.89□□□□□ -0.35
GRIA3-209ENST00000622768 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
GRIA3-209ENST00000622768 SCAPERQ9BY12 1400 aa12.86□□□□□ -0.35
GRIA3-209ENST00000622768 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
GRIA3-209ENST00000622768 TROQ12816 1431 aaPredicted RBP12.85□□□□□ -0.35
GRIA3-209ENST00000622768 CASKIN1Q8WXD9 1431 aa12.85□□□□□ -0.35
GRIA3-209ENST00000622768 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
GRIA3-209ENST00000622768 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
GRIA3-209ENST00000622768 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
GRIA3-209ENST00000622768 ANKLE2Q86XL3 938 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms