RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 FBLN2P98095 1184 aa22.57■■□□□ 1.2
CLTCL1-212ENST00000622493 KIAA0586Q9BVV6 1533 aa22.54■■□□□ 1.2
CLTCL1-212ENST00000622493 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
CLTCL1-212ENST00000622493 NUP160Q12769 1436 aa22.52■■□□□ 1.2
CLTCL1-212ENST00000622493 IQGAP2Q13576 1575 aa22.52■■□□□ 1.19
CLTCL1-212ENST00000622493 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
CLTCL1-212ENST00000622493 EFCAB5A4FU69 1503 aa22.5■■□□□ 1.19
CLTCL1-212ENST00000622493 CEP170Q5SW79 1584 aa22.49■■□□□ 1.19
CLTCL1-212ENST00000622493 CHD1O14646 1710 aa22.48■■□□□ 1.19
CLTCL1-212ENST00000622493 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
CLTCL1-212ENST00000622493 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
CLTCL1-212ENST00000622493 UGGT2Q9NYU1 1516 aa22.43■■□□□ 1.18
CLTCL1-212ENST00000622493 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
CLTCL1-212ENST00000622493 JPH4Q96JJ6 628 aa22.33■■□□□ 1.17
CLTCL1-212ENST00000622493 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
CLTCL1-212ENST00000622493 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
CLTCL1-212ENST00000622493 FMN1Q68DA7 1419 aa22.31■■□□□ 1.16
CLTCL1-212ENST00000622493 DISP1Q96F81 1524 aa22.3■■□□□ 1.16
CLTCL1-212ENST00000622493 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
CLTCL1-212ENST00000622493 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.16
CLTCL1-212ENST00000622493 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
CLTCL1-212ENST00000622493 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
CLTCL1-212ENST00000622493 APLP2Q06481 763 aa22.23■■□□□ 1.15
CLTCL1-212ENST00000622493 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
CLTCL1-212ENST00000622493 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
CLTCL1-212ENST00000622493 FYCO1Q9BQS8 1478 aa22.19■■□□□ 1.14
CLTCL1-212ENST00000622493 PRG4Q92954 1404 aaPredicted RBP22.19■■□□□ 1.14
CLTCL1-212ENST00000622493 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
CLTCL1-212ENST00000622493 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
CLTCL1-212ENST00000622493 TIAM1Q13009 1591 aa22.07■■□□□ 1.12
CLTCL1-212ENST00000622493 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
CLTCL1-212ENST00000622493 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
CLTCL1-212ENST00000622493 PTPRGP23470 1445 aa22.05■■□□□ 1.12
CLTCL1-212ENST00000622493 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
CLTCL1-212ENST00000622493 CFAP43Q8NDM7 1665 aa22.04■■□□□ 1.12
CLTCL1-212ENST00000622493 RAPGEF6Q8TEU7 1601 aa22.04■■□□□ 1.12
CLTCL1-212ENST00000622493 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
CLTCL1-212ENST00000622493 ERCC6L2Q5T890 1561 aa22.01■■□□□ 1.11
CLTCL1-212ENST00000622493 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
CLTCL1-212ENST00000622493 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
CLTCL1-212ENST00000622493 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
CLTCL1-212ENST00000622493 LRRIQ1Q96JM4 1722 aa21.98■■□□□ 1.11
CLTCL1-212ENST00000622493 ABCA8O94911 1581 aa21.98■■□□□ 1.11
CLTCL1-212ENST00000622493 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
CLTCL1-212ENST00000622493 EPRSP07814 1512 aaKnown RBP21.97■■□□□ 1.11
CLTCL1-212ENST00000622493 LRRC9Q6ZRR7 1453 aa21.97■■□□□ 1.11
CLTCL1-212ENST00000622493 NUP153P49790 1475 aaKnown RBP21.97■■□□□ 1.11
CLTCL1-212ENST00000622493 UACAQ9BZF9 1416 aa21.93■■□□□ 1.1
CLTCL1-212ENST00000622493 MTUS2Q5JR59 1369 aa21.88■■□□□ 1.09
CLTCL1-212ENST00000622493 CDK13Q14004 1512 aaKnown RBP21.88■■□□□ 1.09
CLTCL1-212ENST00000622493 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
CLTCL1-212ENST00000622493 EHBP1L1Q8N3D4 1523 aa21.86■■□□□ 1.09
CLTCL1-212ENST00000622493 ABCC2Q92887 1545 aa21.86■■□□□ 1.09
CLTCL1-212ENST00000622493 UHRF1BP1LA0JNW5 1464 aa21.86■■□□□ 1.09
CLTCL1-212ENST00000622493 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
CLTCL1-212ENST00000622493 ATP10BO94823 1461 aa21.83■■□□□ 1.08
CLTCL1-212ENST00000622493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
CLTCL1-212ENST00000622493 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
CLTCL1-212ENST00000622493 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
CLTCL1-212ENST00000622493 MAGI3Q5TCQ9 1506 aa21.81■■□□□ 1.08
CLTCL1-212ENST00000622493 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
CLTCL1-212ENST00000622493 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
CLTCL1-212ENST00000622493 KDM5BQ9UGL1 1544 aa21.75■■□□□ 1.07
CLTCL1-212ENST00000622493 TROQ12816 1431 aaPredicted RBP21.75■■□□□ 1.07
CLTCL1-212ENST00000622493 PLEKHD1A6NEE1 506 aa21.75■■□□□ 1.07
CLTCL1-212ENST00000622493 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
CLTCL1-212ENST00000622493 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
CLTCL1-212ENST00000622493 PHLDB1Q86UU1 1377 aa21.73■■□□□ 1.07
CLTCL1-212ENST00000622493 ADCY10Q96PN6 1610 aa21.72■■□□□ 1.07
CLTCL1-212ENST00000622493 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
CLTCL1-212ENST00000622493 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
CLTCL1-212ENST00000622493 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
CLTCL1-212ENST00000622493 ZCCHC11Q5TAX3 1644 aaKnown RBP21.68■■□□□ 1.06
CLTCL1-212ENST00000622493 CCNB3Q8WWL7 1395 aa21.67■■□□□ 1.06
CLTCL1-212ENST00000622493 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
CLTCL1-212ENST00000622493 KIF14Q15058 1648 aa21.63■■□□□ 1.05
CLTCL1-212ENST00000622493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.62■■□□□ 1.05
CLTCL1-212ENST00000622493 FGD6Q6ZV73 1430 aa21.62■■□□□ 1.05
CLTCL1-212ENST00000622493 NPM1P06748 294 aaKnown RBP eCLIP21.6■■□□□ 1.05
CLTCL1-212ENST00000622493 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
CLTCL1-212ENST00000622493 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
CLTCL1-212ENST00000622493 ABCC10Q5T3U5 1492 aa21.56■■□□□ 1.04
CLTCL1-212ENST00000622493 ITSN2Q9NZM3 1697 aa21.55■■□□□ 1.04
CLTCL1-212ENST00000622493 WDR7Q9Y4E6 1490 aa21.54■■□□□ 1.04
CLTCL1-212ENST00000622493 GPATCH8Q9UKJ3 1502 aaKnown RBP21.53■■□□□ 1.04
CLTCL1-212ENST00000622493 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.04
CLTCL1-212ENST00000622493 TCOF1Q13428 1488 aaKnown RBP21.52■■□□□ 1.04
CLTCL1-212ENST00000622493 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.03
CLTCL1-212ENST00000622493 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
CLTCL1-212ENST00000622493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.49■■□□□ 1.03
CLTCL1-212ENST00000622493 CDC42BPAQ5VT25 1732 aa21.48■■□□□ 1.03
CLTCL1-212ENST00000622493 KCNH8Q96L42 1107 aa21.48■■□□□ 1.03
CLTCL1-212ENST00000622493 CFDP1Q9UEE9 299 aaPredicted RBP21.48■■□□□ 1.03
CLTCL1-212ENST00000622493 TTC37Q6PGP7 1564 aa21.45■■□□□ 1.02
CLTCL1-212ENST00000622493 MAPKBP1O60336 1514 aa21.44■■□□□ 1.02
CLTCL1-212ENST00000622493 PREX2Q70Z35 1606 aa21.43■■□□□ 1.02
CLTCL1-212ENST00000622493 MYO5CQ9NQX4 1742 aa21.42■■□□□ 1.02
CLTCL1-212ENST00000622493 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
CLTCL1-212ENST00000622493 CDC42BPBQ9Y5S2 1711 aa21.4■■□□□ 1.02
CLTCL1-212ENST00000622493 PLCH2O75038 1416 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms