RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 CHD1O14646 1710 aa27.24■■□□□ 1.95
FAM3A-222ENST00000621967 GOLGA3Q08378 1498 aa27.23■■□□□ 1.95
FAM3A-222ENST00000621967 UBTFP17480 764 aaKnown RBP27.13■■□□□ 1.93
FAM3A-222ENST00000621967 CEP170Q5SW79 1584 aa27.08■■□□□ 1.93
FAM3A-222ENST00000621967 NUP160Q12769 1436 aa27.07■■□□□ 1.92
FAM3A-222ENST00000621967 TNIKQ9UKE5 1360 aa27.07■■□□□ 1.92
FAM3A-222ENST00000621967 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
FAM3A-222ENST00000621967 CTTNBP2Q8WZ74 1663 aa27.04■■□□□ 1.92
FAM3A-222ENST00000621967 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
FAM3A-222ENST00000621967 KIAA0586Q9BVV6 1533 aa26.98■■□□□ 1.91
FAM3A-222ENST00000621967 IQGAP2Q13576 1575 aa26.96■■□□□ 1.91
FAM3A-222ENST00000621967 CLASP1Q7Z460 1538 aa26.92■■□□□ 1.9
FAM3A-222ENST00000621967 RANGAP1P46060 587 aaPredicted RBP26.87■■□□□ 1.89
FAM3A-222ENST00000621967 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
FAM3A-222ENST00000621967 UGGT2Q9NYU1 1516 aa26.8■■□□□ 1.88
FAM3A-222ENST00000621967 SHROOM2Q13796 1616 aa26.78■■□□□ 1.88
FAM3A-222ENST00000621967 CLIP1P30622 1438 aa26.76■■□□□ 1.87
FAM3A-222ENST00000621967 EFCAB5A4FU69 1503 aa26.73■■□□□ 1.87
FAM3A-222ENST00000621967 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
FAM3A-222ENST00000621967 SAMD9Q5K651 1589 aa26.71■■□□□ 1.87
FAM3A-222ENST00000621967 CARMIL2Q6F5E8 1435 aa26.7■■□□□ 1.87
FAM3A-222ENST00000621967 KIAA0556O60303 1618 aa26.69■■□□□ 1.86
FAM3A-222ENST00000621967 DISP1Q96F81 1524 aa26.69■■□□□ 1.86
FAM3A-222ENST00000621967 ARHGAP35Q9NRY4 1499 aa26.68■■□□□ 1.86
FAM3A-222ENST00000621967 P3H3Q8IVL6 736 aa26.65■■□□□ 1.86
FAM3A-222ENST00000621967 ERCC6L2Q5T890 1561 aa26.63■■□□□ 1.85
FAM3A-222ENST00000621967 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
FAM3A-222ENST00000621967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
FAM3A-222ENST00000621967 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
FAM3A-222ENST00000621967 ARHGEF11O15085 1522 aa26.56■■□□□ 1.84
FAM3A-222ENST00000621967 TTBK1Q5TCY1 1321 aaPredicted RBP26.55■■□□□ 1.84
FAM3A-222ENST00000621967 CCER1Q8TC90 406 aaPredicted RBP26.55■■□□□ 1.84
FAM3A-222ENST00000621967 VPS8Q8N3P4 1428 aa26.5■■□□□ 1.83
FAM3A-222ENST00000621967 RIMBP3CA6NJZ7 1639 aa26.49■■□□□ 1.83
FAM3A-222ENST00000621967 RIMBP3BA6NNM3 1639 aa26.49■■□□□ 1.83
FAM3A-222ENST00000621967 RIMBP3Q9UFD9 1639 aa26.49■■□□□ 1.83
FAM3A-222ENST00000621967 PTPRGP23470 1445 aa26.48■■□□□ 1.83
FAM3A-222ENST00000621967 FMN1Q68DA7 1419 aa26.48■■□□□ 1.83
FAM3A-222ENST00000621967 DNAJC5Q9H3Z4 198 aa26.37■■□□□ 1.81
FAM3A-222ENST00000621967 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
FAM3A-222ENST00000621967 PCF11O94913 1555 aaKnown RBP26.36■■□□□ 1.81
FAM3A-222ENST00000621967 RAPGEF6Q8TEU7 1601 aa26.34■■□□□ 1.81
FAM3A-222ENST00000621967 ABCA8O94911 1581 aa26.33■■□□□ 1.8
FAM3A-222ENST00000621967 CASKIN1Q8WXD9 1431 aa26.32■■□□□ 1.8
FAM3A-222ENST00000621967 UACAQ9BZF9 1416 aa26.32■■□□□ 1.8
FAM3A-222ENST00000621967 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
FAM3A-222ENST00000621967 FYCO1Q9BQS8 1478 aa26.31■■□□□ 1.8
FAM3A-222ENST00000621967 HECW1Q76N89 1606 aa26.3■■□□□ 1.8
FAM3A-222ENST00000621967 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
FAM3A-222ENST00000621967 ABCC2Q92887 1545 aa26.28■■□□□ 1.8
FAM3A-222ENST00000621967 UHRF1BP1LA0JNW5 1464 aa26.24■■□□□ 1.79
FAM3A-222ENST00000621967 NUP153P49790 1475 aaKnown RBP26.24■■□□□ 1.79
FAM3A-222ENST00000621967 ADCY10Q96PN6 1610 aa26.22■■□□□ 1.79
FAM3A-222ENST00000621967 ARID3CA6NKF2 412 aa26.21■■□□□ 1.79
FAM3A-222ENST00000621967 EPRSP07814 1512 aaKnown RBP26.18■■□□□ 1.78
FAM3A-222ENST00000621967 CCDC18Q5T9S5 1454 aa26.18■■□□□ 1.78
FAM3A-222ENST00000621967 APLP2Q06481 763 aa26.18■■□□□ 1.78
FAM3A-222ENST00000621967 LRRIQ1Q96JM4 1722 aa26.16■■□□□ 1.78
FAM3A-222ENST00000621967 HNRNPUL2Q1KMD3 747 aaKnown RBP26.15■■□□□ 1.78
FAM3A-222ENST00000621967 CDK13Q14004 1512 aaKnown RBP26.14■■□□□ 1.78
FAM3A-222ENST00000621967 KDM5BQ9UGL1 1544 aa26.12■■□□□ 1.77
FAM3A-222ENST00000621967 ATP10BO94823 1461 aa26.11■■□□□ 1.77
FAM3A-222ENST00000621967 ZCCHC11Q5TAX3 1644 aaKnown RBP26.1■■□□□ 1.77
FAM3A-222ENST00000621967 NPM1P06748 294 aaKnown RBP eCLIP26.1■■□□□ 1.77
FAM3A-222ENST00000621967 CFAP43Q8NDM7 1665 aa26.1■■□□□ 1.77
FAM3A-222ENST00000621967 TIAM1Q13009 1591 aa26.1■■□□□ 1.77
FAM3A-222ENST00000621967 MAP3K1Q13233 1512 aa26.07■■□□□ 1.76
FAM3A-222ENST00000621967 CDK11AQ9UQ88 783 aaPredicted RBP26.04■■□□□ 1.76
FAM3A-222ENST00000621967 DIEXFQ68CQ4 756 aaKnown RBP26.01■■□□□ 1.75
FAM3A-222ENST00000621967 MTUS2Q5JR59 1369 aa25.99■■□□□ 1.75
FAM3A-222ENST00000621967 PLEKHD1A6NEE1 506 aa25.98■■□□□ 1.75
FAM3A-222ENST00000621967 LRRC9Q6ZRR7 1453 aa25.97■■□□□ 1.75
FAM3A-222ENST00000621967 MAGI3Q5TCQ9 1506 aa25.95■■□□□ 1.74
FAM3A-222ENST00000621967 EHBP1L1Q8N3D4 1523 aa25.95■■□□□ 1.74
FAM3A-222ENST00000621967 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
FAM3A-222ENST00000621967 ASXL2Q76L83 1435 aa25.94■■□□□ 1.74
FAM3A-222ENST00000621967 TROQ12816 1431 aaPredicted RBP25.93■■□□□ 1.74
FAM3A-222ENST00000621967 MAPKBP1O60336 1514 aa25.93■■□□□ 1.74
FAM3A-222ENST00000621967 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
FAM3A-222ENST00000621967 ZNF316A6NFI3 1004 aaPredicted RBP25.9■■□□□ 1.74
FAM3A-222ENST00000621967 RRBP1Q9P2E9 1410 aaKnown RBP25.9■■□□□ 1.74
FAM3A-222ENST00000621967 SCAF1Q9H7N4 1312 aaKnown RBP25.9■■□□□ 1.74
FAM3A-222ENST00000621967 KIF14Q15058 1648 aa25.86■■□□□ 1.73
FAM3A-222ENST00000621967 KCNH8Q96L42 1107 aa25.84■■□□□ 1.73
FAM3A-222ENST00000621967 SUPT6HQ7KZ85 1726 aaKnown RBP25.84■■□□□ 1.73
FAM3A-222ENST00000621967 CLSPNQ9HAW4 1339 aa25.81■■□□□ 1.72
FAM3A-222ENST00000621967 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
FAM3A-222ENST00000621967 ACIN1Q9UKV3 1341 aaKnown RBP25.76■■□□□ 1.71
FAM3A-222ENST00000621967 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
FAM3A-222ENST00000621967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.74■■□□□ 1.71
FAM3A-222ENST00000621967 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
FAM3A-222ENST00000621967 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
FAM3A-222ENST00000621967 DIP2BQ9P265 1576 aa25.72■■□□□ 1.71
FAM3A-222ENST00000621967 ABCA9Q8IUA7 1624 aa25.7■■□□□ 1.71
FAM3A-222ENST00000621967 CCNB3Q8WWL7 1395 aa25.7■■□□□ 1.71
FAM3A-222ENST00000621967 GLI2P10070 1586 aa25.67■■□□□ 1.7
FAM3A-222ENST00000621967 FAM69CQ0P6D2 419 aa25.67■■□□□ 1.7
FAM3A-222ENST00000621967 PHLDB1Q86UU1 1377 aa25.67■■□□□ 1.7
FAM3A-222ENST00000621967 NEUROD1Q13562 356 aa25.67■■□□□ 1.7
FAM3A-222ENST00000621967 MYO5CQ9NQX4 1742 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms